Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g06290 Schrenkiella parvula HOM05D002744 ORTHO05D008989 4.9e-100 367.9 192 100.0
BcaB08g34630 Brassica carinata HOM05D002744 ORTHO05D008989 1.4e-91 339.7 192 92.2
Thhalv10006252m.g Eutrema salsugineum HOM05D002744 ORTHO05D008989 1.9e-91 339.3 192 91.1
A09p49190 Brassica napus HOM05D002744 ORTHO05D008989 1.5e-88 329.7 193 90.2
BraA09t40372Z Brassica rapa HOM05D002744 ORTHO05D008989 1.9e-88 329.3 201 87.6
AL5G37530 Arabidopsis lyrata HOM05D002744 ORTHO05D008989 4.8e-87 324.7 193 87.6
Carub.0005s2299 Capsella rubella HOM05D002744 ORTHO05D008989 4.8e-87 324.7 190 86.8
AT3G56210 Arabidopsis thaliana HOM05D002744 ORTHO05D008989 4.9e-84 314.7 194 85.1
CARHR166360 Cardamine hirsuta HOM05D002744 ORTHO05D008989 8.1e-79 297.4 178 84.8
THA.LOC104824346 Tarenaya hassleriana HOM05D002744 ORTHO05D008989 1.0e-73 280.4 183 77.0
BolC8t50775H Brassica oleracea HOM05D002744 ORTHO05D008989 1.0e-68 263.8 188 75.5
BcaC07g39936 Brassica carinata HOM05D002744 ORTHO05D008989 2.2e-68 262.7 145 91.7
C08p31530 Brassica napus HOM05D002744 ORTHO05D008989 2.2e-68 262.7 142 93.7
Ciclev10032836m.g Citrus clementina HOM05D002744 ORTHO05D008989 3.0e-65 252.3 183 69.9
BcaB01g00016 Brassica carinata HOM05D002744 ORTHO05D008989 3.9e-65 251.9 161 85.7
Gohir.D04G071200 Gossypium hirsutum HOM05D002744 ORTHO05D008989 3.7e-63 245.4 190 66.3
Duzib114G0765 Durio zibethinus HOM05D002744 ORTHO05D008989 6.3e-63 244.6 192 66.7
Eucgr.G03110 Eucalyptus grandis HOM05D002744 ORTHO05D008989 6.3e-63 244.6 183 68.9
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 2.4e-62 242.7 163 76.1
CiPaw.02G197300 Carya illinoinensis HOM05D002744 ORTHO05D008989 3.1e-62 242.3 191 66.5
PGR142G3983 Punica granatum HOM05D002744 ORTHO05D008989 5.3e-62 241.5 180 68.9
Thecc.10G007100 Theobroma cacao HOM05D002744 ORTHO05D008989 9.0e-62 240.7 190 65.8
Gohir.A05G332500 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.5e-61 240.0 192 65.6
Rhsim09G0182800 Rhododendron simsii HOM05D002744 ORTHO05D008989 1.5e-61 240.0 184 68.5
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 5.9e-61 238.0 173 69.4
Nn2g11068 Nelumbo nucifera HOM05D002744 ORTHO05D008989 5.9e-61 238.0 189 64.0
Haze_17321 Corylus avellana HOM05D002744 ORTHO05D008989 1.3e-60 236.9 191 63.9
GSVIVG01032723001 Vitis vinifera HOM05D002744 ORTHO05D008989 2.2e-60 236.1 183 66.1
BcaB01g00017 Brassica carinata HOM05D002744 ORTHO05D008989 2.9e-60 235.7 176 77.3
Peaxi162Scf00284g00123 Petunia axillaris HOM05D002744 ORTHO05D008989 6.5e-60 234.6 191 64.4
QL08p064284 Quercus lobata HOM05D002744 ORTHO05D008989 6.5e-60 234.6 191 63.9
CANSAT56G2966 Cannabis sativa HOM05D002744 ORTHO05D008989 1.9e-59 233.0 193 63.2
Dinv21809 Davidia involucrata HOM05D002744 ORTHO05D008989 4.2e-59 231.9 184 65.2
AUR62022976 Chenopodium quinoa HOM05D002744 ORTHO05D008989 2.1e-58 229.6 184 65.8
Cc02_g05720 Coffea canephora HOM05D002744 ORTHO05D008989 2.1e-58 229.6 183 63.9
Gorai.012G080100 Gossypium raimondii HOM05D002744 ORTHO05D008989 2.1e-58 229.6 202 61.9
Actinidia00986 Actinidia chinensis HOM05D002744 ORTHO05D008989 4.6e-58 228.4 191 62.8
EL10Ac2g04293 Beta vulgaris HOM05D002744 ORTHO05D008989 7.9e-58 227.6 185 65.4
Sed0024728 Sechium edule HOM05D002744 ORTHO05D008989 7.9e-58 227.6 190 60.5
TWI38G2197 Tripterygium wilfordii HOM05D002744 ORTHO05D008989 1.0e-57 227.3 186 63.4
RcHm_v2.0_Chr1g0371481 Rosa chinensis HOM05D002744 ORTHO05D008989 1.4e-57 226.9 189 63.5
Manes.10G008400 Manihot esculenta HOM05D002744 ORTHO05D008989 1.8e-57 226.5 184 63.6
CsaV3_5G010720 Cucumis sativus L. HOM05D002744 ORTHO05D008989 2.3e-57 226.1 192 60.9
PSO017G6389 Papaver somniferum HOM05D002744 ORTHO05D008989 2.3e-57 226.1 188 60.6
Glyma.11G234700 Glycine max HOM05D002744 ORTHO05D008989 5.1e-57 224.9 184 62.0
MD07G1229300 Malus domestica HOM05D002744 ORTHO05D008989 6.7e-57 224.6 187 62.6
PSO170G0776 Papaver somniferum HOM05D002744 ORTHO05D008989 8.8e-57 224.2 188 60.1
Nitab4.5_0000928g0050 Nicotiana tabacum HOM05D002744 ORTHO05D008989 1.5e-56 223.4 183 62.8
vmacro09984 Vaccinium macrocarpon HOM05D002744 ORTHO05D008989 1.9e-56 223.0 219 57.1
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 3.3e-56 222.2 187 61.0
arahy.Tifrunner.gnm1.ann1.HIE7A8 Arachis hypogaea HOM05D002744 ORTHO05D008989 4.3e-56 221.9 191 59.2
Sopen02g021690 Solanum pennellii HOM05D002744 ORTHO05D008989 5.7e-56 221.5 191 61.3
FvH4_7g25501 Fragaria vesca HOM05D002744 ORTHO05D008989 7.4e-56 221.1 187 60.4
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 9.7e-56 220.7 187 59.4
MD01G1161400 Malus domestica HOM05D002744 ORTHO05D008989 9.7e-56 220.7 190 61.6
Hund13513 Selenicereus undatus HOM05D002744 ORTHO05D008989 9.7e-56 220.7 184 62.0
Glyma.18G022300 Glycine max HOM05D002744 ORTHO05D008989 1.3e-55 220.3 184 61.4
arahy.Tifrunner.gnm1.ann1.N80L0Z Arachis hypogaea HOM05D002744 ORTHO05D008989 1.7e-55 219.9 184 59.8
Hma1.2p1_1240F.1_g269640 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 1.7e-55 219.9 159 70.4
arahy.Tifrunner.gnm1.ann1.B5C26Y Arachis hypogaea HOM05D002744 ORTHO05D008989 2.2e-55 219.5 184 59.8
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.4e-54 216.9 187 59.9
HanXRQChr17g0560791 Helianthus annuus HOM05D002744 ORTHO05D008989 1.4e-54 216.9 187 59.4
AUR62012334 Chenopodium quinoa HOM05D002744 ORTHO05D008989 1.8e-54 216.5 152 70.4
Potri.008G075600 Populus trichocarpa HOM05D002744 ORTHO05D008989 2.4e-54 216.1 180 62.2
Lj6g0011522 Lotus japonicus HOM05D002744 ORTHO05D008989 3.1e-54 215.7 193 61.7
Aa31LG10G11120 Aethionema arabicum HOM05D002744 ORTHO05D008989 4.1e-54 215.3 126 89.7
Nitab4.5_0000263g0100 Nicotiana tabacum HOM05D002744 ORTHO05D008989 4.1e-54 215.3 154 68.8
Os03g0665800 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D008989 4.1e-54 215.3 162 66.7
Atru.BG.256.p Acer truncatum HOM05D002744 ORTHO05D008989 6.9e-54 214.5 152 71.7
Ca_15179_v3 Cicer arietinum L. HOM05D002744 ORTHO05D008989 7.7e-53 211.1 191 57.6
Medtr3g072120 Medicago truncatula HOM05D002744 ORTHO05D008989 7.7e-53 211.1 192 59.4
Sabra08G0056200 Salix brachista HOM05D002744 ORTHO05D008989 1.0e-52 210.7 187 58.3
TPR.G28641 Trifolium pratense HOM05D002744 ORTHO05D008989 1.0e-52 210.7 191 59.2
Migut.A01076 Erythranthe guttata HOM05D002744 ORTHO05D008989 1.3e-52 210.3 189 59.8
Phvul.001G248100 Phaseolus vulgaris HOM05D002744 ORTHO05D008989 1.7e-52 209.9 186 59.1
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 6.5e-52 208.0 159 66.0
TAR369G0133 Trochodendron aralioides HOM05D000826 ORTHO05D001831 1.1e-51 207.2 152 67.1
SalBow3G4547 Salvia bowleyana HOM05D002744 ORTHO05D008989 2.5e-51 206.1 182 58.8
MSTRG.12212 Avicennia marina HOM05D002744 ORTHO05D008989 5.5e-51 204.9 181 58.6
DCAR_011891 Daucus carota HOM05D002744 ORTHO05D008989 5.5e-51 204.9 148 68.9
Lju41C22T0 Lonicera japonica HOM05D002744 ORTHO05D008989 3.6e-50 202.2 152 67.8
Lalb_Chr08g0231351 Lupinus albus HOM05D002744 ORTHO05D008989 6.1e-50 201.4 184 57.6
ECA233G4001 Erigeron canadensis HOM05D002744 ORTHO05D008989 1.0e-49 200.7 188 57.4
Lj8C58T1 Lonicera japonica HOM05D002744 ORTHO05D008989 1.0e-49 200.7 152 67.1
Oeu026180.1 Olea europaea HOM05D002744 ORTHO05D008989 1.4e-49 200.3 140 70.7
ATR0681G046 Amborella trichopoda HOM05D000826 ORTHO05D008989 1.8e-49 199.9 163 63.2
SGA_v2.0_scaffold36G14267 Striga asiatica HOM05D002744 ORTHO05D008989 1.7e-47 193.4 179 59.2
HPP92_013966 Vanilla planifolia HOM05D002744 ORTHO05D008989 2.2e-47 193.0 168 58.9
EL10Ac2g04295 Beta vulgaris HOM05D002744 ORTHO05D008989 8.2e-47 191.0 144 69.4
Lsat_1_v5_gn_8_13401 Lactuca sativa HOM05D002744 ORTHO05D008989 1.4e-46 190.3 148 64.9
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 2.4e-46 189.5 209 49.3
Hma1.2p1_1240F.1_g269630 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 2.4e-46 189.5 135 71.9
SEGI_09795 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 7.0e-46 188.0 184 54.9
VMungo1383G3724 Vigna mungo HOM05D002744 ORTHO05D008989 3.4e-45 185.7 152 60.5
Lj1A963T49 Lonicera japonica HOM05D002744 ORTHO05D008989 4.5e-45 185.3 111 81.1
CDE02G4284 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 1.4e-43 180.3 132 68.2
unitig_32.g11706 Utricularia gibba HOM05D002744 ORTHO05D008989 1.4e-43 180.3 173 55.5
unitig_33.g30211 Utricularia gibba HOM05D002744 ORTHO05D008989 1.4e-43 180.3 173 55.5
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 1.4e-43 180.3 128 68.8
Prupe.2G259500 Prunus persica HOM05D002744 ORTHO05D008989 2.4e-38 162.9 119 69.7
ClCG07G004800 Citrullus lanatus HOM05D002744 ORTHO05D008989 3.1e-38 162.5 193 50.3
Solyc02g076790.4 Solanum lycopersicum HOM05D002744 ORTHO05D008989 5.0e-36 155.2 124 65.3
PGSC0003DMG400010239 Solanum tuberosum HOM05D002744 ORTHO05D008989 5.0e-36 155.2 124 66.1
TAR623G0678 Trochodendron aralioides HOM05D002744 ORTHO05D008989 2.3e-33 146.4 110 70.0
SEGI_38813 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 3.0e-33 146.0 114 64.9
MELO3C020107.2 Cucumis melo HOM05D002744 ORTHO05D008989 4.4e-32 142.1 192 42.7
Gohir.A10G240750 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.7e-31 140.2 123 60.2
Psat5g130160 Pisum sativum HOM05D002744 ORTHO05D008989 5.3e-30 135.2 102 66.7
Mapoly0001s0439 Marchantia polymorpha HOM05D002744 ORTHO05D008989 1.5e-27 127.1 163 44.2
Sc10g0002800 Simmondsia chinensis HOM05D002744 ORTHO05D008989 2.1e-26 123.2 131 55.0
Hma1.2p1_0322F.1_g124790 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 5.4e-22 108.6 148 43.9
C06p23580 Brassica napus HOM05D002744 ORTHO05D008989 1.3e-20 104.0 62 79.0
CDE01G0559 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 2.3e-20 103.2 137 45.3
Pp3c8_1670 Physcomitrium patens HOM05D002744 ORTHO05D008989 1.5e-16 90.5 98 45.9
Psat5g125520 Pisum sativum HOM05D002744 ORTHO05D008989 1.7e-12 77.0 59 64.4
SMO147G0318 Selaginella moellendorffii HOM05D002744 ORTHO05D008989 1.1e-11 74.3 158 33.5


User provided reference genes

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