Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 2.5e-134 482.3 269 100.0
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 3.6e-125 451.8 269 93.3
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 1.6e-120 436.4 270 91.5
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 4.6e-120 434.9 269 92.2
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 4.6e-120 434.9 270 91.1
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 1.7e-119 433.0 269 89.6
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 3.9e-119 431.8 270 90.4
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 1.6e-117 426.4 269 90.3
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 6.2e-117 424.5 273 90.5
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 1.4e-116 423.3 273 90.1
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 1.3e-114 416.8 271 87.1
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 8.4e-106 387.5 243 85.6
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 3.3e-102 375.6 270 79.3
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 8.1e-93 344.4 273 74.7
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 5.1e-87 325.1 272 70.2
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 7.1e-81 304.7 261 67.8
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 1.5e-78 297.0 252 69.0
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 4.3e-78 295.4 256 69.1
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 7.4e-78 294.7 252 69.8
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 1.6e-77 293.5 259 65.3
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 2.1e-77 293.1 252 69.0
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 2.8e-77 292.7 252 69.0
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 6.3e-77 291.6 270 66.7
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 6.3e-77 291.6 267 66.7
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 4.1e-76 288.9 249 67.1
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 4.1e-76 288.9 249 67.5
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 4.1e-76 288.9 273 65.6
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.2e-75 287.3 249 67.5
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.5e-75 287.0 248 66.5
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 2.0e-75 286.6 255 65.9
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 5.9e-75 285.0 254 65.0
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 5.9e-75 285.0 253 67.6
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.0e-74 284.3 248 66.9
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 6.5e-74 281.6 274 60.9
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 3.2e-73 279.3 246 61.8
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 5.5e-73 278.5 254 64.2
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 7.2e-73 278.1 274 60.2
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 7.9e-72 274.6 256 59.0
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 1.8e-71 273.5 256 59.0
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 3.0e-71 272.7 256 60.5
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 2.5e-70 269.6 272 58.1
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 2.5e-70 269.6 258 55.0
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 2.5e-70 269.6 248 66.9
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 3.3e-70 269.2 247 63.2
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 4.3e-70 268.9 253 60.1
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 9.7e-70 267.7 273 61.5
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 1.3e-69 267.3 276 53.3
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 1.3e-69 267.3 259 63.3
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.2e-69 266.5 253 58.1
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.8e-68 263.5 245 62.9
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 3.1e-68 262.7 252 64.7
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 9.1e-68 261.2 271 58.7
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 2.0e-67 260.0 272 61.4
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 4.5e-67 258.8 262 63.0
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 2.9e-66 256.1 251 63.7
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 3.8e-66 255.8 259 61.4
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 6.5e-66 255.0 267 57.7
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.1e-65 254.2 253 62.8
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 3.2e-65 252.7 259 62.9
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 7.9e-64 248.1 253 59.7
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 3.0e-63 246.1 252 57.9
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 3.9e-63 245.7 274 54.0
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 8.8e-63 244.6 257 61.1
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 3.3e-62 242.7 254 57.5
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 5.7e-62 241.9 273 59.0
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 7.4e-62 241.5 287 53.7
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 4.8e-61 238.8 231 61.0
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 1.8e-60 236.9 269 59.1
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 9.1e-60 234.6 265 52.1
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.2e-59 234.2 253 58.1
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 1.2e-59 234.2 256 57.8
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 3.4e-59 232.6 270 54.4
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 5.9e-59 231.9 240 62.1
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 7.7e-59 231.5 224 62.9
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 1.3e-58 230.7 250 58.0
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 3.8e-58 229.2 249 55.4
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 1.2e-56 224.2 248 57.3
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 4.7e-56 222.2 250 57.6
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 1.4e-55 220.7 188 63.3
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 1.4e-55 220.7 253 57.7
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 1.1e-54 217.6 250 56.4
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 1.1e-54 217.6 251 55.8
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 2.6e-54 216.5 250 56.0
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 3.3e-54 216.1 247 58.3
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 1.3e-53 214.2 222 63.1
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 1.4e-52 210.7 194 59.8
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 2.4e-52 209.9 255 54.1
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 3.1e-52 209.5 189 63.0
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 7.0e-52 208.4 206 58.3
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 1.2e-51 207.6 254 54.3
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 2.2e-50 203.4 234 56.8
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 1.1e-49 201.1 256 54.3
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 4.7e-48 195.7 250 52.4
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 8.0e-48 194.9 190 54.2
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 1.8e-47 193.7 255 47.5
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 2.2e-45 186.8 237 50.6
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 1.8e-44 183.7 244 52.0
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 2.9e-42 176.4 154 61.7
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 6.5e-42 175.3 254 43.3
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 9.4e-41 171.4 263 42.2
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.7e-40 169.9 157 61.8
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 4.0e-39 166.0 256 49.6
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.5e-35 152.9 153 52.9
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 3.8e-34 149.4 276 43.5
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 4.2e-33 146.0 261 37.2
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.6e-32 142.9 163 56.4
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 2.3e-31 140.2 125 60.8
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 1.3e-26 124.4 260 37.3
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 8.6e-26 121.7 97 64.9
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 8.6e-26 121.7 97 64.9
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 2.6e-22 110.2 248 39.1
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 1.2e-19 101.3 166 41.0
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 1.1e-17 94.7 216 37.5
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 1.4e-15 87.8 159 40.9
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 8.9e-15 85.1 74 60.8
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 1.7e-13 80.9 208 30.3
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 2.4e-12 77.0 45 71.1
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 1.2e-08 64.7 104 45.2
Zm00001eb116260 Zea mays HOM05D006823 ORTHO05D008608 2.3e-07 60.5 89 44.9
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 6.8e-07 58.9 57 50.9
Zm00001eb044950 Zea mays HOM05D006753 ORTHO05D008521 7.5e-06 55.5 88 34.1


User provided reference genes

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