Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 1.6e-155 552.7 286 100.0
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 1.2e-142 510.0 286 93.4
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 1.0e-141 506.9 286 93.0
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 3.2e-140 501.9 286 92.7
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 2.1e-139 499.2 286 92.0
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 6.1e-139 497.7 286 93.4
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 6.1e-139 497.7 286 93.4
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 6.1e-139 497.7 286 93.4
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 3.4e-137 491.9 280 92.5
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 1.3e-136 490.0 286 91.6
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 4.1e-135 485.0 289 90.7
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 1.6e-134 483.0 283 91.2
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 1.6e-134 483.0 283 91.2
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 7.7e-134 480.7 288 90.6
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 6.5e-133 477.6 286 89.5
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 3.2e-132 475.3 286 88.8
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 5.7e-129 464.5 286 87.1
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 9.8e-121 437.2 303 77.9
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 1.9e-116 422.9 286 77.6
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 2.3e-109 399.4 286 78.7
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 4.9e-96 355.1 280 65.0
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 4.9e-96 355.1 280 65.0
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 4.1e-95 352.1 235 75.3
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 5.4e-95 351.7 272 68.4
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 1.2e-94 350.5 274 66.1
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 1.2e-94 350.5 280 64.3
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 4.6e-94 348.6 281 65.8
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 6.0e-94 348.2 272 66.5
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 1.0e-93 347.4 270 69.3
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 1.9e-92 343.2 289 63.3
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 2.5e-92 342.8 278 64.4
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 1.6e-91 340.1 276 64.5
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 8.1e-91 337.8 249 67.9
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 3.1e-90 335.9 278 62.9
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 5.2e-90 335.1 269 63.6
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 8.9e-90 334.3 249 67.9
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 1.2e-89 334.0 281 62.3
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 2.0e-89 333.2 249 67.9
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 2.0e-89 333.2 249 68.7
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 2.6e-89 332.8 249 67.9
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 9.9e-89 330.9 288 60.8
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 1.3e-88 330.5 233 70.0
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 1.7e-88 330.1 254 66.5
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 1.7e-88 330.1 274 62.0
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 3.8e-88 328.9 235 69.4
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 3.8e-88 328.9 235 69.4
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 3.8e-88 328.9 248 66.9
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 6.4e-88 328.2 279 62.0
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 6.4e-88 328.2 229 70.7
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 1.4e-87 327.0 274 62.0
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 1.4e-87 327.0 284 62.7
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 1.9e-87 326.6 234 69.2
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 1.9e-87 326.6 294 60.2
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 3.2e-87 325.9 291 59.8
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 4.2e-87 325.5 294 59.2
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 5.4e-87 325.1 271 62.7
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 7.1e-87 324.7 299 58.2
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 7.1e-87 324.7 279 62.4
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 7.1e-87 324.7 289 60.2
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 7.1e-87 324.7 273 62.6
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.6e-86 323.6 257 65.0
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 2.1e-86 323.2 277 61.7
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 2.7e-86 322.8 253 64.0
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 6.0e-86 321.6 234 68.4
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 7.8e-86 321.2 278 59.4
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 1.3e-85 320.5 267 63.3
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 1.3e-85 320.5 299 57.9
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 1.3e-85 320.5 289 59.9
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 2.3e-85 319.7 248 64.9
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 3.0e-85 319.3 289 60.2
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 3.9e-85 318.9 229 69.9
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 8.7e-85 317.8 283 60.1
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 1.9e-84 316.6 252 64.7
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 1.9e-84 316.6 235 65.1
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 1.9e-84 316.6 232 68.1
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 1.9e-84 316.6 232 68.1
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 5.6e-84 315.1 282 59.9
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 2.1e-83 313.2 291 58.4
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 1.4e-82 310.5 250 61.6
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 2.4e-82 309.7 234 66.2
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 9.0e-82 307.8 234 64.5
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 1.2e-81 307.4 234 63.7
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 2.6e-81 306.2 220 69.1
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 4.4e-81 305.4 234 63.2
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 5.8e-81 305.1 296 56.8
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 7.6e-81 304.7 231 65.8
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 7.6e-81 304.7 274 59.1
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 2.2e-80 303.1 263 59.7
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 4.9e-80 302.0 274 58.4
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 4.9e-80 302.0 257 59.1
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 1.2e-78 297.4 229 64.2
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 3.5e-78 295.8 240 62.9
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 3.0e-77 292.7 178 87.1
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 5.1e-77 292.0 238 61.3
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 1.8e-74 283.5 197 76.6
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 6.9e-74 281.6 225 62.2
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 9.9e-73 277.7 229 61.1
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 6.4e-72 275.0 303 50.2
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 5.5e-71 271.9 257 56.4
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 5.1e-69 265.4 252 56.7
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 6.5e-64 248.4 230 56.5
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 1.4e-63 247.3 253 54.2
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 1.4e-58 230.7 180 66.1
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 3.4e-57 226.1 283 48.8
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 3.6e-54 216.1 284 45.4
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 1.4e-45 187.6 139 71.9
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 7.4e-44 181.8 141 60.3
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 9.7e-44 181.4 194 45.9
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 9.7e-44 181.4 205 49.8
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 9.7e-44 181.4 236 41.5
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 9.7e-44 181.4 193 46.6
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 1.0e-40 171.4 192 46.9
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 3.0e-37 159.8 133 58.6
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 1.7e-35 154.1 241 40.7
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 5.0e-32 142.5 87 73.6
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 8.5e-32 141.7 147 55.1
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 2.8e-27 126.7 91 69.2
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 8.5e-24 115.2 98 62.2
Atru.chr6.2294 Acer truncatum HOM05D006484 ORTHO05D008002 7.5e-20 102.1 85 64.7
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 1.3e-16 91.3 59 71.2
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 7.5e-12 75.5 51 64.7
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 1.2e-09 68.2 192 25.0
MD09G1034700 Malus domestica HOM05D006484 ORTHO05D008002 2.0e-09 67.4 86 47.7
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 4.3e-07 59.7 34 79.4


User provided reference genes

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