Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g07690 Schrenkiella parvula HOM05D000855 ORTHO05D002321 4.5e-281 970.7 528 100.0
Sp5g07670 Schrenkiella parvula HOM05D000855 ORTHO05D002321 1.9e-218 762.7 528 83.3
Sp5g07680 Schrenkiella parvula HOM05D000855 ORTHO05D002321 3.7e-166 589.0 560 64.8
Thhalv10010125m.g Eutrema salsugineum HOM05D000855 ORTHO05D002321 1.1e-104 384.8 565 50.8
AL5G35840 Arabidopsis lyrata HOM05D000855 ORTHO05D002321 1.7e-102 377.5 568 50.4
C04p37540 Brassica napus HOM05D000855 ORTHO05D002321 3.1e-88 330.1 559 49.7
C04p37570 Brassica napus HOM05D003892 ORTHO05D004522 3.1e-88 330.1 559 49.7
BcaC02g09702 Brassica carinata HOM05D000855 ORTHO05D002321 3.0e-83 313.5 559 48.3
BolC4t25319H Brassica oleracea HOM05D000855 ORTHO05D002321 1.7e-78 297.7 559 47.0
AL5G35830 Arabidopsis lyrata HOM05D000855 ORTHO05D002321 7.4e-74 282.3 554 44.4
A04p05060 Brassica napus HOM05D000855 ORTHO05D002321 2.4e-72 277.3 560 46.1
A04p05040 Brassica napus HOM05D000855 ORTHO05D002321 5.3e-72 276.2 563 44.6
BraA04t16217Z Brassica rapa HOM05D000855 ORTHO05D002321 1.2e-71 275.0 560 45.5
BcaB02g08459 Brassica carinata HOM05D000855 ORTHO05D002321 3.8e-70 270.0 561 44.7
Thhalv10010166m.g Eutrema salsugineum HOM05D000855 ORTHO05D002321 7.2e-69 265.8 543 42.5
AT3G54760 Arabidopsis thaliana HOM05D000855 ORTHO05D002321 3.2e-61 240.4 581 40.1
Aa31LG11G8110 Aethionema arabicum HOM05D000855 ORTHO05D002321 5.5e-61 239.6 621 39.6
BraA04t16215Z Brassica rapa HOM05D000855 ORTHO05D002321 1.5e-58 231.5 513 43.1
Carub.0002s0696 Capsella rubella HOM05D000855 ORTHO05D002321 1.6e-55 221.5 536 40.1
BolC4t25323H Brassica oleracea HOM05D000855 ORTHO05D002321 5.4e-48 196.4 335 48.4
BcaB02g08462 Brassica carinata HOM05D000855 ORTHO05D002321 5.8e-42 176.4 530 37.4
Carub.0002s0697 Capsella rubella HOM05D000855 ORTHO05D002321 1.1e-37 162.2 572 34.4
Carub.0002s0695 Capsella rubella HOM05D000855 ORTHO05D002321 9.2e-32 142.5 564 34.2
CARHR164710 Cardamine hirsuta HOM05D000855 ORTHO05D002321 4.6e-31 140.2 528 33.9
THA.LOC104827500 Tarenaya hassleriana HOM05D000855 ORTHO05D002321 1.2e-23 115.5 609 29.6
THA.LOC104824224 Tarenaya hassleriana HOM05D000855 ORTHO05D002321 4.4e-18 97.1 641 28.7
CARHR164700 Cardamine hirsuta HOM05D000855 ORTHO05D002321 7.6e-18 96.3 143 46.2
THA.LOC104825235 Tarenaya hassleriana HOM05D000855 ORTHO05D002321 5.1e-14 83.6 618 30.1
BolC4t25322H Brassica oleracea HOM05D000855 ORTHO05D002321 9.6e-13 79.3 80 60.0
Carub.0002s0694 Capsella rubella HOM05D000855 ORTHO05D002321 5.3e-11 73.6 87 50.6


User provided reference genes

Program Settings