Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g04760 Schrenkiella parvula HOM05D010123 ORTHO05D012290 1.5e-100 369.8 221 100.0
A07p23750 Brassica napus HOM05D010123 ORTHO05D012290 2.9e-35 152.9 135 64.4
BcaB02g08286 Brassica carinata HOM05D010123 ORTHO05D012290 3.7e-35 152.5 273 42.5
BcaB02g07564 Brassica carinata HOM05D010123 ORTHO05D012290 1.0e-32 144.4 130 61.5
C06p24980 Brassica napus HOM05D010123 ORTHO05D012290 1.1e-31 141.0 133 62.4
BolC6t37650H Brassica oleracea HOM05D010123 ORTHO05D012290 1.1e-31 141.0 133 62.4
BcaC02g09975 Brassica carinata HOM05D010123 ORTHO05D012290 1.5e-31 140.6 291 38.5
BcaC02g09978 Brassica carinata HOM05D010123 ORTHO05D012290 1.5e-31 140.6 291 38.5
C04p34410 Brassica napus HOM05D010123 ORTHO05D012290 1.5e-31 140.6 291 38.5
BolC4t25003H Brassica oleracea HOM05D010123 ORTHO05D012290 1.5e-31 140.6 291 38.5
BraA04t16006Z Brassica rapa HOM05D010123 ORTHO05D012290 8.0e-30 134.8 215 44.2
BcaC08g44881 Brassica carinata HOM05D010123 ORTHO05D012290 2.3e-24 116.7 134 56.0
A04p02820 Brassica napus HOM05D010123 ORTHO05D012290 2.5e-23 113.2 204 42.2
AL5G39610 Arabidopsis lyrata HOM05D010123 ORTHO05D012290 9.5e-23 111.3 254 33.5
BraA07t30028Z Brassica rapa HOM05D010123 ORTHO05D012290 5.8e-20 102.1 105 58.1
BcaC08g44882 Brassica carinata HOM05D010123 ORTHO05D012290 3.2e-18 96.3 134 50.0
Carub.0005s2480 Capsella rubella HOM05D010123 ORTHO05D012290 4.1e-18 95.9 194 37.1
Thhalv10006494m.g Eutrema salsugineum HOM05D010123 ORTHO05D012290 7.8e-17 91.7 91 56.0
AT3G57960 Arabidopsis thaliana HOM05D010123 ORTHO05D012290 1.7e-16 90.5 132 43.2
C06p23620 Brassica napus HOM05D008477 ORTHO05D021917 6.0e-09 65.5 153 35.9
BolC6t37534H Brassica oleracea HOM05D008477 ORTHO05D021917 1.0e-08 64.7 146 36.3
BcaC08g44792 Brassica carinata HOM05D008477 ORTHO05D021917 1.7e-08 63.9 143 35.0
BcaC08g44793 Brassica carinata HOM05D008477 ORTHO05D021917 2.5e-07 60.1 76 48.7
A09p49470 Brassica napus HOM05D008477 ORTHO05D024345 5.6e-07 58.9 146 35.6
BraA07t29962Z Brassica rapa HOM05D008477 ORTHO05D021917 5.6e-07 58.9 145 33.8
BraA09t40400Z Brassica rapa HOM05D008477 ORTHO05D024345 5.6e-07 58.9 146 35.6
Carub.0005s2481 Capsella rubella HOM05D011318 ORTHO05D013413 9.6e-07 58.2 115 35.7
Sp5g04750 Schrenkiella parvula HOM05D011318 ORTHO05D013413 1.6e-06 57.4 223 28.3
A07p22990 Brassica napus HOM05D008477 ORTHO05D021917 2.1e-06 57.0 145 33.8
Aa31LG10G12660 Aethionema arabicum HOM05D010123 ORTHO05D012290 4.7e-06 55.8 121 32.2
Aa31LG10G12670 Aethionema arabicum HOM05D010123 ORTHO05D012290 8.1e-06 55.1 117 34.2


User provided reference genes

Program Settings