Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g05780 Schrenkiella parvula HOM05D009749 ORTHO05D008033 2.6e-189 665.2 335 100.0
A09p49630 Brassica napus HOM05D009749 ORTHO05D008033 2.5e-147 525.8 335 80.6
BraA09t40416Z Brassica rapa HOM05D009749 ORTHO05D008033 2.5e-147 525.8 335 80.6
C08p32040 Brassica napus HOM05D009749 ORTHO05D008033 3.2e-147 525.4 335 80.9
BcaC07g39991 Brassica carinata HOM05D009749 ORTHO05D008033 5.5e-147 524.6 335 80.9
BolC8t50822H Brassica oleracea HOM05D009749 ORTHO05D008033 5.5e-147 524.6 335 80.9
A04p03560 Brassica napus HOM05D009749 ORTHO05D008033 1.8e-145 519.6 336 81.2
BolC4t25234H Brassica oleracea HOM05D009749 ORTHO05D008033 4.1e-142 508.4 343 78.4
C04p35700 Brassica napus HOM05D009749 ORTHO05D008033 5.3e-142 508.1 336 79.5
AL5G38190 Arabidopsis lyrata HOM05D009749 ORTHO05D008033 4.2e-139 498.4 340 80.9
BolC6t37547H Brassica oleracea HOM05D009749 ORTHO05D008033 3.9e-137 491.9 335 79.1
AT3G56810 Arabidopsis thaliana HOM05D009749 ORTHO05D008033 1.9e-136 489.6 342 78.9
BcaC08g44807 Brassica carinata HOM05D009749 ORTHO05D008033 8.2e-135 484.2 335 78.2
BraA04t16080Z Brassica rapa HOM05D009749 ORTHO05D008033 1.8e-134 483.0 338 76.6
C06p23780 Brassica napus HOM05D009749 ORTHO05D008033 2.4e-134 482.6 335 78.2
BcaB02g08346 Brassica carinata HOM05D009749 ORTHO05D008033 1.9e-131 473.0 336 76.5
A07p23080 Brassica napus HOM05D009749 ORTHO05D008033 5.5e-131 471.5 340 77.1
BraA07t29970Z Brassica rapa HOM05D009749 ORTHO05D008033 5.5e-131 471.5 340 77.1
CARHR166960 Cardamine hirsuta HOM05D009749 ORTHO05D008033 7.2e-131 471.1 343 77.0
BcaB02g07636 Brassica carinata HOM05D009749 ORTHO05D008033 1.0e-129 467.2 335 76.4
BcaC07g40118 Brassica carinata HOM05D009749 ORTHO05D008033 1.9e-123 446.4 344 73.5
Carub.0005s2354 Capsella rubella HOM05D009749 ORTHO05D008033 1.7e-116 423.3 343 72.0
BcaC02g09872 Brassica carinata HOM05D009749 ORTHO05D008033 1.1e-99 367.5 262 75.2
Thhalv10006250m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 1.9e-67 260.4 184 76.1
Thhalv10006450m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 5.2e-57 225.7 157 80.9
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 2.4e-54 216.9 331 50.2
Aa31LG10G11650 Aethionema arabicum HOM05D009749 ORTHO05D008033 1.3e-39 167.9 144 66.7
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 1.0e-15 88.6 350 28.0
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 9.4e-14 82.0 391 27.6
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 3.6e-13 80.1 256 28.5
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 1.4e-12 78.2 338 26.6
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 3.0e-12 77.0 335 29.0
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 1.5e-11 74.7 403 26.3
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 2.0e-11 74.3 331 27.5
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 2.6e-11 73.9 429 25.2
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 5.7e-11 72.8 272 26.8
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 5.7e-11 72.8 390 25.9
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 5.7e-11 72.8 291 27.1
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 7.4e-11 72.4 321 29.3
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 7.4e-11 72.4 203 29.6
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 2.2e-10 70.9 339 27.4
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 2.8e-10 70.5 246 29.3
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 3.7e-10 70.1 193 32.1
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 4.8e-10 69.7 324 24.1
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 6.3e-10 69.3 187 31.0
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 8.2e-10 68.9 221 25.3
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 8.2e-10 68.9 233 27.9
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 8.2e-10 68.9 192 31.2
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 1.8e-09 67.8 316 28.2
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 1.2e-08 65.1 197 25.4
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 1.5e-08 64.7 396 24.5
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 2.0e-08 64.3 49 55.1
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 2.0e-08 64.3 49 55.1
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 3.4e-08 63.5 213 26.3
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 3.4e-08 63.5 199 29.1
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 5.9e-08 62.8 190 26.8
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 1.0e-07 62.0 205 27.3
MELO3C030720.2 Cucumis melo HOM05D007667 ORTHO05D008033 1.3e-07 61.6 271 24.0
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 1.3e-07 61.6 301 24.6
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 2.2e-07 60.8 48 52.1
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 2.2e-07 60.8 193 24.9
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 2.2e-07 60.8 248 26.6
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 5.0e-07 59.7 263 25.1
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 6.5e-07 59.3 260 25.8
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 8.5e-07 58.9 378 26.7
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 8.5e-07 58.9 109 33.0
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 8.5e-07 58.9 339 24.2
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 1.1e-06 58.5 202 25.2
Lalb_Chr22g0358161 Lupinus albus HOM05D007667 ORTHO05D008033 1.4e-06 58.2 45 51.1
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 1.4e-06 58.2 254 26.4
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 1.9e-06 57.8 97 38.1
CsaV3_3G039420 Cucumis sativus L. HOM05D007667 ORTHO05D008033 2.5e-06 57.4 278 23.0
Sc13g0000730 Simmondsia chinensis HOM05D007667 ORTHO05D008033 5.5e-06 56.2 60 46.7
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 7.2e-06 55.8 219 27.4
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 7.2e-06 55.8 264 25.0


User provided reference genes

Program Settings