Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g06820 Schrenkiella parvula HOM05D001463 ORTHO05D001282 4.5e-55 218.0 138 100.0
BcaC07g39895 Brassica carinata HOM05D001463 ORTHO05D001282 2.0e-39 166.0 145 75.9
BcaB02g08404 Brassica carinata HOM05D001463 ORTHO05D001282 3.5e-39 165.2 125 67.2
A04p04330 Brassica napus HOM05D001463 ORTHO05D001282 1.3e-38 163.3 126 65.1
A09p48650 Brassica napus HOM05D001463 ORTHO05D001282 1.3e-38 163.3 140 76.4
BraA04t16144Z Brassica rapa HOM05D001463 ORTHO05D001282 1.3e-38 163.3 126 65.1
BcaC02g09782 Brassica carinata HOM05D001463 ORTHO05D001282 3.8e-38 161.8 145 62.1
BolC8t50722H Brassica oleracea HOM05D001463 ORTHO05D001282 8.5e-38 160.6 139 75.5
C08p30990 Brassica napus HOM05D001463 ORTHO05D001282 7.2e-37 157.5 140 75.0
BcaB01g00071 Brassica carinata HOM05D001463 ORTHO05D001282 2.7e-36 155.6 142 70.4
C04p36660 Brassica napus HOM05D001463 ORTHO05D001282 1.4e-35 153.3 144 59.0
BolC4t25129H Brassica oleracea HOM05D001463 ORTHO05D001282 1.4e-35 153.3 144 59.0
Carub.0005s2241 Capsella rubella HOM05D001463 ORTHO05D001282 1.3e-33 146.7 130 73.1
AL5G36870 Arabidopsis lyrata HOM05D001463 ORTHO05D001282 1.7e-30 136.3 140 70.0
Thhalv10010805m.g Eutrema salsugineum HOM05D001463 ORTHO05D001282 2.1e-28 129.4 142 66.9
AL4G37420 Arabidopsis lyrata HOM05D001463 ORTHO05D001282 3.0e-27 125.6 147 53.7
C04p67640 Brassica napus HOM05D001463 ORTHO05D001282 5.2e-27 124.8 146 55.5
BolC4t28263H Brassica oleracea HOM05D001463 ORTHO05D001282 5.2e-27 124.8 146 55.5
A04p30220 Brassica napus HOM05D001463 ORTHO05D001282 2.6e-26 122.5 146 67.1
BraA04t18486Z Brassica rapa HOM05D001463 ORTHO05D001282 2.6e-26 122.5 146 67.1
BraA09t40317Z Brassica rapa HOM05D001463 ORTHO05D001282 1.3e-25 120.2 98 67.3
AT3G55646 Arabidopsis thaliana HOM05D001463 ORTHO05D001282 3.7e-25 118.6 129 72.9
A05p06550 Brassica napus HOM05D001463 ORTHO05D001282 2.4e-24 115.9 149 51.7
CARHR165710 Cardamine hirsuta HOM05D001463 ORTHO05D001282 1.6e-23 113.2 146 67.8
BcaC02g12118 Brassica carinata HOM05D001463 ORTHO05D001282 5.9e-23 111.3 152 49.3
C04p07650 Brassica napus HOM05D001463 ORTHO05D001282 1.7e-22 109.8 149 49.7
Sp4g22150 Schrenkiella parvula HOM05D001463 ORTHO05D001282 2.9e-22 109.0 152 51.3
BcaB02g09078 Brassica carinata HOM05D001463 ORTHO05D001282 7.3e-21 104.4 152 48.7
BraA05t19624Z Brassica rapa HOM05D001463 ORTHO05D001282 7.3e-21 104.4 157 45.9
BolC4t22381H Brassica oleracea HOM05D001463 ORTHO05D001282 1.2e-20 103.6 157 46.5
CARHR134770 Cardamine hirsuta HOM05D001463 ORTHO05D001282 2.1e-20 102.8 146 51.4
THA.LOC104810063 Tarenaya hassleriana HOM05D001463 ORTHO05D001282 1.0e-19 100.5 151 49.0
BcaB02g09077 Brassica carinata HOM05D001463 ORTHO05D001282 3.1e-19 99.0 144 50.7
Cpa.g.sc19.255 Carica papaya HOM05D001463 ORTHO05D001282 3.7e-17 92.0 152 45.4
Carub.0004s2198 Capsella rubella HOM05D001463 ORTHO05D001282 1.9e-16 89.7 101 61.4
BcaNung07238 Brassica carinata HOM05D001463 ORTHO05D001282 4.1e-16 88.6 149 45.6
AT2G39855 Arabidopsis thaliana HOM05D001463 ORTHO05D001282 7.0e-16 87.8 95 53.7
Haze_17151 Corylus avellana HOM05D001463 ORTHO05D001282 2.7e-15 85.9 157 42.0
Thhalv10017636m.g Eutrema salsugineum HOM05D001463 ORTHO05D001282 6.0e-15 84.7 102 58.8
Manes.08G082200 Manihot esculenta HOM05D001463 ORTHO05D001282 9.5e-13 77.4 154 35.7
Potri.010G196400 Populus trichocarpa HOM05D001463 ORTHO05D001282 9.5e-13 77.4 151 37.7
BcaB02g09079 Brassica carinata HOM05D001463 ORTHO05D001282 1.6e-12 76.6 101 52.5
Glyma.02G252500 Glycine max HOM05D001463 ORTHO05D001282 1.6e-12 76.6 147 41.5
CiPaw.02G188100 Carya illinoinensis HOM05D001463 ORTHO05D001282 6.2e-12 74.7 165 35.2
QL07p028303 Quercus lobata HOM05D001463 ORTHO05D001282 1.1e-11 73.9 155 34.8
Cc02_g07230 Coffea canephora HOM05D001463 ORTHO05D001282 1.4e-11 73.6 154 35.7
CiPaw.01G293300 Carya illinoinensis HOM05D001463 ORTHO05D001282 1.8e-11 73.2 157 38.9
QL08p062024 Quercus lobata HOM05D001463 ORTHO05D001282 2.3e-11 72.8 150 39.3
Potri.008G061700 Populus trichocarpa HOM05D001463 ORTHO05D001282 5.2e-11 71.6 145 37.2
Phvul.001G238300 Phaseolus vulgaris HOM05D001463 ORTHO05D001282 1.2e-10 70.5 154 36.4
Manes.09G098500 Manihot esculenta HOM05D001463 ORTHO05D001282 2.6e-10 69.3 158 33.5
Sabra08G0045300 Salix brachista HOM05D001463 ORTHO05D001282 2.6e-10 69.3 141 37.6
CANSAT35G0720 Cannabis sativa HOM05D001463 ORTHO05D001282 4.9e-09 65.1 155 32.9
Cfa017303 Carpinus fangiana HOM05D001463 ORTHO05D001282 4.9e-09 65.1 146 32.9
Lalb_Chr19g0125021 Lupinus albus HOM05D001463 ORTHO05D001282 4.9e-09 65.1 156 34.6
PGR044G2554 Punica granatum HOM05D001463 ORTHO05D001282 8.3e-09 64.3 123 36.6
CiPaw.09G201400 Carya illinoinensis HOM05D001463 ORTHO05D001282 1.1e-08 63.9 159 30.8
Dinv16275 Davidia involucrata HOM05D001463 ORTHO05D001282 1.1e-08 63.9 165 34.5
Gohir.A05G302600 Gossypium hirsutum HOM05D001463 ORTHO05D001282 1.1e-08 63.9 163 32.5
TAR623G0111 Trochodendron aralioides HOM05D001463 ORTHO05D001282 1.1e-08 63.9 157 33.8
Manes.07G122500 Manihot esculenta HOM05D001463 ORTHO05D001282 1.9e-08 63.2 150 36.0
Eucgr.J00967 Eucalyptus grandis HOM05D001463 ORTHO05D001282 2.4e-08 62.8 161 33.5
Gohir.A10G225400 Gossypium hirsutum HOM05D001463 ORTHO05D001282 2.4e-08 62.8 146 35.6
GSVIVG01016436001 Vitis vinifera HOM05D001463 ORTHO05D001282 2.4e-08 62.8 162 38.3
Duzib106G1514 Durio zibethinus HOM05D001463 ORTHO05D001282 4.1e-08 62.0 159 33.3
Ca_05913_v3 Cicer arietinum L. HOM05D001463 ORTHO05D001282 5.4e-08 61.6 157 37.6
HanXRQChr06g0177681 Helianthus annuus HOM05D001463 ORTHO05D001282 7.1e-08 61.2 154 37.0
MD04G1139000 Malus domestica HOM05D001463 ORTHO05D001282 7.1e-08 61.2 162 34.6
Hund04907 Selenicereus undatus HOM05D001463 ORTHO05D001282 7.1e-08 61.2 148 31.8
Thecc.05G028900 Theobroma cacao HOM05D001463 ORTHO05D001282 7.1e-08 61.2 162 32.1
MSTRG.8288 Avicennia marina HOM05D001463 ORTHO05D001282 9.2e-08 60.8 154 35.7
THA.LOC104827030 Tarenaya hassleriana HOM05D001463 ORTHO05D001282 9.2e-08 60.8 164 36.0
AT5G02020 Arabidopsis thaliana HOM05D001463 ORTHO05D001282 1.2e-07 60.5 151 32.5
Carub.0006s0087 Capsella rubella HOM05D001463 ORTHO05D001282 1.2e-07 60.5 127 39.4
CiPaw.10G149400 Carya illinoinensis HOM05D001463 ORTHO05D001282 1.2e-07 60.5 139 32.4
arahy.Tifrunner.gnm1.ann1.1EL8LN Arachis hypogaea HOM05D001463 ORTHO05D001282 1.6e-07 60.1 156 30.8
MELO3C026564.2 Cucumis melo HOM05D001463 ORTHO05D001282 1.6e-07 60.1 152 35.5
Sabra10G0151000 Salix brachista HOM05D001463 ORTHO05D001282 1.6e-07 60.1 145 34.5
Sed0005026 Sechium edule HOM05D001463 ORTHO05D001282 1.6e-07 60.1 158 31.6
THA.LOC104816242 Tarenaya hassleriana HOM05D001463 ORTHO05D001282 1.6e-07 60.1 150 39.3
Manes.02G126600 Manihot esculenta HOM05D001463 ORTHO05D001282 2.1e-07 59.7 163 33.1
Psat0s558g0040 Pisum sativum HOM05D001463 ORTHO05D001282 2.1e-07 59.7 158 32.9
CSS0026065 Camellia sinensis var. sinensis HOM05D001463 ORTHO05D001282 2.7e-07 59.3 160 35.0
Cpa.g.sc56.61 Carica papaya HOM05D001463 ORTHO05D001282 2.7e-07 59.3 167 29.9
Gorai.001G113400 Gossypium raimondii HOM05D001463 ORTHO05D001282 2.7e-07 59.3 156 32.1
Thecc.09G312500 Theobroma cacao HOM05D001463 ORTHO05D001282 2.7e-07 59.3 161 34.8
ECA238G2806 Erigeron canadensis HOM05D001463 ORTHO05D001282 3.5e-07 58.9 156 34.6
Peaxi162Scf00975g10014 Petunia axillaris HOM05D001463 ORTHO05D001282 3.5e-07 58.9 153 34.0
Sc11g0007610 Simmondsia chinensis HOM05D001463 ORTHO05D001282 3.5e-07 58.9 154 39.6
VMungo1383G2188 Vigna mungo HOM05D001463 ORTHO05D001282 3.5e-07 58.9 147 32.0
arahy.Tifrunner.gnm1.ann1.DI08LN Arachis hypogaea HOM05D001463 ORTHO05D001282 4.6e-07 58.5 124 33.9
BcaNung04459 Brassica carinata HOM05D001463 ORTHO05D001282 4.6e-07 58.5 111 39.6
BcaNung05702 Brassica carinata HOM05D001463 ORTHO05D001282 4.6e-07 58.5 111 39.6
CANSAT54G2006 Cannabis sativa HOM05D001463 ORTHO05D001282 4.6e-07 58.5 164 33.5
AUR62020062 Chenopodium quinoa HOM05D001463 ORTHO05D001282 4.6e-07 58.5 156 32.7
FvH4_7g23590 Fragaria vesca HOM05D001463 ORTHO05D001282 4.6e-07 58.5 140 32.1
Lalb_Chr18g0052921 Lupinus albus HOM05D001463 ORTHO05D001282 4.6e-07 58.5 158 31.0
Dinv37114 Davidia involucrata HOM05D001463 ORTHO05D001282 6.0e-07 58.2 161 34.8
Gorai.012G073500 Gossypium raimondii HOM05D001463 ORTHO05D001282 6.0e-07 58.2 170 43.5
LjContig00141g0025360 Lotus japonicus HOM05D001463 ORTHO05D001282 6.0e-07 58.2 158 38.6
MBI14_g02863_MAGBIO Magnolia biondii HOM05D001463 ORTHO05D001282 6.0e-07 58.2 165 33.9
Prupe.6G264600 Prunus persica HOM05D001463 ORTHO05D001282 6.0e-07 58.2 159 31.4
Rhsim03G0137600 Rhododendron simsii HOM05D001463 ORTHO05D001282 6.0e-07 58.2 150 34.0
Gohir.D05G092800 Gossypium hirsutum HOM05D001463 ORTHO05D001282 7.8e-07 57.8 151 35.1
Solyc05g052890.3 Solanum lycopersicum HOM05D001463 ORTHO05D001282 7.8e-07 57.8 153 34.0
arahy.Tifrunner.gnm1.ann1.9SAY5Z Arachis hypogaea HOM05D001463 ORTHO05D001282 1.0e-06 57.4 155 29.7
CARHR211340 Cardamine hirsuta HOM05D001463 ORTHO05D001282 1.0e-06 57.4 150 34.0
CsaV3_5G008550 Cucumis sativus L. HOM05D001463 ORTHO05D001282 1.0e-06 57.4 152 34.2
Dinv34453 Davidia involucrata HOM05D001463 ORTHO05D001282 1.0e-06 57.4 163 34.4
Gohir.D07G105300 Gossypium hirsutum HOM05D001463 ORTHO05D001282 1.0e-06 57.4 156 31.4
Sopen05g031400 Solanum pennellii HOM05D001463 ORTHO05D001282 1.0e-06 57.4 150 34.0
THA.LOC104823267 Tarenaya hassleriana HOM05D001463 ORTHO05D001282 1.0e-06 57.4 161 32.3
Aa31LG1G22680 Aethionema arabicum HOM05D001463 ORTHO05D001282 1.3e-06 57.0 139 38.8
AL6G11220 Arabidopsis lyrata HOM05D001463 ORTHO05D001282 1.3e-06 57.0 116 35.3
LjContig00141g0012501 Lotus japonicus HOM05D001463 ORTHO05D001282 1.3e-06 57.0 156 37.8
MD07G1207300 Malus domestica HOM05D001463 ORTHO05D001282 1.3e-06 57.0 160 36.9
MD12G1154800 Malus domestica HOM05D001463 ORTHO05D001282 1.3e-06 57.0 165 32.1
Potri.009G038300 Populus trichocarpa HOM05D001463 ORTHO05D001282 1.3e-06 57.0 168 33.3
Eucgr.B02296 Eucalyptus grandis HOM05D001463 ORTHO05D001282 1.7e-06 56.6 160 33.8
Thhalv10014930m.g Eutrema salsugineum HOM05D001463 ORTHO05D001282 2.3e-06 56.2 111 36.9
Gohir.D04G065300 Gossypium hirsutum HOM05D001463 ORTHO05D001282 2.3e-06 56.2 170 43.5
Medtr7g065150 Medicago truncatula HOM05D001463 ORTHO05D001282 2.3e-06 56.2 161 33.5
TAR369G0036 Trochodendron aralioides HOM05D001463 ORTHO05D001282 2.3e-06 56.2 168 35.1
Gohir.A05G346900 Gossypium hirsutum HOM05D001463 ORTHO05D001282 3.0e-06 55.8 170 41.8
Solyc09g011470.3 Solanum lycopersicum HOM05D001463 ORTHO05D001282 3.0e-06 55.8 156 32.7
Ciclev10013013m.g Citrus clementina HOM05D001463 ORTHO05D001282 3.9e-06 55.5 168 31.5
ECA236G4479 Erigeron canadensis HOM05D001463 ORTHO05D001282 3.9e-06 55.5 125 35.2
CSS0026922 Camellia sinensis var. sinensis HOM05D001463 ORTHO05D001282 5.1e-06 55.1 158 31.0
SalBow4G3124 Salvia bowleyana HOM05D001463 ORTHO05D001282 5.1e-06 55.1 130 36.2
Gohir.A09G160900 Gossypium hirsutum HOM05D001463 ORTHO05D001282 6.6e-06 54.7 161 33.5
Lsat_1_v5_gn_2_117121 Lactuca sativa HOM05D001463 ORTHO05D001282 6.6e-06 54.7 159 31.4
Lj1g0006352 Lotus japonicus HOM05D001463 ORTHO05D001282 6.6e-06 54.7 164 31.7
Lalb_Chr10g0104861 Lupinus albus HOM05D001463 ORTHO05D001282 6.6e-06 54.7 149 30.9
Potri.006G092400 Populus trichocarpa HOM05D001463 ORTHO05D001282 6.6e-06 54.7 162 32.1
MD03G1083100 Malus domestica HOM05D001463 ORTHO05D001282 8.6e-06 54.3 152 32.2
Nitab4.5_0006055g0060 Nicotiana tabacum HOM05D001463 ORTHO05D001282 8.6e-06 54.3 116 34.5
VMungo1383G3326 Vigna mungo HOM05D001463 ORTHO05D001282 8.6e-06 54.3 140 31.4
GSVIVG01024854001 Vitis vinifera HOM05D001463 ORTHO05D001282 8.6e-06 54.3 158 29.7


User provided reference genes

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