Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 1.1e-95 353.2 176 100.0
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 6.1e-89 330.9 176 93.8
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 6.1e-89 330.9 176 93.8
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 6.1e-89 330.9 176 93.8
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 7.9e-89 330.5 176 94.3
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 7.9e-89 330.5 176 94.3
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 7.9e-89 330.5 176 94.3
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 1.0e-88 330.1 176 92.6
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 1.8e-88 329.3 175 93.1
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 1.8e-88 329.3 175 93.1
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 2.3e-88 328.9 176 93.8
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 6.7e-88 327.4 176 93.8
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 2.0e-87 325.9 176 93.8
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 2.0e-87 325.9 176 93.8
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 2.9e-83 312.0 178 88.2
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 4.2e-82 308.1 178 88.8
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 1.6e-81 306.2 177 89.8
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 5.7e-79 297.7 182 85.7
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 1.7e-78 296.2 176 86.9
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 4.8e-70 268.1 184 76.6
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 5.7e-63 244.6 179 71.5
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 2.3e-59 232.6 177 68.4
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 3.3e-58 228.8 176 67.0
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 9.5e-58 227.3 182 68.7
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 1.8e-56 223.0 177 66.7
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 3.0e-56 222.2 176 65.9
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 8.9e-56 220.7 176 65.9
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 1.5e-55 219.9 176 67.6
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 2.0e-55 219.5 180 66.1
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 3.4e-55 218.8 180 66.7
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 3.4e-55 218.8 180 66.1
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 4.4e-55 218.4 180 66.1
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 7.5e-55 217.6 177 67.2
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 1.7e-54 216.5 178 66.3
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 2.2e-54 216.1 176 68.8
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 2.9e-54 215.7 176 65.9
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 2.9e-54 215.7 179 64.8
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 2.9e-54 215.7 180 62.8
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 3.7e-54 215.3 183 64.5
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 4.9e-54 214.9 139 76.3
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 6.4e-54 214.5 183 66.7
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 8.3e-54 214.2 139 77.7
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 1.4e-53 213.4 183 62.3
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 1.4e-53 213.4 174 66.1
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 2.4e-53 212.6 180 63.3
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 4.1e-53 211.8 176 65.3
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 5.4e-53 211.5 174 63.8
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 7.0e-53 211.1 185 62.7
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 9.2e-53 210.7 175 65.7
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 1.6e-52 209.9 166 63.3
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 1.6e-52 209.9 180 63.9
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 1.6e-52 209.9 181 60.8
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 2.0e-52 209.5 177 63.8
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 3.5e-52 208.8 178 62.4
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 4.6e-52 208.4 177 63.3
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 4.6e-52 208.4 184 62.5
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 1.0e-51 207.2 177 63.8
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 1.0e-51 207.2 177 61.6
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 1.0e-51 207.2 121 79.3
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 1.0e-51 207.2 179 63.1
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 1.3e-51 206.8 177 61.0
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 1.7e-51 206.5 136 75.7
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 1.7e-51 206.5 176 64.8
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 3.9e-51 205.3 179 62.6
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 3.9e-51 205.3 179 65.4
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 5.0e-51 204.9 166 62.0
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 5.0e-51 204.9 175 62.9
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 6.6e-51 204.5 180 58.9
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 6.6e-51 204.5 131 75.6
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 6.6e-51 204.5 179 59.8
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 6.6e-51 204.5 177 62.7
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 6.6e-51 204.5 177 62.7
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 6.6e-51 204.5 176 61.9
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 6.6e-51 204.5 181 63.0
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 8.6e-51 204.1 181 60.8
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 1.9e-50 203.0 177 60.5
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 1.9e-50 203.0 190 60.5
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 1.9e-50 203.0 185 60.0
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 2.5e-50 202.6 119 81.5
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 3.3e-50 202.2 170 61.8
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 5.6e-50 201.4 139 71.2
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 5.6e-50 201.4 177 61.6
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 9.5e-50 200.7 162 66.0
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 2.1e-49 199.5 121 79.3
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 2.1e-49 199.5 140 72.9
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 2.8e-49 199.1 201 57.2
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 6.2e-49 198.0 181 64.6
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 6.2e-49 198.0 178 59.0
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 3.1e-48 195.7 140 71.4
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 1.5e-47 193.4 139 71.2
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 4.4e-47 191.8 177 59.9
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 4.4e-47 191.8 183 56.8
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 3.2e-45 185.7 115 76.5
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 2.0e-44 183.0 149 65.1
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 2.7e-44 182.6 121 74.4
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 5.0e-43 178.3 131 65.6
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 8.6e-43 177.6 122 68.9
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 5.6e-42 174.9 184 56.0
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.4e-40 170.2 127 65.4
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 1.4e-40 170.2 185 54.1
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 7.1e-37 157.9 188 50.0
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 9.2e-37 157.5 161 54.0
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 2.8e-33 146.0 117 63.2
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 2.8e-33 146.0 103 68.0
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 4.6e-28 128.6 123 55.3
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 2.8e-25 119.4 177 43.5
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 9.9e-23 110.9 117 56.4
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 1.3e-22 110.5 68 76.5
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 1.7e-22 110.2 58 84.5
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 8.4e-22 107.8 121 56.2
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 1.0e-19 100.9 106 53.8
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 2.4e-16 89.7 111 50.5
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 4.0e-08 62.4 110 44.5
Cre03.g144184 Chlamydomonas reinhardtii HOM05D007229 ORTHO05D009131 3.4e-07 59.3 65 49.2
unitig_90.g27575 Utricularia gibba HOM05D007229 ORTHO05D009131 4.5e-07 58.9 76 47.4


User provided reference genes

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