Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g05750 Schrenkiella parvula HOM05D005510 ORTHO05D006750 1.9e-253 878.6 438 100.0
Thhalv10005964m.g Eutrema salsugineum HOM05D005510 ORTHO05D006750 5.3e-227 790.8 455 87.3
AT3G56840 Arabidopsis thaliana HOM05D005510 ORTHO05D006750 6.3e-220 767.3 437 87.2
BcaC07g40115 Brassica carinata HOM05D005510 ORTHO05D006750 1.8e-219 765.8 436 88.8
A09p49660 Brassica napus HOM05D005510 ORTHO05D006750 7.0e-219 763.8 436 88.3
BraA09t40419Z Brassica rapa HOM05D005510 ORTHO05D006750 7.0e-219 763.8 436 88.3
AL5G38220 Arabidopsis lyrata HOM05D005510 ORTHO05D006750 9.1e-219 763.5 438 86.8
BolC8t50825H Brassica oleracea HOM05D005510 ORTHO05D006750 5.0e-217 757.7 436 87.4
Carub.0005s2357 Capsella rubella HOM05D005510 ORTHO05D006750 1.4e-211 739.6 437 85.8
BcaC07g39994 Brassica carinata HOM05D005510 ORTHO05D006750 3.4e-205 718.4 436 84.4
Aa31LG10G11690 Aethionema arabicum HOM05D005510 ORTHO05D006750 1.4e-198 696.4 436 79.8
THA.LOC104803249 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 1.3e-185 653.3 443 77.0
C08p32070 Brassica napus HOM05D005510 ORTHO05D006750 1.9e-168 596.3 348 86.8
Cpa.g.sc33.180 Carica papaya HOM05D005510 ORTHO05D006750 7.4e-160 567.8 399 69.2
Dinv14542 Davidia involucrata HOM05D005510 ORTHO05D006750 4.8e-159 565.1 408 68.4
Ciclev10011846m.g Citrus clementina HOM05D005510 ORTHO05D006750 3.4e-157 558.9 401 68.8
Atru.chr8.924 Acer truncatum HOM05D005510 ORTHO05D006750 4.5e-157 558.5 404 67.6
Potri.006G026100 Populus trichocarpa HOM05D005510 ORTHO05D006750 3.8e-156 555.4 426 64.3
QL07p015480 Quercus lobata HOM05D005510 ORTHO05D006750 5.5e-155 551.6 400 67.5
CSS0010239 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 9.3e-155 550.8 397 67.8
Rhsim13G0197800 Rhododendron simsii HOM05D005510 ORTHO05D006750 1.6e-154 550.1 416 65.4
Prupe.7G023400 Prunus persica HOM05D005510 ORTHO05D006750 4.6e-154 548.5 404 68.1
Actinidia38200 Actinidia chinensis HOM05D005510 ORTHO05D006750 1.0e-153 547.4 441 62.8
TWI74G1137 Tripterygium wilfordii HOM05D005510 ORTHO05D006750 2.3e-153 546.2 394 68.0
GSVIVG01025858001 Vitis vinifera HOM05D005510 ORTHO05D006750 2.5e-152 542.7 395 67.6
Nn7g37230 Nelumbo nucifera HOM05D005510 ORTHO05D006750 3.3e-152 542.3 405 64.7
Aqoxy3G03066 Aquilegia oxysepala HOM05D005510 ORTHO05D006750 5.6e-152 541.6 405 66.4
Eucgr.A02173 Eucalyptus grandis HOM05D005510 ORTHO05D006750 5.6e-152 541.6 425 65.2
MD14G1100100 Malus domestica HOM05D005510 ORTHO05D006750 9.6e-152 540.8 399 68.2
Cfa019896 Carpinus fangiana HOM05D005510 ORTHO05D006750 1.6e-151 540.0 419 65.4
MBI13_g44207_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 3.7e-151 538.9 406 65.0
Medtr6g026730 Medicago truncatula HOM05D005510 ORTHO05D006750 3.7e-151 538.9 390 67.7
CsaV3_4G029010 Cucumis sativus L. HOM05D005510 ORTHO05D006750 8.2e-151 537.7 400 67.0
PSO384G1661 Papaver somniferum HOM05D005510 ORTHO05D006750 1.1e-150 537.3 390 66.7
HPP92_018208 Vanilla planifolia HOM05D005510 ORTHO05D006750 1.1e-150 537.3 392 67.3
Cc06_g18550 Coffea canephora HOM05D005510 ORTHO05D006750 1.4e-150 537.0 396 66.4
FAN26G2114 Fragaria x ananassa HOM05D005510 ORTHO05D006750 6.9e-150 534.6 402 66.9
RcHm_v2.0_Chr3g0495031 Rosa chinensis HOM05D005510 ORTHO05D006750 1.2e-149 533.9 441 62.6
FvH4_1g29380 Fragaria vesca HOM05D005510 ORTHO05D006750 2.0e-149 533.1 390 68.2
MELO3C019166.2 Cucumis melo HOM05D005510 ORTHO05D006750 2.6e-149 532.7 400 66.2
PGR042G2248 Punica granatum HOM05D005510 ORTHO05D006750 3.4e-149 532.3 426 61.3
Sabra06G0019200 Salix brachista HOM05D005510 ORTHO05D006750 5.8e-149 531.6 454 59.5
Psat1g087480 Pisum sativum HOM05D005510 ORTHO05D006750 2.2e-148 529.6 425 62.4
PSO339G1815 Papaver somniferum HOM05D005510 ORTHO05D006750 2.9e-148 529.3 392 66.1
Hma1.2p1_1327F.1_g275890 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 4.9e-148 528.5 418 62.2
Ca_04447_v3 Cicer arietinum L. HOM05D002043 ORTHO05D002207 6.5e-148 528.1 394 64.7
Glyma.05G079900 Glycine max HOM05D005510 ORTHO05D006750 6.5e-148 528.1 395 64.8
CANSAT11G0391 Cannabis sativa HOM05D005510 ORTHO05D006750 3.2e-147 525.8 415 62.9
Phvul.004G053400 Phaseolus vulgaris HOM05D005510 ORTHO05D006750 3.2e-147 525.8 392 65.6
AUR62020963 Chenopodium quinoa HOM05D005510 ORTHO05D006750 1.2e-146 523.9 424 60.1
Oeu008195.1 Olea europaea HOM05D005510 ORTHO05D006750 1.2e-146 523.9 392 64.5
Hund24472 Selenicereus undatus HOM05D005510 ORTHO05D006750 1.2e-146 523.9 393 66.4
Sopen10g030080 Solanum pennellii HOM05D005510 ORTHO05D006750 1.2e-146 523.9 405 63.5
PGSC0003DMG400008133 Solanum tuberosum HOM05D005510 ORTHO05D006750 1.2e-146 523.9 402 64.7
Lj1C1070G2 Lonicera japonica HOM05D005510 ORTHO05D006750 1.3e-145 520.4 419 63.5
Peaxi162Scf00002g00419 Petunia axillaris HOM05D005510 ORTHO05D006750 2.3e-145 519.6 398 63.6
SGA_v2.0_scaffold69G23139 Striga asiatica HOM05D005510 ORTHO05D006750 5.1e-145 518.5 411 62.8
Lj5g0015267 Lotus japonicus HOM05D005510 ORTHO05D006750 8.7e-145 517.7 424 60.4
Manes.10G072300 Manihot esculenta HOM05D005510 ORTHO05D006750 1.1e-144 517.3 409 62.8
ATR1096G068 Amborella trichopoda HOM05D005510 ORTHO05D006750 1.9e-144 516.5 393 61.8
EL10Ac3g07380 Beta vulgaris HOM05D005510 ORTHO05D006750 5.7e-144 515.0 432 59.3
Lalb_Chr02g0157631 Lupinus albus HOM05D005510 ORTHO05D006750 5.7e-144 515.0 439 59.5
TAR623G1399 Trochodendron aralioides HOM05D005510 ORTHO05D006750 5.7e-144 515.0 392 64.5
A09p49680 Brassica napus HOM05D005510 ORTHO05D006750 7.4e-144 514.6 288 87.5
Solyc10g079440.2 Solanum lycopersicum HOM05D005510 ORTHO05D006750 7.4e-144 514.6 399 63.4
BraA09t40424Z Brassica rapa HOM05D005510 ORTHO05D006750 9.7e-144 514.2 286 88.1
DCAR_020612 Daucus carota HOM05D005510 ORTHO05D006750 1.6e-143 513.5 396 64.9
Duzib093G0795 Durio zibethinus HOM05D005510 ORTHO05D006750 2.2e-143 513.1 390 66.2
Gohir.A01G189700 Gossypium hirsutum HOM05D005510 ORTHO05D006750 3.7e-143 512.3 390 65.9
SalBow6G2337 Salvia bowleyana HOM05D005510 ORTHO05D006750 3.7e-143 512.3 396 64.1
Gorai.002G222700 Gossypium raimondii HOM05D005510 ORTHO05D006750 4.8e-143 511.9 390 65.6
Os01g0809900 Oryza sativa ssp. japonica HOM05D005510 ORTHO05D006750 4.8e-143 511.9 418 61.7
Gohir.D01G179900 Gossypium hirsutum HOM05D005510 ORTHO05D006750 1.1e-142 510.8 390 65.4
SalBow6G2820 Salvia bowleyana HOM05D005510 ORTHO05D006750 1.4e-142 510.4 396 63.9
EL10Ac3g07382 Beta vulgaris HOM05D005510 ORTHO05D006750 9.0e-142 507.7 471 55.4
arahy.Tifrunner.gnm1.ann1.RHHN50 Arachis hypogaea HOM05D005510 ORTHO05D006750 1.0e-140 504.2 461 56.4
Migut.J01685 Erythranthe guttata HOM05D005510 ORTHO05D006750 1.7e-140 503.4 421 60.3
COL.COLO4_37568 Corchorus olitorius HOM05D005510 ORTHO05D006750 5.0e-140 501.9 397 64.0
arahy.Tifrunner.gnm1.ann1.VC24PE Arachis hypogaea HOM05D005510 ORTHO05D006750 4.2e-139 498.8 486 54.5
Lsat_1_v5_gn_5_40140 Lactuca sativa HOM05D005510 ORTHO05D006750 2.7e-138 496.1 401 60.1
HanXRQChr02g0047171 Helianthus annuus HOM05D005510 ORTHO05D006750 6.1e-138 495.0 418 60.3
CDE08G0225 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 3.3e-136 489.2 405 60.7
Sc13g0000690 Simmondsia chinensis HOM05D005510 ORTHO05D006750 4.8e-135 485.3 367 65.1
unitig_749.g14152 Utricularia gibba HOM05D005510 ORTHO05D006750 7.7e-133 478.0 413 60.3
Nitab4.5_0000646g0280 Nicotiana tabacum HOM05D005510 ORTHO05D006750 1.4e-131 473.8 445 56.4
Haze_20353 Corylus avellana HOM05D005510 ORTHO05D006750 2.3e-129 466.5 372 63.2
CSS0036939 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 2.0e-125 453.4 331 66.2
Pp3c12_4730 Physcomitrium patens HOM05D005510 ORTHO05D006750 1.9e-123 446.8 417 54.2
arahy.Tifrunner.gnm1.ann1.T4STFC Arachis hypogaea HOM05D005510 ORTHO05D006750 1.6e-122 443.7 426 54.7
ClCG04G005050 Citrullus lanatus HOM05D005510 ORTHO05D006750 3.6e-122 442.6 368 60.9
VMungo0464G0325 Vigna mungo HOM05D005510 ORTHO05D006750 1.8e-121 440.3 474 50.8
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 1.3e-119 434.1 396 56.1
CAN.G641.38 Capsicum annuum HOM05D005510 ORTHO05D006750 1.7e-119 433.7 332 63.6
AUR62018456 Chenopodium quinoa HOM05D005510 ORTHO05D006750 3.5e-117 426.0 328 61.6
CARHR166990 Cardamine hirsuta HOM05D005510 ORTHO05D006750 8.5e-116 421.4 234 87.6
AagrBONN_evm.TU.Sc2ySwM_344.4799 Anthoceros agrestis HOM05D005510 ORTHO05D000746 2.1e-114 416.8 385 52.5
Thecc.05G124100 Theobroma cacao HOM05D005510 ORTHO05D006750 1.2e-109 401.0 327 62.4
Sed0017548 Sechium edule HOM05D005510 ORTHO05D006750 3.5e-109 399.4 318 62.3
Hma1.2p1_1327F.1_g275900 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 7.2e-107 391.7 333 58.3
Mapoly0011s0121 Marchantia polymorpha HOM05D005510 ORTHO05D006750 2.1e-106 390.2 361 53.2
Nitab4.5_0002805g0080 Nicotiana tabacum HOM05D005510 ORTHO05D006750 1.1e-102 377.9 353 57.2
SMO116G0325 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 1.6e-101 374.0 414 46.6
Zm00001eb150290 Zea mays HOM05D005510 ORTHO05D006750 1.9e-99 367.1 290 62.8
CiPaw.09G161300 Carya illinoinensis HOM05D005510 ORTHO05D006750 7.2e-99 365.2 282 63.5
MBI13_g43864_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 4.4e-96 355.9 325 55.7
THA.LOC104803303 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 1.6e-93 347.4 241 72.2
Cre13.g574150 Chlamydomonas reinhardtii HOM05D005510 ORTHO05D006750 1.4e-86 324.3 436 42.9
THA.LOC104803301 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 3.6e-82 309.7 190 78.4
arahy.Tifrunner.gnm1.ann1.MR8QPJ Arachis hypogaea HOM05D005510 ORTHO05D006750 8.9e-81 305.1 418 43.3
CSS0041188 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 6.4e-79 298.9 241 61.4
TPR.G23234 Trifolium pratense HOM05D005510 ORTHO05D006750 3.1e-73 280.0 213 62.9
CAN.G248.49 Capsicum annuum HOM05D005510 ORTHO05D006750 4.4e-64 249.6 349 42.7
MSTRG.19825 Avicennia marina HOM05D005510 ORTHO05D006750 2.0e-56 224.2 161 67.7
TPR.G942 Trifolium pratense HOM05D005510 ORTHO05D006750 1.9e-54 217.6 148 70.9
Manes.07G109500 Manihot esculenta HOM05D005510 ORTHO05D006750 6.0e-53 212.6 156 67.9
SEGI_04748 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 1.5e-51 208.0 163 62.0
Manes.05G099066 Manihot esculenta HOM05D005510 ORTHO05D006750 2.5e-51 207.2 164 64.0
Cfa027308 Carpinus fangiana HOM05D005510 ORTHO05D006750 2.1e-50 204.1 402 35.8
Zm00001eb093570 Zea mays HOM05D005510 ORTHO05D006750 2.3e-44 184.1 276 40.6
CBR_g4412 Chara braunii HOM05D005510 ORTHO05D006750 7.9e-37 159.1 450 29.3
PGSC0003DMG400012053 Solanum tuberosum HOM05D005510 ORTHO05D006750 6.7e-36 156.0 145 54.5
SalBow7G3561 Salvia bowleyana HOM05D005510 ORTHO05D006750 1.4e-33 148.3 120 61.7
SMO356G0394 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 5.3e-33 146.4 418 28.5
Mapoly0085s0100 Marchantia polymorpha HOM05D005510 ORTHO05D006750 3.4e-32 143.7 417 27.8
AagrBONN_evm.TU.Sc2ySwM_344.567 Anthoceros agrestis HOM05D005510 ORTHO05D006750 5.8e-32 142.9 434 28.1
Pp3c25_9310 Physcomitrium patens HOM05D005510 ORTHO05D006750 1.0e-31 142.1 417 27.8
CAN.G524.4 Capsicum annuum HOM05D005510 ORTHO05D006750 3.9e-28 130.2 103 61.2
SEGI_32136 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 9.7e-27 125.6 81 72.8
AUR62018455 Chenopodium quinoa HOM05D005510 ORTHO05D006750 1.0e-20 105.5 103 52.4
Zm00001eb341880 Zea mays HOM05D005510 ORTHO05D006750 6.7e-20 102.8 114 47.4
PRCOL_00000521 Prasinoderma coloniale HOM05D005510 ORTHO05D006750 2.0e-19 101.3 263 30.0
MD14G1091800 Malus domestica HOM05D005510 ORTHO05D006750 1.7e-18 98.2 71 60.6
MD14G1091600 Malus domestica HOM05D005510 ORTHO05D006750 6.3e-18 96.3 64 75.0
CAN.G641.39 Capsicum annuum HOM05D005510 ORTHO05D006750 3.4e-16 90.5 78 61.5
CAN.G636.4 Capsicum annuum HOM05D005510 ORTHO05D006750 5.9e-16 89.7 235 31.5
CAN.G524.9 Capsicum annuum HOM05D005510 ORTHO05D020273 3.0e-12 77.4 53 66.0
CDE09G0372 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 1.1e-11 75.5 137 35.0
MD14G1091700 Malus domestica HOM05D005510 ORTHO05D006750 2.9e-07 60.8 59 55.9


User provided reference genes

Program Settings