Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g07820 Schrenkiella parvula HOM05D003578 ORTHO05D004021 3.8e-281 971.1 575 100.0
Thhalv10010243m.g Eutrema salsugineum HOM05D003578 ORTHO05D004021 6.3e-236 820.8 572 80.9
C08p29780 Brassica napus HOM05D003578 ORTHO05D004021 6.6e-233 810.8 570 80.2
BcaC07g39801 Brassica carinata HOM05D003578 ORTHO05D004021 1.9e-232 809.3 570 80.5
BolC8t50589H Brassica oleracea HOM05D003578 ORTHO05D004021 7.2e-232 807.4 570 80.2
A09p47580 Brassica napus HOM05D003578 ORTHO05D004021 4.5e-226 788.1 570 79.5
BraA09t40214Z Brassica rapa HOM05D003578 ORTHO05D004021 1.3e-225 786.6 570 79.5
BcaB02g07728 Brassica carinata HOM05D003578 ORTHO05D004021 1.9e-211 739.6 574 70.9
AL5G35710 Arabidopsis lyrata HOM05D003578 ORTHO05D004021 1.6e-210 736.5 571 71.8
Aa31LG8G7140 Aethionema arabicum HOM05D003578 ORTHO05D004021 2.1e-210 736.1 572 69.4
BolC6t37412H Brassica oleracea HOM05D003578 ORTHO05D004021 1.3e-209 733.4 573 72.8
CARHR164540 Cardamine hirsuta HOM05D003578 ORTHO05D004021 1.4e-206 723.4 573 69.3
BcaC08g44691 Brassica carinata HOM05D003578 ORTHO05D004021 5.2e-206 721.5 564 70.7
BcaB01g00173 Brassica carinata HOM05D003578 ORTHO05D004021 1.2e-205 720.3 571 72.3
AT3G54630 Arabidopsis thaliana HOM05D003578 ORTHO05D004021 3.9e-201 705.3 572 71.7
Carub.0005s2123 Capsella rubella HOM05D003578 ORTHO05D004021 8.1e-199 697.6 569 67.0
Aa31LG2G6060 Aethionema arabicum HOM05D003578 ORTHO05D004021 4.2e-195 685.3 574 64.5
C06p22270 Brassica napus HOM05D003578 ORTHO05D004021 3.5e-186 655.6 564 66.3
THA.LOC104824162 Tarenaya hassleriana HOM05D003578 ORTHO05D004021 9.0e-174 614.4 575 57.2
Cpa.g.sc2.28 Carica papaya HOM05D003578 ORTHO05D004021 2.1e-138 496.9 575 50.1
Duzib132G0407 Durio zibethinus HOM05D003578 ORTHO05D004021 2.8e-127 459.9 547 46.4
TWI23G0776 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 2.7e-125 453.4 541 47.0
TWI14G0091 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 7.2e-123 445.3 548 46.7
Atru.chr6.1000 Acer truncatum HOM05D003578 ORTHO05D004021 9.4e-123 444.9 576 44.3
Gohir.A03G210700 Gossypium hirsutum HOM05D003578 ORTHO05D004021 1.2e-122 444.5 577 44.5
Ciclev10007743m.g Citrus clementina HOM05D003578 ORTHO05D004021 4.7e-122 442.6 539 44.5
CiPaw.06G150300 Carya illinoinensis HOM05D003578 ORTHO05D004021 1.5e-120 437.6 579 44.0
Prupe.1G564000 Prunus persica HOM05D003578 ORTHO05D004021 7.5e-120 435.3 575 43.3
Gohir.A01G176500 Gossypium hirsutum HOM05D003578 ORTHO05D004021 1.1e-118 431.4 550 45.1
Gorai.002G207800 Gossypium raimondii HOM05D003578 ORTHO05D004021 1.1e-118 431.4 543 45.1
Thecc.02G041600 Theobroma cacao HOM05D003578 ORTHO05D004021 1.6e-117 427.6 547 45.9
Cfa005568 Carpinus fangiana HOM05D003578 ORTHO05D004021 2.0e-117 427.2 554 44.0
Potri.001G208700 Populus trichocarpa HOM05D003578 ORTHO05D004021 1.1e-115 421.4 574 43.0
CSS0023378 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 4.7e-114 416.0 520 45.0
Ca_00092_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 1.2e-112 411.4 539 42.5
Ca_29931_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 1.2e-112 411.4 539 42.5
MD15G1419200 Malus domestica HOM05D003578 ORTHO05D004021 1.2e-112 411.4 575 40.9
Eucgr.G00633 Eucalyptus grandis HOM05D003578 ORTHO05D004021 1.7e-111 407.5 541 41.0
Haze_10786 Corylus avellana HOM05D003578 ORTHO05D004021 2.9e-111 406.8 591 40.4
Actinidia39059 Actinidia chinensis HOM05D003578 ORTHO05D004021 4.9e-111 406.0 577 40.4
MBI06_g22317_MAGBIO Magnolia biondii HOM05D003578 ORTHO05D004021 3.2e-110 403.3 545 41.7
Gohir.D02G232300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 1.7e-108 397.5 577 42.6
Glyma.15G048000 Glycine max HOM05D003578 ORTHO05D004021 2.3e-108 397.1 562 41.8
Gorai.005G260100 Gossypium raimondii HOM05D003578 ORTHO05D004021 3.9e-108 396.4 577 42.5
CANSAT11G1197 Cannabis sativa HOM05D003578 ORTHO05D004021 6.6e-108 395.6 574 41.3
FAN18G4487 Fragaria x ananassa HOM05D003578 ORTHO05D004021 2.5e-107 393.7 569 41.7
Sabra01G0161000 Salix brachista HOM05D003578 ORTHO05D004021 3.3e-107 393.3 652 38.3
CSS0005813 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 5.6e-107 392.5 587 41.1
Dinv19347 Davidia involucrata HOM05D003578 ORTHO05D004021 5.6e-107 392.5 580 40.5
FAN13G2947 Fragaria x ananassa HOM05D003578 ORTHO05D004021 5.6e-107 392.5 560 42.3
Oeu000197.1 Olea europaea HOM05D003578 ORTHO05D004021 5.6e-107 392.5 569 41.7
SHI16565 Sapria himalayana HOM05D003578 ORTHO05D004021 5.6e-107 392.5 545 40.7
Nitab4.5_0009907g0020 Nicotiana tabacum HOM05D003578 ORTHO05D004021 9.5e-107 391.7 537 46.2
FvH4_5g35831 Fragaria vesca HOM05D003578 ORTHO05D004021 1.2e-106 391.3 543 42.7
Nitab4.5_0003071g0040 Nicotiana tabacum HOM05D003578 ORTHO05D004021 2.1e-106 390.6 537 43.8
GSVIVG01023023001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.1e-106 390.6 569 41.5
Rhsim11G0132000 Rhododendron simsii HOM05D003578 ORTHO05D004021 3.6e-106 389.8 597 38.9
FAN08G2591 Fragaria x ananassa HOM05D003578 ORTHO05D004021 6.2e-106 389.0 560 42.1
PGR042G1741 Punica granatum HOM05D003578 ORTHO05D004021 1.4e-105 387.9 549 41.3
VMungo0540G1591 Vigna mungo HOM05D003578 ORTHO05D004021 2.3e-105 387.1 558 40.7
Lj1g0024840 Lotus japonicus HOM05D003578 ORTHO05D004021 3.1e-105 386.7 535 41.9
Lj6g0021493 Lotus japonicus HOM05D003578 ORTHO05D004021 2.6e-104 383.6 539 41.4
Medtr2g028550 Medicago truncatula HOM05D003578 ORTHO05D004021 3.4e-104 383.3 536 39.9
PSO266G0076 Papaver somniferum HOM05D003578 ORTHO05D004021 4.4e-104 382.9 558 41.0
Cc02_g22230 Coffea canephora HOM05D003578 ORTHO05D004021 1.3e-103 381.3 540 40.9
Phvul.006G211900 Phaseolus vulgaris HOM05D003578 ORTHO05D004021 3.7e-103 379.8 558 41.2
MSTRG.16537 Avicennia marina HOM05D003578 ORTHO05D004021 4.9e-103 379.4 572 41.1
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.1e-102 378.3 569 41.3
FAN04G0507 Fragaria x ananassa HOM05D003578 ORTHO05D004021 2.7e-101 373.6 559 42.6
PSO478G2549 Papaver somniferum HOM05D003578 ORTHO05D004021 7.8e-101 372.1 555 38.7
RcHm_v2.0_Chr5g0046031 Rosa chinensis HOM05D003578 ORTHO05D004021 7.8e-101 372.1 573 40.5
Sc20g0004020 Simmondsia chinensis HOM05D003578 ORTHO05D004021 7.8e-101 372.1 560 37.3
SGA_v2.0_scaffold1G00330 Striga asiatica HOM05D003578 ORTHO05D004021 7.8e-101 372.1 571 39.6
Migut.B00662 Erythranthe guttata HOM05D003578 ORTHO05D004021 1.3e-100 371.3 548 45.4
PSO478G5278 Papaver somniferum HOM05D003578 ORTHO05D004021 1.3e-100 371.3 558 39.8
TPR.G17513 Trifolium pratense HOM05D003578 ORTHO05D004021 5.0e-100 369.4 538 38.7
Sed0026866 Sechium edule HOM05D003578 ORTHO05D004021 1.1e-99 368.2 583 38.9
Aqoxy7G03367 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.2e-98 364.8 550 39.5
Manes.07G012900 Manihot esculenta HOM05D003578 ORTHO05D004021 3.1e-97 360.1 456 44.1
Peaxi162Scf00011g01125 Petunia axillaris HOM05D003578 ORTHO05D004021 3.1e-97 360.1 536 43.3
MELO3C006920.2 Cucumis melo HOM05D003578 ORTHO05D004021 1.2e-96 358.2 540 39.4
PSO017G3053 Papaver somniferum HOM05D003578 ORTHO05D004021 1.5e-96 357.8 524 38.2
QL11p018835 Quercus lobata HOM05D003578 ORTHO05D004021 2.0e-96 357.5 575 39.0
ClCG05G009820 Citrullus lanatus HOM05D003578 ORTHO05D004021 2.9e-95 353.6 546 37.9
AUR62033619 Chenopodium quinoa HOM05D003578 ORTHO05D004021 3.7e-95 353.2 542 37.5
CsaV3_3G018800 Cucumis sativus L. HOM05D003578 ORTHO05D004021 3.2e-94 350.1 540 37.8
Nn1g08568 Nelumbo nucifera HOM05D003578 ORTHO05D004021 4.1e-94 349.7 470 43.2
Hund15694 Selenicereus undatus HOM05D003578 ORTHO05D004021 4.1e-94 349.7 546 35.7
MD08G1226900 Malus domestica HOM05D003578 ORTHO05D004021 5.4e-94 349.4 460 42.4
arahy.Tifrunner.gnm1.ann1.FVSM65 Arachis hypogaea HOM05D003578 ORTHO05D004021 7.1e-94 349.0 579 38.2
arahy.Tifrunner.gnm1.ann1.H2X3VG Arachis hypogaea HOM05D003578 ORTHO05D004021 7.1e-94 349.0 579 38.9
AUR62038607 Chenopodium quinoa HOM05D003578 ORTHO05D004021 9.2e-94 348.6 545 37.1
SGA_v2.0_scaffold110G31277 Striga asiatica HOM05D003578 ORTHO05D004021 2.1e-93 347.4 544 39.3
ECA238G3381 Erigeron canadensis HOM05D003578 ORTHO05D004021 4.6e-93 346.3 553 37.4
COL.COLO4_33122 Corchorus olitorius HOM05D003578 ORTHO05D004021 1.3e-92 344.7 541 40.7
arahy.Tifrunner.gnm1.ann1.0E6AR9 Arachis hypogaea HOM05D003578 ORTHO05D004021 3.0e-92 343.6 579 38.7
Aqoxy2G04052 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.9e-91 340.9 550 39.6
Lsat_1_v5_gn_9_116440 Lactuca sativa HOM05D003578 ORTHO05D004021 1.9e-86 324.3 581 35.8
arahy.Tifrunner.gnm1.ann1.CJK4SJ Arachis hypogaea HOM05D003578 ORTHO05D004021 5.4e-86 322.8 590 36.9
Lalb_Chr20g0123381 Lupinus albus HOM05D003578 ORTHO05D004021 2.7e-85 320.5 547 38.6
Solyc01g104570.4 Solanum lycopersicum HOM05D003578 ORTHO05D004021 1.3e-84 318.2 573 37.0
Sopen01g047080 Solanum pennellii HOM05D003578 ORTHO05D004021 2.3e-84 317.4 573 37.2
Ah.10g033260 Amaranthus hybridus HOM05D003578 ORTHO05D004021 3.9e-84 316.6 538 37.0
CDE10G0634 Ceratophyllum demersum HOM05D003578 ORTHO05D004021 6.6e-84 315.8 534 36.9
CSS0048877 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 8.6e-84 315.5 555 38.2
CAN.G1352.14 Capsicum annuum HOM05D003578 ORTHO05D004021 8.6e-84 315.5 501 39.7
PGSC0003DMG400029761 Solanum tuberosum HOM05D003578 ORTHO05D004021 8.6e-84 315.5 536 38.4
vmacro01788 Vaccinium macrocarpon HOM05D003578 ORTHO05D004021 5.6e-83 312.8 542 36.3
HanXRQChr03g0066191 Helianthus annuus HOM05D003578 ORTHO05D004021 2.8e-82 310.5 547 35.5
unitig_8.g4524 Utricularia gibba HOM05D003578 ORTHO05D004021 2.8e-82 310.5 536 37.1
Lj1C1063G12 Lonicera japonica HOM05D003578 ORTHO05D004021 4.0e-81 306.6 376 46.5
Psat1g170680 Pisum sativum HOM05D003578 ORTHO05D004021 6.8e-81 305.8 440 39.3
arahy.Tifrunner.gnm1.ann1.V2489D Arachis hypogaea HOM05D003578 ORTHO05D004021 2.6e-80 303.9 594 35.2
Oeu026056.1 Olea europaea HOM05D003578 ORTHO05D004021 4.2e-78 296.6 463 39.7
DCAR_029239 Daucus carota HOM05D003578 ORTHO05D004021 9.3e-78 295.4 568 34.2
Gohir.D01G167300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 1.2e-77 295.0 393 42.2
Psat1g170240 Pisum sativum HOM05D003578 ORTHO05D004021 1.9e-75 287.7 447 38.0
arahy.Tifrunner.gnm1.ann1.MNPV6T Arachis hypogaea HOM05D003578 ORTHO05D004021 3.6e-74 283.5 461 39.9
Eucgr.G00629 Eucalyptus grandis HOM05D003578 ORTHO05D004021 4.8e-74 283.1 424 39.4
HanXRQChr03g0066541 Helianthus annuus HOM05D003578 ORTHO05D004021 8.1e-74 282.3 575 33.0
EL10Ac2g02673 Beta vulgaris HOM05D003578 ORTHO05D004021 7.6e-72 275.8 549 32.6
Lsat_1_v5_gn_9_118160 Lactuca sativa HOM05D003578 ORTHO05D004021 2.9e-71 273.9 579 31.6
Nn1g08571 Nelumbo nucifera HOM05D003578 ORTHO05D004021 2.5e-67 260.8 365 41.9
A07p22210 Brassica napus HOM05D003578 ORTHO05D004021 1.4e-62 245.0 160 80.0
HPP92_025499 Vanilla planifolia HOM05D003578 ORTHO05D004021 1.1e-59 235.3 540 33.0
ATR0193G049 Amborella trichopoda HOM05D003578 ORTHO05D004021 5.6e-59 233.0 433 34.6
SEGI_09452 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 1.5e-56 224.9 390 33.1
TAR374G1024 Trochodendron aralioides HOM05D003578 ORTHO05D004021 3.9e-52 210.3 264 42.8
Os08g0468400 Oryza sativa ssp. japonica HOM05D003578 ORTHO05D004021 5.0e-47 193.4 546 28.0
CiPaw.05G040700 Carya illinoinensis HOM05D003578 ORTHO05D004021 5.5e-46 189.9 253 40.3
CiPaw.05G040600 Carya illinoinensis HOM05D003578 ORTHO05D004021 3.9e-44 183.7 254 44.9
SEGI_11795 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 1.3e-42 178.7 315 31.4
GSVIVG01023069001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.0e-40 171.4 228 43.4
Zm00001eb040130 Zea mays HOM05D003578 ORTHO05D004021 1.0e-39 169.1 361 31.0
Aqoxy2G02351 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.7e-37 161.0 329 32.2
SMO254G0006 Selaginella moellendorffii HOM05D003578 ORTHO05D004021 5.7e-35 153.3 459 27.5
CsaV3_3G021940 Cucumis sativus L. HOM05D003578 ORTHO05D004021 4.8e-34 150.2 248 33.9
Mapoly0042s0088 Marchantia polymorpha HOM05D003578 ORTHO05D004021 2.0e-32 144.8 461 25.6
HPP92_025538 Vanilla planifolia HOM05D003578 ORTHO05D004021 3.0e-28 131.0 249 31.3
Pp3c7_8870 Physcomitrium patens HOM05D003578 ORTHO05D004021 1.7e-26 125.2 447 25.1
PRCOL_00003819 Prasinoderma coloniale HOM05D003578 ORTHO05D004021 1.2e-24 119.0 556 21.4
Nn1g00799 Nelumbo nucifera HOM05D003578 ORTHO05D004021 2.9e-23 114.4 181 38.1
Nn7g38101 Nelumbo nucifera HOM05D003578 ORTHO05D004021 2.9e-23 114.4 164 40.2
Aqoxy2G02352 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.1e-22 112.5 146 43.2
Cre02.g098300 Chlamydomonas reinhardtii HOM05D003578 ORTHO05D004021 1.2e-21 109.0 477 22.0
ATR0686G046 Amborella trichopoda HOM05D003578 ORTHO05D004021 2.7e-21 107.8 145 40.7
Actinidia00223 Actinidia chinensis HOM05D003578 ORTHO05D004021 1.8e-20 105.1 156 41.7
arahy.Tifrunner.gnm1.ann1.3K20HM Arachis hypogaea HOM05D003578 ORTHO05D004021 1.7e-18 98.6 176 34.1
CBR_g55876 Chara braunii HOM05D003578 ORTHO05D004021 2.8e-18 97.8 439 21.2
Lsat_1_v5_gn_4_72880 Lactuca sativa HOM05D003578 ORTHO05D004021 2.8e-18 97.8 154 33.8
PGSC0003DMG400023774 Solanum tuberosum HOM05D003578 ORTHO05D004021 1.8e-17 95.1 123 43.9
GSVIVG01023034001 Vitis vinifera HOM05D003578 ORTHO05D004021 5.9e-16 90.1 151 36.4
Lsat_1_v5_gn_4_97940 Lactuca sativa HOM05D003523 ORTHO05D004021 7.7e-16 89.7 76 55.3
GSVIVG01023046001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.3e-15 89.0 151 35.8
Nn1g00803 Nelumbo nucifera HOM05D003578 ORTHO05D004021 2.9e-15 87.8 204 31.9
COL.COLO4_34280 Corchorus olitorius HOM05D003578 ORTHO05D004021 8.5e-15 86.3 95 49.5
CAN.G1352.18 Capsicum annuum HOM05D003578 ORTHO05D004021 1.9e-14 85.1 162 48.8
CsaV3_6G032180 Cucumis sativus L. HOM05D003578 ORTHO05D004021 1.4e-12 79.0 105 40.0
HPP92_026283 Vanilla planifolia HOM05D003578 ORTHO05D004021 1.4e-12 79.0 163 31.9
Solyc01g104520.3 Solanum lycopersicum HOM05D003578 ORTHO05D004021 4.0e-12 77.4 126 42.1
arahy.Tifrunner.gnm1.ann1.0Y2WZB Arachis hypogaea HOM05D003578 ORTHO05D004021 2.0e-11 75.1 140 31.4
Lj1A1063T36 Lonicera japonica HOM05D003578 ORTHO05D004021 5.7e-11 73.6 214 27.1
Zm00001eb226250 Zea mays HOM05D003578 ORTHO05D004021 2.2e-10 71.6 124 31.5
Nn7g38100 Nelumbo nucifera HOM05D003578 ORTHO05D004021 2.8e-10 71.2 131 40.5
Zm00001eb317570 Zea mays HOM05D003578 ORTHO05D004021 4.1e-09 67.4 130 29.2
Lsat_1_v5_gn_3_132221 Lactuca sativa HOM05D003523 ORTHO05D004493 1.6e-08 65.5 75 45.3
MCO01G050 Micromonas commoda HOM05D003578 ORTHO05D004021 2.7e-08 64.7 202 22.8
Nn1g08562 Nelumbo nucifera HOM05D003578 ORTHO05D004021 7.7e-08 63.2 118 33.1
Atru.chr6.1018 Acer truncatum HOM05D003578 ORTHO05D004021 5.5e-06 57.0 53 50.9


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