Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g03340 Schrenkiella parvula HOM05D004131 ORTHO05D004778 2.9e-65 252.3 187 100.0
Thhalv10006256m.g Eutrema salsugineum HOM05D004131 ORTHO05D004778 1.3e-60 236.9 187 95.7
AT3G59800 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 2.8e-60 235.7 187 94.7
C04p32910 Brassica napus HOM05D004131 ORTHO05D004778 7.7e-58 227.6 187 88.2
A04p02020 Brassica napus HOM05D004131 ORTHO05D004778 3.8e-57 225.3 187 87.7
BcaC02g10087 Brassica carinata HOM05D004131 ORTHO05D004778 5.0e-57 224.9 194 87.6
AL5G41850 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 1.5e-56 223.4 187 89.3
BcaB02g08209 Brassica carinata HOM05D004131 ORTHO05D004778 2.5e-56 222.6 187 87.2
BraA04t15927Z Brassica rapa HOM05D004131 ORTHO05D004778 3.6e-55 218.8 204 79.9
Aa31LG10G14050 Aethionema arabicum HOM05D004131 ORTHO05D004778 2.0e-53 213.0 196 85.7
Sp4g25870 Schrenkiella parvula HOM05D004131 ORTHO05D004778 2.2e-52 209.5 202 81.7
Carub.0004s2633 Capsella rubella HOM05D004131 ORTHO05D004778 4.5e-50 201.8 201 81.6
CARHR138980 Cardamine hirsuta HOM05D004131 ORTHO05D004778 1.0e-49 200.7 205 77.1
BolC4t24854H Brassica oleracea HOM05D004131 ORTHO05D004778 3.8e-49 198.7 108 94.4
BcaB02g08900 Brassica carinata HOM05D004131 ORTHO05D004778 8.5e-49 197.6 205 78.5
THA.LOC104805841 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 2.7e-47 192.6 196 80.1
THA.LOC104804159 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 6.1e-47 191.4 192 82.8
Migut.N03052 Erythranthe guttata HOM05D004131 ORTHO05D004778 8.0e-47 191.0 190 77.4
BolC4t22105H Brassica oleracea HOM05D004131 ORTHO05D004778 2.3e-46 189.5 112 85.7
TWI38G2196 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 4.0e-46 188.7 200 78.0
BcaC02g12362 Brassica carinata HOM05D004131 ORTHO05D004778 8.8e-46 187.6 109 87.2
C04p04750 Brassica napus HOM05D004131 ORTHO05D004778 8.8e-46 187.6 109 87.2
Actinidia18408 Actinidia chinensis HOM05D004131 ORTHO05D004778 2.0e-45 186.4 198 72.7
MD02G1003900 Malus domestica HOM05D004131 ORTHO05D004778 1.3e-44 183.7 201 77.1
Potri.007G139900 Populus trichocarpa HOM05D004131 ORTHO05D004778 1.3e-44 183.7 198 74.2
A05p04000 Brassica napus HOM05D004131 ORTHO05D004778 2.2e-44 183.0 110 86.4
BraA05t19388Z Brassica rapa HOM05D004131 ORTHO05D004778 2.2e-44 183.0 110 86.4
THA.LOC104802336 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 2.2e-44 183.0 192 79.7
TWI63G0908 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 2.2e-44 183.0 200 70.5
ECA130G0002 Erigeron canadensis HOM05D004131 ORTHO05D004778 3.7e-44 182.2 112 83.0
Medtr4g087630 Medicago truncatula HOM05D004131 ORTHO05D004778 3.7e-44 182.2 107 85.0
Lsat_1_v5_gn_7_67880 Lactuca sativa HOM05D004131 ORTHO05D004778 6.3e-44 181.4 206 71.4
Solyc12g019470.2 Solanum lycopersicum HOM05D004131 ORTHO05D004778 8.3e-44 181.0 200 77.5
Sopen12g009750 Solanum pennellii HOM05D004131 ORTHO05D004778 8.3e-44 181.0 200 77.5
ECA233G3286 Erigeron canadensis HOM05D004131 ORTHO05D004778 1.4e-43 180.3 105 84.8
Nitab4.5_0000064g0030 Nicotiana tabacum HOM05D004131 ORTHO05D004778 1.4e-43 180.3 105 84.8
Nitab4.5_0005089g0010 Nicotiana tabacum HOM05D004131 ORTHO05D004778 1.4e-43 180.3 105 84.8
Psat7g119160 Pisum sativum HOM05D004131 ORTHO05D004778 1.8e-43 179.9 107 83.2
TPR.G23549 Trifolium pratense HOM05D004131 ORTHO05D004778 1.8e-43 179.9 107 83.2
Potri.017G010100 Populus trichocarpa HOM05D004131 ORTHO05D004778 3.1e-43 179.1 198 74.7
Sabra07G0117600 Salix brachista HOM05D004131 ORTHO05D004778 3.1e-43 179.1 199 71.9
PGSC0003DMG400005367 Solanum tuberosum HOM05D004131 ORTHO05D004778 3.1e-43 179.1 200 75.5
Ca_18622_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 4.1e-43 178.7 110 80.9
Ca_18628_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 4.1e-43 178.7 110 80.9
Sabra07G0113200 Salix brachista HOM05D004131 ORTHO05D004778 5.4e-43 178.3 199 70.4
Dinv18309 Davidia involucrata HOM05D004131 ORTHO05D004778 7.0e-43 177.9 110 79.1
Peaxi162Scf00483g00111 Petunia axillaris HOM05D004131 ORTHO05D004778 7.0e-43 177.9 103 85.4
CSS0004184 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 9.1e-43 177.6 195 77.4
Ciclev10022332m.g Citrus clementina HOM05D004131 ORTHO05D004778 9.1e-43 177.6 200 73.5
TAR636G2398 Trochodendron aralioides HOM05D004131 ORTHO05D004778 9.1e-43 177.6 200 65.0
Migut.G00833 Erythranthe guttata HOM05D004131 ORTHO05D004778 1.2e-42 177.2 201 75.1
Nn7g37517 Nelumbo nucifera HOM05D004131 ORTHO05D004778 1.2e-42 177.2 202 76.2
Lalb_Chr16g0384341 Lupinus albus HOM05D004131 ORTHO05D004778 1.6e-42 176.8 198 69.7
unitig_8.g3637 Utricularia gibba HOM05D004131 ORTHO05D004778 2.0e-42 176.4 110 80.9
Atru.chr4.1513 Acer truncatum HOM05D004131 ORTHO05D004778 2.7e-42 176.0 211 67.8
HanXRQChr02g0059071 Helianthus annuus HOM05D004131 ORTHO05D004778 2.7e-42 176.0 102 85.3
Manes.01G017500 Manihot esculenta HOM05D004131 ORTHO05D004778 2.7e-42 176.0 199 74.4
Phvul.003G059400 Phaseolus vulgaris HOM05D004131 ORTHO05D004778 2.7e-42 176.0 107 81.3
RcHm_v2.0_Chr2g0084981 Rosa chinensis HOM05D004131 ORTHO05D004778 2.7e-42 176.0 106 82.1
Lj6C265T11 Lonicera japonica HOM05D004131 ORTHO05D004778 4.5e-42 175.3 111 81.1
MD15G1147200 Malus domestica HOM05D004131 ORTHO05D004778 4.5e-42 175.3 106 82.1
GSVIVG01038193001 Vitis vinifera HOM05D004131 ORTHO05D004778 4.5e-42 175.3 110 80.0
MSTRG.24561 Avicennia marina HOM05D004131 ORTHO05D004778 5.9e-42 174.9 198 72.2
CAN.G448.4 Capsicum annuum HOM05D004131 ORTHO05D004778 7.7e-42 174.5 103 83.5
COL.COLO4_04655 Corchorus olitorius HOM05D004131 ORTHO05D004778 7.7e-42 174.5 108 79.6
FAN23G0024 Fragaria x ananassa HOM05D004131 ORTHO05D004778 7.7e-42 174.5 106 80.2
FAN26G1335 Fragaria x ananassa HOM05D004131 ORTHO05D004778 7.7e-42 174.5 106 80.2
Glyma.07G206100 Glycine max HOM05D004131 ORTHO05D004778 7.7e-42 174.5 110 79.1
Lj4g0014155 Lotus japonicus HOM05D004131 ORTHO05D004778 7.7e-42 174.5 112 78.6
Cfa021469 Carpinus fangiana HOM05D004131 ORTHO05D004778 1.0e-41 174.1 110 80.0
FvH4_1g00470 Fragaria vesca HOM05D004131 ORTHO05D004778 1.0e-41 174.1 110 78.2
Gorai.011G132700 Gossypium raimondii HOM05D004131 ORTHO05D004778 1.0e-41 174.1 110 78.2
SalBow3G2571 Salvia bowleyana HOM05D004131 ORTHO05D004778 1.0e-41 174.1 103 84.5
Duzib268G1863 Durio zibethinus HOM05D004131 ORTHO05D004778 1.3e-41 173.7 115 76.5
CANSAT56G2001 Cannabis sativa HOM05D004131 ORTHO05D004778 2.3e-41 172.9 102 83.3
Gohir.A10G146200 Gossypium hirsutum HOM05D004131 ORTHO05D004778 2.3e-41 172.9 110 77.3
Gohir.D10G120800 Gossypium hirsutum HOM05D004131 ORTHO05D004778 2.3e-41 172.9 110 77.3
FAN28G1052 Fragaria x ananassa HOM05D004131 ORTHO05D004778 2.9e-41 172.6 110 77.3
CiPaw.01G198800 Carya illinoinensis HOM05D004131 ORTHO05D004778 5.0e-41 171.8 202 73.8
Glyma.02G138900 Glycine max HOM05D004131 ORTHO05D004778 5.0e-41 171.8 112 77.7
Cc03_g14990 Coffea canephora HOM05D004131 ORTHO05D004778 8.6e-41 171.0 110 76.4
PSO017G4173 Papaver somniferum HOM05D004131 ORTHO05D004778 1.1e-40 170.6 107 79.4
PSO675G2278 Papaver somniferum HOM05D004131 ORTHO05D004778 1.1e-40 170.6 111 77.5
ATR0743G176 Amborella trichopoda HOM05D004131 ORTHO05D004778 1.5e-40 170.2 110 77.3
CARHR170140 Cardamine hirsuta HOM05D004131 ORTHO05D004778 1.5e-40 170.2 149 94.6
MBI07_g36705_MAGBIO Magnolia biondii HOM05D004131 ORTHO05D004778 1.5e-40 170.2 107 81.3
SalBow6G7192 Salvia bowleyana HOM05D004131 ORTHO05D004778 1.5e-40 170.2 202 73.8
Duzib212G0438 Durio zibethinus HOM05D004131 ORTHO05D004778 1.9e-40 169.9 110 75.5
Dinv33225 Davidia involucrata HOM05D004131 ORTHO05D004778 2.5e-40 169.5 112 74.1
Prupe.7G267400 Prunus persica HOM05D004131 ORTHO05D004778 2.5e-40 169.5 117 75.2
Ah.13g073340 Amaranthus hybridus HOM05D004131 ORTHO05D004778 3.3e-40 169.1 110 76.4
Aqoxy2G04165 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 3.3e-40 169.1 110 75.5
CSS0028329 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 3.3e-40 169.1 112 75.0
Lalb_Chr05g0218801 Lupinus albus HOM05D004131 ORTHO05D004778 5.6e-40 168.3 112 75.9
Actinidia28972 Actinidia chinensis HOM05D004131 ORTHO05D004778 7.2e-40 167.9 103 78.6
CDE08G0022 Ceratophyllum demersum HOM05D004131 ORTHO05D004778 7.2e-40 167.9 106 78.3
Haze_11173 Corylus avellana HOM05D004131 ORTHO05D004778 7.2e-40 167.9 112 77.7
Haze_11178 Corylus avellana HOM05D004131 ORTHO05D004778 7.2e-40 167.9 112 77.7
CSS0000211 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 2.1e-39 166.4 103 78.6
CSS0046112 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 2.1e-39 166.4 103 78.6
CsaV3_5G040580 Cucumis sativus L. HOM05D004131 ORTHO05D004778 2.1e-39 166.4 202 70.8
TAR362G1052 Trochodendron aralioides HOM05D004131 ORTHO05D004778 2.1e-39 166.4 110 75.5
Sc13g0007290 Simmondsia chinensis HOM05D004131 ORTHO05D004778 3.6e-39 165.6 101 79.2
HPP92_023727 Vanilla planifolia HOM05D004131 ORTHO05D004778 3.6e-39 165.6 110 76.4
EL10Ac3g06119 Beta vulgaris HOM05D004131 ORTHO05D004778 6.1e-39 164.9 103 78.6
CiPaw.02G123300 Carya illinoinensis HOM05D004131 ORTHO05D004778 8.0e-39 164.5 200 72.5
AUR62002422 Chenopodium quinoa HOM05D004131 ORTHO05D004778 2.3e-38 162.9 112 75.0
AUR62023766 Chenopodium quinoa HOM05D004131 ORTHO05D004778 3.0e-38 162.5 112 75.0
Hund12374 Selenicereus undatus HOM05D004131 ORTHO05D004778 3.0e-38 162.5 103 75.7
MELO3C022231.2 Cucumis melo HOM05D004131 ORTHO05D004778 4.0e-38 162.2 111 73.9
Eucgr.G01598 Eucalyptus grandis HOM05D004131 ORTHO05D004778 2.0e-37 159.8 101 76.2
Eucgr.L00027 Eucalyptus grandis HOM05D004131 ORTHO05D004778 2.0e-37 159.8 101 76.2
Zm00001eb425720 Zea mays HOM05D004131 ORTHO05D004778 2.6e-37 159.5 105 77.1
arahy.Tifrunner.gnm1.ann1.GY80IK Arachis hypogaea HOM05D004131 ORTHO05D004778 3.7e-36 155.6 222 67.6
Ah.07g202990 Amaranthus hybridus HOM05D004131 ORTHO05D004778 1.1e-35 154.1 101 74.3
Sabra17G0009400 Salix brachista HOM05D004131 ORTHO05D004778 1.1e-35 154.1 139 61.2
AagrBONN_evm.TU.Sc2ySwM_344.2765 Anthoceros agrestis HOM05D004131 ORTHO05D004778 1.1e-32 144.1 112 62.5
AT2G43795 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 4.3e-32 142.1 81 86.4
Mapoly0055s0100 Marchantia polymorpha HOM05D004131 ORTHO05D004778 4.3e-32 142.1 113 62.8
Pp3c3_18840 Physcomitrium patens HOM05D004131 ORTHO05D004778 4.3e-32 142.1 118 63.6
vmacro15701 Vaccinium macrocarpon HOM05D004131 ORTHO05D004778 4.3e-32 142.1 164 51.2
BcaC07g40454 Brassica carinata HOM05D004131 ORTHO05D004778 7.3e-32 141.4 157 77.7
AL4G42670 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 1.2e-31 140.6 81 85.2
Lju470A13T20 Lonicera japonica HOM05D004131 ORTHO05D004778 6.2e-31 138.3 188 46.8
SMO364G0381 Selaginella moellendorffii HOM05D004131 ORTHO05D004778 1.4e-30 137.1 111 62.2
VMungo0251G3663 Vigna mungo HOM05D004131 ORTHO05D004778 1.4e-30 137.1 169 74.0
BcaB02g08224 Brassica carinata HOM05D004131 ORTHO05D004778 6.8e-30 134.8 142 69.7
Sed0002263 Sechium edule HOM05D004131 ORTHO05D004778 7.5e-29 131.3 81 80.2
Rhsim02G0086100 Rhododendron simsii HOM05D004131 ORTHO05D004778 1.3e-28 130.6 191 43.5
Lju470A13G17 Lonicera japonica HOM05D004131 ORTHO05D004778 4.9e-28 128.6 79 81.0
PGR042G3815 Punica granatum HOM05D004131 ORTHO05D004778 6.4e-28 128.3 79 77.2
C08p34760 Brassica napus HOM05D004131 ORTHO05D004778 3.5e-26 122.5 158 49.4
BolC8t51078H Brassica oleracea HOM05D004131 ORTHO05D004778 3.5e-26 122.5 158 49.4
Aqoxy604s001 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 3.9e-25 119.0 124 56.5
Actinidia11437 Actinidia chinensis HOM05D004131 ORTHO05D004778 5.0e-25 118.6 71 77.5
RhsimUnG0015600 Rhododendron simsii HOM05D004131 ORTHO05D004778 1.1e-24 117.5 225 36.9
SEGI_19170 Sequoiadendron giganteum HOM05D004131 ORTHO05D004778 1.6e-23 113.6 86 66.3
QL10p058548 Quercus lobata HOM05D004131 ORTHO05D004778 2.8e-23 112.8 65 86.2
QL10p059325 Quercus lobata HOM05D004131 ORTHO05D004778 2.8e-23 112.8 65 86.2
Carub.0005s2652 Capsella rubella HOM05D004131 ORTHO05D004778 3.1e-22 109.4 121 94.2
BraA09t40640Z Brassica rapa HOM05D004131 ORTHO05D004778 9.8e-21 104.4 82 70.7
BcaC07g40508 Brassica carinata HOM05D004131 ORTHO05D004778 3.7e-20 102.4 79 70.9
BcaC07g40452 Brassica carinata HOM05D004131 ORTHO05D004778 6.4e-20 101.7 127 90.6
Oeu050314.3 Olea europaea HOM05D004131 ORTHO05D004778 1.6e-18 97.1 220 59.1
BcaB05g25107 Brassica carinata HOM05D004131 ORTHO05D004778 7.8e-18 94.7 125 72.0
CBR_g6538 Chara braunii HOM05D004131 ORTHO05D004778 1.0e-17 94.4 74 60.8
Cre16.g660850 Chlamydomonas reinhardtii HOM05D004131 ORTHO05D004778 3.9e-17 92.4 102 52.0
BcaB05g25112 Brassica carinata HOM05D004131 ORTHO05D004778 6.6e-17 91.7 125 72.8
Lj6C255T9 Lonicera japonica HOM05D004131 ORTHO05D004778 1.9e-16 90.1 75 66.7
BcaB02g07200 Brassica carinata HOM05D004131 ORTHO05D004778 2.5e-16 89.7 124 74.2
ClCG08G000030 Citrullus lanatus HOM05D004131 ORTHO05D004778 1.4e-14 84.0 111 48.6
SGA_v2.0_scaffold37G14924 Striga asiatica HOM05D004131 ORTHO05D004778 1.8e-14 83.6 252 45.6
BcaB05g25109 Brassica carinata HOM05D004131 ORTHO05D004778 1.1e-11 74.3 115 70.4
BcaB05g25110 Brassica carinata HOM05D004131 ORTHO05D004778 3.2e-11 72.8 115 70.4
Sed0017538 Sechium edule HOM05D004131 ORTHO05D004778 2.1e-10 70.1 34 91.2
QL10p059329 Quercus lobata HOM05D004131 ORTHO05D004778 3.5e-10 69.3 137 68.6
BcaB02g07199 Brassica carinata HOM05D004131 ORTHO05D004778 1.7e-09 67.0 41 85.4
MSTRG.9725 Avicennia marina HOM05D005043 ORTHO05D000110 3.9e-09 65.9 88 46.6
QL10p058544 Quercus lobata HOM05D004131 ORTHO05D004778 3.9e-09 65.9 49 69.4
Thecc.04G162100 Theobroma cacao HOM05D004131 ORTHO05D004778 6.6e-09 65.1 48 68.8
BcaNung06582 Brassica carinata HOM05D004131 ORTHO05D004778 1.9e-08 63.5 41 82.9
BcaB05g25113 Brassica carinata HOM05D004131 ORTHO05D004778 9.6e-08 61.2 47 74.5
BcaB05g25118 Brassica carinata HOM05D004131 ORTHO05D004778 9.6e-08 61.2 48 72.9
BcaB05g25117 Brassica carinata HOM05D004131 ORTHO05D004778 2.8e-07 59.7 47 72.3
Lju470A13T22 Lonicera japonica HOM05D004131 ORTHO05D004778 4.7e-07 58.9 49 67.3
A09p52080 Brassica napus HOM05D004131 ORTHO05D004778 4.0e-06 55.8 31 87.1


User provided reference genes

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