Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g09480 Schrenkiella parvula HOM05D005449 ORTHO05D006916 1.9e-62 242.7 157 100.0
CARHR162730 Cardamine hirsuta HOM05D005449 ORTHO05D006916 1.4e-57 226.5 157 93.6
AL5G33630 Arabidopsis lyrata HOM05D005449 ORTHO05D006916 4.2e-57 224.9 157 76.4
Thhalv10010784m.g Eutrema salsugineum HOM05D005449 ORTHO05D006916 7.2e-57 224.2 157 93.6
Carub.0005s1933 Capsella rubella HOM05D005449 ORTHO05D006916 6.1e-56 221.1 157 90.4
BcaB01g00336 Brassica carinata HOM05D005449 ORTHO05D006916 8.7e-55 217.2 157 90.4
BolC8t50425H Brassica oleracea HOM05D005449 ORTHO05D006916 2.5e-54 215.7 157 89.8
AT3G52860 Arabidopsis thaliana HOM05D005449 ORTHO05D006916 5.7e-54 214.5 122 89.3
A09p45940 Brassica napus HOM05D005449 ORTHO05D006916 1.6e-53 213.0 157 88.5
C08p28130 Brassica napus HOM05D005449 ORTHO05D006916 2.2e-53 212.6 157 87.9
BraA09t40054Z Brassica rapa HOM05D005449 ORTHO05D006916 1.4e-52 209.9 157 86.6
THA.LOC104817488 Tarenaya hassleriana HOM05D005449 ORTHO05D006916 2.4e-36 156.0 132 64.4
CSS0004919 Camellia sinensis var. sinensis HOM05D005449 ORTHO05D006916 7.2e-33 144.4 84 85.7
Rhsim06G0059700 Rhododendron simsii HOM05D005449 ORTHO05D006916 1.2e-32 143.7 84 85.7
DCAR_002842 Daucus carota HOM05D005449 ORTHO05D006916 2.1e-32 142.9 84 85.7
Migut.D00146 Erythranthe guttata HOM05D005449 ORTHO05D006916 2.1e-32 142.9 84 86.9
Duzib138G1099 Durio zibethinus HOM05D005449 ORTHO05D006916 3.6e-32 142.1 84 86.9
COL.COLO4_23333 Corchorus olitorius HOM05D005449 ORTHO05D006916 4.7e-32 141.7 105 74.3
Dinv44016 Davidia involucrata HOM05D005449 ORTHO05D006916 4.7e-32 141.7 84 83.3
Oeu024404.1 Olea europaea HOM05D005449 ORTHO05D006916 4.7e-32 141.7 84 86.9
SGA_v2.0_scaffold1G00359 Striga asiatica HOM05D005449 ORTHO05D006916 4.7e-32 141.7 105 71.4
TAR636G0282 Trochodendron aralioides HOM05D005449 ORTHO05D006916 4.7e-32 141.7 84 84.5
EL10Ac7g17526 Beta vulgaris HOM05D005449 ORTHO05D006916 6.1e-32 141.4 98 75.5
FAN20G1025 Fragaria x ananassa HOM05D005449 ORTHO05D006916 6.1e-32 141.4 84 84.5
Cpa.g.sc9.253 Carica papaya HOM05D005449 ORTHO05D006916 8.0e-32 141.0 95 77.9
Hund11156 Selenicereus undatus HOM05D005449 ORTHO05D006916 8.0e-32 141.0 84 83.3
Thecc.01G301700 Theobroma cacao HOM05D005449 ORTHO05D006916 8.0e-32 141.0 105 74.3
Prupe.8G140700 Prunus persica HOM05D005449 ORTHO05D006916 1.0e-31 140.6 84 83.3
TWI14G0435 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 1.0e-31 140.6 84 84.5
Gohir.A12G129900 Gossypium hirsutum HOM05D005449 ORTHO05D006916 1.4e-31 140.2 105 73.3
Hma1.2p1_1986F.1_g310070 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 1.4e-31 140.2 84 83.3
Hma1.2p1_2044F.1_g312372 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 1.4e-31 140.2 84 83.3
Oeu054120.1 Olea europaea HOM05D005449 ORTHO05D006916 1.4e-31 140.2 84 84.5
RcHm_v2.0_Chr6g0252941 Rosa chinensis HOM05D005449 ORTHO05D006916 1.4e-31 140.2 84 85.7
RcHm_v2.0_Chr6g0252971 Rosa chinensis HOM05D005449 ORTHO05D006916 1.4e-31 140.2 84 84.5
Cfa005902 Carpinus fangiana HOM05D005449 ORTHO05D006916 1.8e-31 139.8 122 65.6
Gohir.D12G133700 Gossypium hirsutum HOM05D005449 ORTHO05D006916 1.8e-31 139.8 105 73.3
Gorai.008G144700 Gossypium raimondii HOM05D005449 ORTHO05D006916 1.8e-31 139.8 105 73.3
Nn3g21512 Nelumbo nucifera HOM05D005449 ORTHO05D006916 1.8e-31 139.8 84 82.1
Lj4g0006553 Lotus japonicus HOM05D005449 ORTHO05D006916 2.3e-31 139.4 95 74.7
Lalb_Chr03g0036381 Lupinus albus HOM05D005449 ORTHO05D006916 2.3e-31 139.4 97 74.2
Potri.014G127900 Populus trichocarpa HOM05D005449 ORTHO05D006916 2.3e-31 139.4 106 70.8
QL12p028306 Quercus lobata HOM05D005449 ORTHO05D006916 2.3e-31 139.4 84 82.1
Duzib211G0575 Durio zibethinus HOM05D005449 ORTHO05D006916 3.0e-31 139.0 105 72.4
FAN15G2928 Fragaria x ananassa HOM05D005449 ORTHO05D006916 3.0e-31 139.0 84 83.3
PGR119G1363 Punica granatum HOM05D005449 ORTHO05D006916 3.0e-31 139.0 97 76.3
Ah.08g213380 Amaranthus hybridus HOM05D005449 ORTHO05D006916 4.0e-31 138.7 103 70.9
Ca_17681_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 4.0e-31 138.7 101 71.3
Ca_29605_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 4.0e-31 138.7 101 71.3
Manes.05G061600 Manihot esculenta HOM05D005449 ORTHO05D006916 4.0e-31 138.7 102 73.5
Dinv33060 Davidia involucrata HOM05D005449 ORTHO05D006916 5.2e-31 138.3 122 64.8
CANSAT25G1565 Cannabis sativa HOM05D005449 ORTHO05D006916 6.7e-31 137.9 122 63.1
FAN27G2298 Fragaria x ananassa HOM05D005449 ORTHO05D006916 6.7e-31 137.9 84 82.1
Phvul.002G266700 Phaseolus vulgaris HOM05D005449 ORTHO05D006916 6.7e-31 137.9 101 72.3
VMungo0251G2862 Vigna mungo HOM05D000587 ORTHO05D000929 6.7e-31 137.9 101 72.3
FvH4_2g03920 Fragaria vesca HOM05D005449 ORTHO05D006916 8.8e-31 137.5 84 83.3
MD05G1096300 Malus domestica HOM05D005449 ORTHO05D006916 8.8e-31 137.5 84 83.3
Sabra14G0095000 Salix brachista HOM05D005449 ORTHO05D006916 8.8e-31 137.5 82 84.1
CiPaw.07G110200 Carya illinoinensis HOM05D005449 ORTHO05D006916 1.5e-30 136.7 84 83.3
Eucgr.F02473 Eucalyptus grandis HOM05D005449 ORTHO05D006916 1.5e-30 136.7 87 79.3
Glyma.05G185600 Glycine max HOM05D005449 ORTHO05D006916 1.5e-30 136.7 101 71.3
Ciclev10022754m.g Citrus clementina HOM05D005449 ORTHO05D006916 2.0e-30 136.3 121 64.5
Cc01_g20940 Coffea canephora HOM05D005449 ORTHO05D006916 2.0e-30 136.3 107 68.2
RcHm_v2.0_Chr4g0408421 Rosa chinensis HOM05D005449 ORTHO05D006916 2.0e-30 136.3 83 81.9
Sed0024679 Sechium edule HOM05D005449 ORTHO05D006916 2.0e-30 136.3 84 82.1
Aqoxy1G00207 Aquilegia oxysepala HOM05D005449 ORTHO05D006916 2.6e-30 136.0 101 70.3
TPR.G2165 Trifolium pratense HOM05D005449 ORTHO05D006916 3.3e-30 135.6 83 80.7
MELO3C017987.2 Cucumis melo HOM05D005449 ORTHO05D006916 4.4e-30 135.2 97 72.2
Glyma.08G143600 Glycine max HOM05D005449 ORTHO05D006916 5.7e-30 134.8 83 80.7
CiPaw.08G094600 Carya illinoinensis HOM05D005449 ORTHO05D006916 7.5e-30 134.4 84 78.6
CsaV3_4G000480 Cucumis sativus L. HOM05D005449 ORTHO05D006916 7.5e-30 134.4 106 68.9
FAN22G2041 Fragaria x ananassa HOM05D005449 ORTHO05D006916 7.5e-30 134.4 83 80.7
PSO675G2222 Papaver somniferum HOM05D005449 ORTHO05D006916 7.5e-30 134.4 87 75.9
Psat7g049640 Pisum sativum HOM05D005449 ORTHO05D006916 7.5e-30 134.4 83 79.5
Atru.chr5.1135 Acer truncatum HOM05D005449 ORTHO05D006916 9.7e-30 134.0 123 63.4
FvH4_4g11510 Fragaria vesca HOM05D005449 ORTHO05D006916 1.3e-29 133.7 83 79.5
FAN07G2516 Fragaria x ananassa HOM05D005449 ORTHO05D006916 2.2e-29 132.9 83 79.5
RcHm_v2.0_Chr6g0264541 Rosa chinensis HOM05D005449 ORTHO05D006916 2.2e-29 132.9 82 81.7
Lsat_1_v5_gn_8_164201 Lactuca sativa HOM05D005449 ORTHO05D006916 2.8e-29 132.5 107 67.3
Medtr8g092180 Medicago truncatula HOM05D005449 ORTHO05D006916 2.8e-29 132.5 116 65.5
GSVIVG01028030001 Vitis vinifera HOM05D005449 ORTHO05D006916 2.8e-29 132.5 76 88.2
Actinidia21206 Actinidia chinensis HOM05D005449 ORTHO05D006916 3.7e-29 132.1 84 79.8
CDE05G2918 Ceratophyllum demersum HOM05D005449 ORTHO05D006916 3.7e-29 132.1 111 66.7
ECA236G0849 Erigeron canadensis HOM05D005449 ORTHO05D006916 3.7e-29 132.1 98 70.4
HanXRQChr06g0163691 Helianthus annuus HOM05D005449 ORTHO05D006916 4.8e-29 131.7 89 75.3
Nitab4.5_0008438g0020 Nicotiana tabacum HOM05D005449 ORTHO05D006916 6.3e-29 131.3 93 74.2
TWI59G1340 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 1.4e-28 130.2 84 78.6
MBI18_g24865_MAGBIO Magnolia biondii HOM05D005449 ORTHO05D006916 5.3e-28 128.3 112 67.0
Solyc08g074670.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 5.3e-28 128.3 107 65.4
Sopen08g023260 Solanum pennellii HOM05D005449 ORTHO05D006916 5.3e-28 128.3 107 65.4
MSTRG.21637 Avicennia marina HOM05D005449 ORTHO05D006916 7.0e-28 127.9 123 61.8
HPP92_010681 Vanilla planifolia HOM05D005449 ORTHO05D006916 9.1e-28 127.5 117 61.5
arahy.Tifrunner.gnm1.ann1.X8E93Z Arachis hypogaea HOM05D005449 ORTHO05D006916 1.2e-27 127.1 83 77.1
arahy.Tifrunner.gnm1.ann1.YB8ZH2 Arachis hypogaea HOM05D005449 ORTHO05D006916 1.2e-27 127.1 83 77.1
PGSC0003DMG400018921 Solanum tuberosum HOM05D005449 ORTHO05D006916 1.6e-27 126.7 107 64.5
vmacro09952 Vaccinium macrocarpon HOM05D005449 ORTHO05D006916 1.6e-27 126.7 130 57.7
ATR0582G023 Amborella trichopoda HOM05D005449 ORTHO05D006916 2.0e-27 126.3 84 73.8
CAN.G857.16 Capsicum annuum HOM05D005449 ORTHO05D006916 2.0e-27 126.3 103 65.0
Peaxi162Scf00045g01343 Petunia axillaris HOM05D005449 ORTHO05D006916 2.7e-27 125.9 93 69.9
ClCG10G010560 Citrullus lanatus HOM05D005449 ORTHO05D006916 3.5e-27 125.6 118 61.9
Solyc08g005920.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 1.0e-26 124.0 93 72.0
unitig_26.g10174 Utricularia gibba HOM05D005449 ORTHO05D006916 1.0e-26 124.0 121 62.8
Os05g0154900 Oryza sativa ssp. japonica HOM05D005449 ORTHO05D006916 1.3e-26 123.6 115 61.7
Sopen08g001890 Solanum pennellii HOM05D005449 ORTHO05D006916 1.7e-26 123.2 93 71.0
Rhsim09G0186400 Rhododendron simsii HOM05D005449 ORTHO05D006916 2.9e-26 122.5 133 57.9
PGSC0003DMG400004469 Solanum tuberosum HOM05D005449 ORTHO05D006916 5.0e-26 121.7 93 71.0
Nitab4.5_0002276g0010 Nicotiana tabacum HOM05D005449 ORTHO05D006916 8.5e-26 120.9 119 61.3
Peaxi162Scf00445g00079 Petunia axillaris HOM05D005449 ORTHO05D006916 1.1e-25 120.6 119 60.5
Sc04g0009560 Simmondsia chinensis HOM05D005449 ORTHO05D006916 2.5e-25 119.4 118 58.5
Lsat_1_v5_gn_7_53001 Lactuca sativa HOM05D005449 ORTHO05D006916 3.2e-25 119.0 122 59.0
HanXRQChr06g0163731 Helianthus annuus HOM05D005449 ORTHO05D006916 4.2e-25 118.6 81 75.3
HanXRQChr10g0316901 Helianthus annuus HOM05D005449 ORTHO05D006916 1.6e-24 116.7 99 62.6
Zm00001eb346090 Zea mays HOM05D005449 ORTHO05D006916 1.6e-24 116.7 114 60.5
Nitab4.5_0000860g0030 Nicotiana tabacum HOM05D005449 ORTHO05D006916 2.1e-24 116.3 93 67.7
Pp3c14_5880 Physcomitrium patens HOM05D005449 ORTHO05D006916 6.1e-24 114.8 83 67.5
SEGI_14448 Sequoiadendron giganteum HOM05D005449 ORTHO05D006916 8.0e-24 114.4 86 66.3
FvH4_7g29690 Fragaria vesca HOM05D005449 ORTHO05D006916 1.8e-23 113.2 74 75.7
AUR62008679 Chenopodium quinoa HOM05D005449 ORTHO05D006916 1.5e-22 110.2 83 69.9
SMO367G0046 Selaginella moellendorffii HOM05D005449 ORTHO05D006916 2.8e-21 105.9 85 60.0
PSO675G2923 Papaver somniferum HOM05D005449 ORTHO05D006916 2.4e-20 102.8 74 67.6
BcaC07g39651 Brassica carinata HOM05D001272 ORTHO05D001843 1.3e-18 97.1 85 90.6
AUR62025565 Chenopodium quinoa HOM05D005449 ORTHO05D006916 3.8e-18 95.5 116 53.4
Mapoly0162s0020 Marchantia polymorpha HOM05D005449 ORTHO05D006916 1.9e-17 93.2 82 56.1
AagrBONN_evm.TU.Sc2ySwM_117.989 Anthoceros agrestis HOM05D005449 ORTHO05D006916 6.1e-16 88.2 92 52.2
Ciclev10033890m.g Citrus clementina HOM05D005449 ORTHO05D006916 3.0e-15 85.9 115 48.7
Haze_04950 Corylus avellana HOM05D005449 ORTHO05D006916 2.0e-14 83.2 49 85.7
Zm00001eb085090 Zea mays HOM05D005449 ORTHO05D006916 4.4e-14 82.0 112 45.5
Atru.chr11.2437 Acer truncatum HOM05D005449 ORTHO05D006916 2.2e-13 79.7 111 42.3
MD10G1102600 Malus domestica HOM05D005449 ORTHO05D006916 6.3e-13 78.2 51 76.5
Zm00001eb340530 Zea mays HOM05D005449 ORTHO05D006916 8.3e-13 77.8 92 50.0
Aa31LG10G7880 Aethionema arabicum HOM05D005449 ORTHO05D006916 4.5e-11 72.0 74 86.5
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 2.5e-09 66.2 46 67.4
FAN17G0623 Fragaria x ananassa HOM05D005449 ORTHO05D006916 9.5e-09 64.3 34 85.3
Actinidia07783 Actinidia chinensis HOM05D005449 ORTHO05D006916 2.1e-08 63.2 39 84.6
BcaB02g10173 Brassica carinata HOM05D005449 ORTHO05D006916 3.0e-07 59.3 43 74.4
Hma1.2p1_0494F.1_g165230 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 5.2e-07 58.5 33 78.8
A07p21230 Brassica napus HOM05D005449 ORTHO05D027985 8.9e-07 57.8 37 75.7
BraA07t29810Z Brassica rapa HOM05D005449 ORTHO05D027985 8.9e-07 57.8 37 75.7
C06p20730 Brassica napus HOM05D005449 ORTHO05D027985 4.4e-06 55.5 37 73.0
BolC6t37256H Brassica oleracea HOM05D005449 ORTHO05D027985 4.4e-06 55.5 37 73.0


User provided reference genes

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