Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g01230 Schrenkiella parvula HOM05D006141 ORTHO05D007670 3.1e-103 378.6 215 100.0
Thhalv10006233m.g Eutrema salsugineum HOM05D006141 ORTHO05D007670 1.4e-87 326.6 216 84.7
AL5G44810 Arabidopsis lyrata HOM05D006141 ORTHO05D007670 1.8e-87 326.2 215 83.7
AT3G62140 Arabidopsis thaliana HOM05D006141 ORTHO05D007670 3.5e-86 322.0 215 81.9
Carub.0005s2889 Capsella rubella HOM05D006141 ORTHO05D007670 2.0e-81 306.2 215 79.5
CARHR172480 Cardamine hirsuta HOM05D006141 ORTHO05D007670 2.9e-77 292.4 209 78.0
C06p28110 Brassica napus HOM05D006141 ORTHO05D007670 5.2e-74 281.6 215 74.9
BolC6t37977H Brassica oleracea HOM05D006141 ORTHO05D007670 5.2e-74 281.6 215 74.9
BcaC07g40706 Brassica carinata HOM05D006141 ORTHO05D007670 7.0e-71 271.2 214 78.5
A07p25870 Brassica napus HOM05D006141 ORTHO05D007670 1.2e-70 270.4 215 74.0
C08p37090 Brassica napus HOM05D006141 ORTHO05D007670 1.2e-70 270.4 214 78.5
BolC8t51287H Brassica oleracea HOM05D006141 ORTHO05D007670 1.2e-70 270.4 214 78.5
A09p54230 Brassica napus HOM05D006141 ORTHO05D007670 2.7e-70 269.2 216 78.7
BraA09t40835Z Brassica rapa HOM05D006141 ORTHO05D007670 2.7e-70 269.2 216 78.7
Aa31LG10G16170 Aethionema arabicum HOM05D006141 ORTHO05D007670 2.9e-69 265.8 215 71.6
BcaB02g07358 Brassica carinata HOM05D002572 ORTHO05D002800 2.3e-66 256.1 197 74.1
THA.LOC104817433 Tarenaya hassleriana HOM05D006141 ORTHO05D007670 3.6e-59 232.3 213 64.3
Atru.chr5.866 Acer truncatum HOM05D006141 ORTHO05D007670 1.7e-56 223.4 224 59.8
Gohir.A08G036900 Gossypium hirsutum HOM05D006141 ORTHO05D007670 2.4e-55 219.5 215 60.9
Gohir.D08G047500 Gossypium hirsutum HOM05D006141 ORTHO05D007670 9.2e-55 217.6 215 62.8
Manes.01G234600 Manihot esculenta HOM05D006141 ORTHO05D007670 3.5e-54 215.7 215 60.5
Gorai.004G046700 Gossypium raimondii HOM05D006141 ORTHO05D007670 5.9e-54 214.9 215 59.5
Thecc.01G324800 Theobroma cacao HOM05D006141 ORTHO05D007670 5.9e-54 214.9 216 59.3
Duzib138G1179 Durio zibethinus HOM05D006141 ORTHO05D007670 1.0e-53 214.2 213 59.2
QL12p034897 Quercus lobata HOM05D006141 ORTHO05D007670 1.7e-53 213.4 215 59.5
Cfa004908 Carpinus fangiana HOM05D006141 ORTHO05D007670 5.0e-53 211.8 216 59.3
Glyma.03G224200 Glycine max HOM05D006141 ORTHO05D007670 8.6e-53 211.1 213 58.2
COL.COLO4_23134 Corchorus olitorius HOM05D006141 ORTHO05D007670 1.1e-52 210.7 213 57.7
PGR042G1406 Punica granatum HOM05D006141 ORTHO05D007670 1.1e-52 210.7 215 59.1
CiPaw.08G082900 Carya illinoinensis HOM05D006141 ORTHO05D007670 1.9e-52 209.9 216 57.9
TPR.G2465 Trifolium pratense HOM05D006141 ORTHO05D007670 1.9e-52 209.9 215 58.6
Ciclev10022224m.g Citrus clementina HOM05D006141 ORTHO05D007670 4.3e-52 208.8 214 57.0
TWI59G0338 Tripterygium wilfordii HOM05D006141 ORTHO05D007670 5.6e-52 208.4 215 59.1
VMungo1383G2247 Vigna mungo HOM05D006141 ORTHO05D007670 5.6e-52 208.4 215 58.6
Glyma.19G221200 Glycine max HOM05D006141 ORTHO05D007670 7.3e-52 208.0 213 57.3
Nn4g25355 Nelumbo nucifera HOM05D006141 ORTHO05D007670 1.2e-51 207.2 216 59.7
Ca_09244_v3 Cicer arietinum L. HOM05D006141 ORTHO05D007670 1.6e-51 206.8 215 57.2
CANSAT25G1526 Cannabis sativa HOM05D006141 ORTHO05D007670 2.8e-51 206.1 216 56.9
Ah.11g045950 Amaranthus hybridus HOM05D006141 ORTHO05D007670 3.6e-51 205.7 220 55.5
Sabra14G0083000 Salix brachista HOM05D006141 ORTHO05D007670 3.6e-51 205.7 216 58.3
TAR362G0148 Trochodendron aralioides HOM05D006141 ORTHO05D007670 3.6e-51 205.7 217 57.6
Medtr7g110620 Medicago truncatula HOM05D006141 ORTHO05D007670 4.7e-51 205.3 215 57.2
Lalb_Chr18g0046401 Lupinus albus HOM05D006141 ORTHO05D007670 1.8e-50 203.4 213 56.8
Phvul.001G218100 Phaseolus vulgaris HOM05D006141 ORTHO05D007670 1.8e-50 203.4 215 58.1
BcaC08g45187 Brassica carinata HOM05D006141 ORTHO05D007670 3.1e-50 202.6 119 90.8
Sed0006054 Sechium edule HOM05D006141 ORTHO05D007670 3.1e-50 202.6 221 56.1
Psat3g016880 Pisum sativum HOM05D006141 ORTHO05D007670 4.0e-50 202.2 215 57.2
Potri.014G112900 Populus trichocarpa HOM05D006141 ORTHO05D007670 4.0e-50 202.2 215 59.5
ClCG01G007160 Citrullus lanatus HOM05D006141 ORTHO05D007670 1.2e-49 200.7 217 57.1
Sopen01g030090 Solanum pennellii HOM05D006141 ORTHO05D007670 1.2e-49 200.7 228 54.4
HanXRQChr06g0167971 Helianthus annuus HOM05D006141 ORTHO05D007670 1.5e-49 200.3 216 56.9
CsaV3_5G018600 Cucumis sativus L. HOM05D006141 ORTHO05D007670 5.8e-49 198.4 225 55.1
Actinidia20966 Actinidia chinensis HOM05D006141 ORTHO05D007670 7.5e-49 198.0 208 60.1
Migut.D00015 Erythranthe guttata HOM05D006141 ORTHO05D007670 7.5e-49 198.0 214 54.2
SGA_v2.0_scaffold417G51257 Striga asiatica HOM05D006141 ORTHO05D007670 7.5e-49 198.0 215 55.3
MELO3C005194.2 Cucumis melo HOM05D006141 ORTHO05D007670 1.7e-48 196.8 218 56.9
Nitab4.5_0000222g0340 Nicotiana tabacum HOM05D006141 ORTHO05D007670 3.7e-48 195.7 229 54.6
CDE09G0801 Ceratophyllum demersum HOM05D006141 ORTHO05D007670 6.4e-48 194.9 215 54.4
FAN19G0972 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.1e-47 194.1 220 55.5
Hma1.2p1_0408F.1_g146310 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 1.4e-47 193.7 215 55.8
arahy.Tifrunner.gnm1.ann1.3ZI6V8 Arachis hypogaea HOM05D006141 ORTHO05D007670 1.9e-47 193.4 229 52.0
DCAR_012301 Daucus carota HOM05D006141 ORTHO05D007670 1.9e-47 193.4 210 56.2
arahy.Tifrunner.gnm1.ann1.XETR8R Arachis hypogaea HOM05D006141 ORTHO05D007670 2.4e-47 193.0 233 51.1
Prupe.3G003000 Prunus persica HOM05D006141 ORTHO05D007670 3.2e-47 192.6 213 54.9
AUR62001013 Chenopodium quinoa HOM05D006141 ORTHO05D007670 4.1e-47 192.2 233 51.9
FvH4_1g26260 Fragaria vesca HOM05D006141 ORTHO05D007670 4.1e-47 192.2 219 54.3
RcHm_v2.0_Chr3g0485921 Rosa chinensis HOM05D006141 ORTHO05D007670 5.4e-47 191.8 214 56.5
arahy.Tifrunner.gnm1.ann1.YFT3VK Arachis hypogaea HOM05D006141 ORTHO05D007670 7.0e-47 191.4 229 51.1
FAN28G2755 Fragaria x ananassa HOM05D006141 ORTHO05D007670 9.2e-47 191.0 215 56.3
FAN23G3136 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.2e-46 190.7 215 56.3
Aqoxy2G02498 Aquilegia oxysepala HOM05D006141 ORTHO05D007670 1.6e-46 190.3 216 55.6
Solyc01g068150.3 Solanum lycopersicum HOM05D006141 ORTHO05D007670 2.0e-46 189.9 217 54.4
MD17G1284800 Malus domestica HOM05D006141 ORTHO05D007670 2.7e-46 189.5 214 53.7
GSVIVG01028253001 Vitis vinifera HOM05D006141 ORTHO05D007670 3.5e-46 189.1 210 56.7
AUR62004945 Chenopodium quinoa HOM05D006141 ORTHO05D007670 4.6e-46 188.7 233 51.5
MSTRG.21729 Avicennia marina HOM05D006141 ORTHO05D007670 1.0e-45 187.6 216 53.2
Rhsim01G0000200 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.3e-45 187.2 206 55.8
ATR0796G189 Amborella trichopoda HOM05D006141 ORTHO05D007670 1.7e-45 186.8 208 55.3
MBI18_g10378_MAGBIO Magnolia biondii HOM05D006141 ORTHO05D007670 2.3e-45 186.4 217 53.0
CSS0000718 Camellia sinensis var. sinensis HOM05D006141 ORTHO05D007670 5.0e-45 185.3 177 60.5
Cpa.g.sc57.10 Carica papaya HOM05D006141 ORTHO05D007670 5.6e-44 181.8 118 80.5
HPP92_018284 Vanilla planifolia HOM05D006141 ORTHO05D007670 5.6e-44 181.8 211 55.0
ECA236G4451 Erigeron canadensis HOM05D006141 ORTHO05D007670 9.5e-44 181.0 210 54.8
Cc01_g21800 Coffea canephora HOM05D006141 ORTHO05D007670 1.6e-43 180.3 215 51.2
FAN26G1012 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.6e-43 180.3 236 51.7
PSO761G0605 Papaver somniferum HOM05D006141 ORTHO05D007670 3.6e-43 179.1 214 54.2
SalBow6G5482 Salvia bowleyana HOM05D006141 ORTHO05D007670 3.6e-43 179.1 207 51.7
PSO210G0852 Papaver somniferum HOM05D006141 ORTHO05D007670 1.4e-42 177.2 214 53.7
Dinv33165 Davidia involucrata HOM05D006141 ORTHO05D007670 2.3e-42 176.4 141 65.2
Lsat_1_v5_gn_8_167241 Lactuca sativa HOM05D006141 ORTHO05D007670 5.2e-42 175.3 203 54.2
EL10Ac6g14128 Beta vulgaris HOM05D006141 ORTHO05D007670 4.4e-41 172.2 222 51.4
Os01g0321800 Oryza sativa ssp. japonica HOM05D006141 ORTHO05D007670 6.4e-40 168.3 211 52.1
Hma1.2p1_0408F.1_g146320 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 1.4e-39 167.2 116 74.1
Peaxi162Scf00309g01021 Petunia axillaris HOM05D006141 ORTHO05D007670 1.4e-39 167.2 230 50.0
BcaB02g07360 Brassica carinata HOM05D006141 ORTHO05D007670 5.4e-39 165.2 91 93.4
SEGI_07518 Sequoiadendron giganteum HOM05D006141 ORTHO05D007670 7.1e-39 164.9 208 48.6
unitig_578.g16642 Utricularia gibba HOM05D006141 ORTHO05D007670 1.3e-37 160.6 154 56.5
BraA07t30234Z Brassica rapa HOM05D006141 ORTHO05D007670 6.6e-37 158.3 88 92.0
Zm00001eb340460 Zea mays HOM05D006141 ORTHO05D007670 3.3e-36 156.0 107 72.9
CAN.G100.55 Capsicum annuum HOM05D006141 ORTHO05D007670 8.1e-35 151.4 109 75.2
Rhsim01G0080900 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.4e-34 150.6 158 55.1
Rhsim01G0085900 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.0e-29 134.4 213 41.3
Lj2A1216T56 Lonicera japonica HOM05D006141 ORTHO05D007670 1.8e-26 123.6 82 79.3
Ciclev10030010m.g Citrus clementina HOM05D006141 ORTHO05D007670 3.1e-26 122.9 205 42.0
Ciclev10030249m.g Citrus clementina HOM05D006141 ORTHO05D007670 6.9e-26 121.7 160 48.8
Ciclev10030079m.g Citrus clementina HOM05D006141 ORTHO05D007670 8.9e-26 121.3 160 48.1
Lj1g0014608 Lotus japonicus HOM05D006141 ORTHO05D007670 3.2e-23 112.8 213 41.8
Mapoly0026s0067 Marchantia polymorpha HOM05D006141 ORTHO05D007670 7.1e-23 111.7 210 39.0
Pp3c2_35190 Physcomitrium patens HOM05D006141 ORTHO05D007670 3.9e-21 105.9 205 39.5
Rhsim01G0086800 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.5e-20 104.0 214 38.3
SHI33165 Sapria himalayana HOM05D006141 ORTHO05D007670 5.3e-18 95.5 134 44.8
BcaC09g48717 Brassica carinata HOM05D001214 ORTHO05D001029 7.1e-15 85.1 45 93.3
Haze_05144 Corylus avellana HOM05D006141 ORTHO05D007670 3.9e-13 79.3 216 34.3
CBR_g57079 Chara braunii HOM05D006141 ORTHO05D007670 1.5e-12 77.4 67 61.2
AagrBONN_evm.TU.Sc2ySwM_368.766 Anthoceros agrestis HOM05D006141 ORTHO05D007670 4.3e-12 75.9 151 37.7
Rhsim01G0081900 Rhododendron simsii HOM05D006141 ORTHO05D007670 4.3e-12 75.9 53 71.7
FAN03G1225 Fragaria x ananassa HOM05D006141 ORTHO05D007670 2.8e-11 73.2 44 77.3
Rhsim01G0082900 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.4e-10 70.9 147 36.1
DCAR_012300 Daucus carota HOM05D006141 ORTHO05D007670 2.1e-06 57.0 38 65.8
Rhsim12G0140700 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.1e-06 57.0 155 37.4
MCO02G477 Micromonas commoda HOM05D006141 ORTHO05D007670 7.9e-06 55.1 97 36.1


User provided reference genes

Program Settings