Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g03790 Schrenkiella parvula HOM05D002333 ORTHO05D372417 1.0e-67 260.0 137 100.0
Aa31LG10G13670 Aethionema arabicum HOM05D002333 ORTHO05D002485 2.7e-12 75.9 106 46.2
AT3G59310 Arabidopsis thaliana HOM05D002333 ORTHO05D002485 8.0e-12 74.3 144 38.2
Sp5g03780 Schrenkiella parvula HOM05D002333 ORTHO05D002485 1.4e-11 73.6 168 36.9
Carub.0005s2605 Capsella rubella HOM05D002333 ORTHO05D002485 4.4e-10 68.6 126 41.3
THA.LOC104802296 Tarenaya hassleriana HOM05D002333 ORTHO05D002485 4.4e-10 68.6 139 36.0
FAN07G1679 Fragaria x ananassa HOM05D002333 ORTHO05D002485 9.8e-10 67.4 87 52.9
AT3G59340 Arabidopsis thaliana HOM05D002333 ORTHO05D002485 3.7e-09 65.5 82 46.3
Thhalv10006153m.g Eutrema salsugineum HOM05D002333 ORTHO05D002485 6.3e-09 64.7 146 35.6
SMO367G0961 Selaginella moellendorffii HOM05D002333 ORTHO05D002485 6.3e-09 64.7 64 56.2
CARHR169720 Cardamine hirsuta HOM05D002333 ORTHO05D002485 8.3e-09 64.3 129 38.0
COL.COLO4_24370 Corchorus olitorius HOM05D002333 ORTHO05D002485 1.4e-08 63.5 153 34.0
AT3G59320 Arabidopsis thaliana HOM05D002333 ORTHO05D002485 2.4e-08 62.8 148 33.8
BcaB02g08227 Brassica carinata HOM05D002333 ORTHO05D002485 2.4e-08 62.8 82 43.9
RcHm_v2.0_Chr4g0408431 Rosa chinensis HOM05D002333 ORTHO05D002485 2.4e-08 62.8 127 39.4
CiPaw.01G104900 Carya illinoinensis HOM05D002333 ORTHO05D002485 4.1e-08 62.0 126 38.9
Thecc.04G183500 Theobroma cacao HOM05D002333 ORTHO05D002485 4.1e-08 62.0 144 34.7
Ca_25796_v3 Cicer arietinum L. HOM05D002333 ORTHO05D002485 5.4e-08 61.6 65 52.3
FvH4_4g11520 Fragaria vesca HOM05D002333 ORTHO05D002485 5.4e-08 61.6 127 39.4
AL5G41190 Arabidopsis lyrata HOM05D002333 ORTHO05D002485 7.0e-08 61.2 144 32.6
Thhalv10006082m.g Eutrema salsugineum HOM05D002333 ORTHO05D002485 7.0e-08 61.2 155 34.2
BcaC08g44970 Brassica carinata HOM05D002333 ORTHO05D002485 9.1e-08 60.8 154 32.5
C06p26000 Brassica napus HOM05D002333 ORTHO05D002485 9.1e-08 60.8 154 32.5
BolC6t37764H Brassica oleracea HOM05D002333 ORTHO05D002485 9.1e-08 60.8 154 32.5
Duzib212G0485 Durio zibethinus HOM05D002333 ORTHO05D002485 9.1e-08 60.8 149 34.2
Gohir.A10G135000 Gossypium hirsutum HOM05D002333 ORTHO05D002485 9.1e-08 60.8 82 43.9
Hund19952 Selenicereus undatus HOM05D002333 ORTHO05D002485 9.1e-08 60.8 66 50.0
AL5G41200 Arabidopsis lyrata HOM05D002333 ORTHO05D002485 1.2e-07 60.5 82 42.7
FAN22G2067 Fragaria x ananassa HOM05D002333 ORTHO05D002485 1.6e-07 60.1 126 38.1
BraA07t30106Z Brassica rapa HOM05D002333 ORTHO05D002485 2.0e-07 59.7 152 32.2
Carub.0005s2607 Capsella rubella HOM05D002333 ORTHO05D002485 2.0e-07 59.7 155 34.2
CiPaw.02G056800 Carya illinoinensis HOM05D002333 ORTHO05D002485 2.0e-07 59.7 126 37.3
Carub.0005s2606 Capsella rubella HOM05D002333 ORTHO05D002485 3.5e-07 58.9 137 35.8
A07p24610 Brassica napus HOM05D002333 ORTHO05D002485 7.7e-07 57.8 152 31.6
CANSAT78G2059 Cannabis sativa HOM05D002333 ORTHO05D002485 7.7e-07 57.8 65 50.8
FAN04G2915 Fragaria x ananassa HOM05D002333 ORTHO05D002485 7.7e-07 57.8 160 35.0
FAN17G0668 Fragaria x ananassa HOM05D002333 ORTHO05D002485 7.7e-07 57.8 116 39.7
MD04G1036800 Malus domestica HOM05D002333 ORTHO05D002485 7.7e-07 57.8 126 37.3
BcaC02g10051 Brassica carinata HOM05D002333 ORTHO05D002485 1.0e-06 57.4 143 34.3
C04p33470 Brassica napus HOM05D002333 ORTHO05D002485 1.0e-06 57.4 143 34.3
BolC4t24912H Brassica oleracea HOM05D002333 ORTHO05D002485 1.0e-06 57.4 143 34.3
PGR083G0974 Punica granatum HOM05D002333 ORTHO05D002485 1.0e-06 57.4 135 36.3
BraA04t15950Z Brassica rapa HOM05D002333 ORTHO05D002485 1.3e-06 57.0 82 41.5
TWI36G1538 Tripterygium wilfordii HOM05D002333 ORTHO05D002485 1.3e-06 57.0 81 42.0
CSS0003627 Camellia sinensis var. sinensis HOM05D002333 ORTHO05D002485 1.7e-06 56.6 127 36.2
Cfa015786 Carpinus fangiana HOM05D002333 ORTHO05D002485 1.7e-06 56.6 136 33.1
BcaB02g07474 Brassica carinata HOM05D002333 ORTHO05D002485 2.3e-06 56.2 136 34.6
Medtr7g006080 Medicago truncatula HOM05D002333 ORTHO05D002485 2.3e-06 56.2 65 49.2
Glyma.10G296800 Glycine max HOM05D002333 ORTHO05D002485 2.9e-06 55.8 65 49.2
Gohir.A02G014200 Gossypium hirsutum HOM05D002333 ORTHO05D002485 2.9e-06 55.8 145 32.4
Prupe.1G186000 Prunus persica HOM05D002333 ORTHO05D002485 2.9e-06 55.8 126 36.5
Atru.chr3.1640 Acer truncatum HOM05D002333 ORTHO05D002485 3.8e-06 55.5 82 40.2
Duzib151G0866 Durio zibethinus HOM05D002333 ORTHO05D002485 3.8e-06 55.5 149 32.9
arahy.Tifrunner.gnm1.ann1.95866G Arachis hypogaea HOM05D002333 ORTHO05D002485 5.0e-06 55.1 65 47.7
arahy.Tifrunner.gnm1.ann1.G657RZ Arachis hypogaea HOM05D002333 ORTHO05D002485 5.0e-06 55.1 65 47.7
A04p02210 Brassica napus HOM05D002333 ORTHO05D002485 5.0e-06 55.1 148 33.1
Gorai.011G145300 Gossypium raimondii HOM05D002333 ORTHO05D002485 5.0e-06 55.1 145 33.8
Peaxi162Scf00375g01018 Petunia axillaris HOM05D002333 ORTHO05D002485 5.0e-06 55.1 81 40.7
Zm00001eb198310 Zea mays HOM05D002333 ORTHO05D002485 5.0e-06 55.1 82 40.2
Migut.N00469 Erythranthe guttata HOM05D002333 ORTHO05D002485 6.6e-06 54.7 81 40.7
TPR.G15615 Trifolium pratense HOM05D002333 ORTHO05D002485 6.6e-06 54.7 59 50.8
TAR633G1741 Trochodendron aralioides HOM05D002333 ORTHO05D002485 6.6e-06 54.7 127 35.4
CARHR169700 Cardamine hirsuta HOM05D002333 ORTHO05D002485 8.6e-06 54.3 164 31.1
FAN21G3678 Fragaria x ananassa HOM05D002333 ORTHO05D004304 8.6e-06 54.3 97 43.3
Gorai.005G019300 Gossypium raimondii HOM05D002333 ORTHO05D002485 8.6e-06 54.3 145 31.7
Psat3g207440 Pisum sativum HOM05D002333 ORTHO05D002485 8.6e-06 54.3 65 49.2
Rhsim09G0033200 Rhododendron simsii HOM05D002333 ORTHO05D002485 8.6e-06 54.3 138 34.1
VMungo0720G1013 Vigna mungo HOM05D002333 ORTHO05D002485 8.6e-06 54.3 109 38.5


User provided reference genes

Program Settings