Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 1.1e-108 396.7 205 100.0
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 1.7e-82 309.7 206 79.6
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 7.9e-80 300.8 206 77.7
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 7.9e-80 300.8 208 78.8
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 3.0e-79 298.9 206 78.6
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 3.0e-79 298.9 208 78.4
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 3.0e-79 298.9 206 78.6
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 6.7e-79 297.7 205 76.1
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 1.3e-77 293.5 207 74.9
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 4.9e-74 281.6 205 74.1
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 5.6e-70 268.1 207 69.6
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 9.0e-60 234.2 205 67.8
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 5.9e-59 231.5 206 58.3
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 1.5e-38 163.7 200 43.5
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 2.0e-38 163.3 203 44.3
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 1.1e-36 157.5 203 44.3
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 1.8e-36 156.8 201 48.8
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 1.6e-35 153.7 195 46.7
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 2.6e-35 152.9 205 43.4
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 2.6e-35 152.9 204 41.7
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 7.7e-35 151.4 204 40.7
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 7.7e-35 151.4 204 41.7
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 1.7e-34 150.2 205 41.5
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 6.5e-34 148.3 151 48.3
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 8.5e-34 147.9 194 43.8
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 8.5e-34 147.9 202 43.1
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 8.5e-34 147.9 195 42.6
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 1.1e-33 147.5 195 42.1
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 1.5e-33 147.1 193 43.5
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 1.9e-33 146.7 195 42.1
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 1.9e-33 146.7 205 41.5
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 9.4e-33 144.4 195 42.6
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 1.2e-32 144.1 200 41.0
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 1.6e-32 143.7 198 39.9
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 1.6e-32 143.7 191 40.3
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 2.1e-32 143.3 198 39.4
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 2.7e-32 142.9 199 39.7
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 1.4e-31 140.6 203 36.5
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 1.4e-31 140.6 206 38.8
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 2.3e-31 139.8 199 39.7
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 2.3e-31 139.8 195 38.5
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 3.0e-31 139.4 143 46.9
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 3.0e-31 139.4 190 38.9
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 4.0e-31 139.0 145 46.9
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 5.2e-31 138.7 197 38.6
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 5.2e-31 138.7 204 38.2
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 6.7e-31 138.3 207 39.1
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 6.7e-31 138.3 195 39.5
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 6.7e-31 138.3 185 41.6
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 1.2e-30 137.5 190 40.0
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 1.5e-30 137.1 195 41.5
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 2.6e-30 136.3 144 48.6
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 4.4e-30 135.6 198 37.9
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 4.4e-30 135.6 190 37.9
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 2.2e-29 133.3 198 37.9
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 2.8e-29 132.9 162 45.1
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 2.8e-29 132.9 205 37.6
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 2.8e-29 132.9 197 36.0
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 6.3e-29 131.7 212 36.3
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 1.1e-28 131.0 155 43.9
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 1.1e-28 131.0 151 45.0
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 1.1e-28 131.0 151 45.0
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 1.1e-28 131.0 138 48.6
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 1.4e-28 130.6 152 43.4
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 1.8e-28 130.2 204 36.8
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 1.8e-28 130.2 195 37.4
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 2.4e-28 129.8 207 38.6
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 4.1e-28 129.0 185 39.5
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 9.1e-28 127.9 191 40.3
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 9.1e-28 127.9 185 38.9
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.2e-27 127.5 144 42.4
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 2.7e-27 126.3 195 35.4
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 7.7e-27 124.8 172 38.4
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 1.3e-26 124.0 209 35.4
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 1.7e-26 123.6 204 36.3
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 1.7e-26 123.6 204 35.3
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 2.2e-26 123.2 187 40.1
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 5.0e-26 122.1 183 37.2
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 6.5e-26 121.7 185 38.4
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 1.2e-24 117.5 193 34.7
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 2.1e-24 116.7 191 36.1
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 2.7e-24 116.3 149 41.6
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 3.6e-24 115.9 201 35.3
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 4.0e-23 112.5 203 36.9
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 8.8e-23 111.3 149 42.3
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 1.2e-22 110.9 123 44.7
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 1.5e-22 110.5 167 37.7
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 4.4e-22 109.0 192 36.5
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 2.8e-21 106.3 182 35.7
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 4.8e-21 105.5 135 40.0
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 1.6e-19 100.5 204 34.8
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 2.7e-19 99.8 163 33.7
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 3.8e-18 95.9 146 39.0
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 1.1e-17 94.4 162 35.8
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 6.1e-16 88.6 213 33.3
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 2.8e-13 79.7 149 34.2
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 9.2e-12 74.7 76 43.4
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 8.6e-10 68.2 126 34.1
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 1.5e-09 67.4 209 27.3
Manes.10G016915 Manihot esculenta HOM05D007615 ORTHO05D009643 1.8e-07 60.5 125 30.4


User provided reference genes

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