Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 1.7e-35 152.1 75 100.0
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 2.0e-33 145.2 75 93.3
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 3.4e-33 144.4 75 93.3
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 5.9e-33 143.7 75 92.0
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 5.9e-33 143.7 75 92.0
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 3.8e-32 141.0 74 89.2
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 3.8e-32 141.0 74 89.2
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 1.9e-31 138.7 75 86.7
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 4.2e-31 137.5 75 88.0
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 1.2e-30 136.0 75 86.7
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 3.6e-30 134.4 75 85.3
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 3.3e-28 127.9 71 83.1
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 1.3e-27 125.9 71 81.7
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 1.7e-27 125.6 71 81.7
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 2.8e-27 124.8 64 92.2
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 3.7e-27 124.4 69 87.0
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 3.7e-27 124.4 69 87.0
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 3.7e-27 124.4 69 87.0
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 8.2e-27 123.2 71 81.7
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 1.4e-26 122.5 66 89.4
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 3.1e-26 121.3 68 83.8
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 5.3e-26 120.6 68 83.8
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 5.3e-26 120.6 68 83.8
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 5.3e-26 120.6 68 83.8
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 5.3e-26 120.6 68 83.8
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 5.3e-26 120.6 68 80.9
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 7.0e-26 120.2 73 76.7
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 7.0e-26 120.2 68 82.4
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 9.1e-26 119.8 68 83.8
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 1.2e-25 119.4 69 82.6
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 1.5e-25 119.0 68 79.4
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 2.0e-25 118.6 69 81.2
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 2.0e-25 118.6 69 81.2
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 3.5e-25 117.9 69 81.2
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 4.5e-25 117.5 68 79.4
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 4.5e-25 117.5 68 80.9
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 5.9e-25 117.1 70 78.6
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 5.9e-25 117.1 69 79.7
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 5.9e-25 117.1 69 78.3
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 7.7e-25 116.7 69 76.8
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 7.7e-25 116.7 68 80.9
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 7.7e-25 116.7 68 80.9
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 1.0e-24 116.3 73 72.6
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 1.7e-24 115.5 68 77.9
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 1.7e-24 115.5 69 79.7
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 2.2e-24 115.2 67 77.6
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 2.2e-24 115.2 69 75.4
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 2.2e-24 115.2 69 78.3
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 2.9e-24 114.8 68 80.9
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 2.9e-24 114.8 69 78.3
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 3.8e-24 114.4 68 77.9
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 5.0e-24 114.0 69 76.8
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 6.5e-24 113.6 69 78.3
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 8.5e-24 113.2 72 72.2
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 8.5e-24 113.2 73 71.2
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 1.4e-23 112.5 69 75.4
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 1.9e-23 112.1 68 76.5
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 1.9e-23 112.1 68 76.5
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 2.5e-23 111.7 70 78.6
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 2.5e-23 111.7 70 72.9
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 2.5e-23 111.7 68 76.5
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 3.2e-23 111.3 68 77.9
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 5.5e-23 110.5 68 76.5
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 7.2e-23 110.2 68 75.0
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 9.4e-23 109.8 70 72.9
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 1.6e-22 109.0 72 76.4
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 2.7e-22 108.2 68 73.5
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 2.7e-22 108.2 68 73.5
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 3.6e-22 107.8 69 71.0
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 1.0e-21 106.3 71 73.2
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 1.4e-21 105.9 71 70.4
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 1.4e-21 105.9 81 64.2
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.8e-21 105.5 65 75.4
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 2.3e-21 105.1 65 73.8
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 2.0e-20 102.1 69 73.9
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 2.6e-20 101.7 68 70.6
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 2.2e-19 98.6 69 69.6
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 2.8e-19 98.2 71 63.4
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 8.2e-19 96.7 81 60.5
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 1.1e-18 96.3 65 70.8
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 1.8e-18 95.5 75 68.0
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 1.8e-18 95.5 49 91.8
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 2.4e-18 95.1 69 65.2
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 4.1e-18 94.4 65 69.2
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 5.3e-18 94.0 82 59.8
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 5.3e-18 94.0 94 55.3
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 7.0e-18 93.6 68 70.6
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 2.2e-16 88.6 69 65.2
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 5.0e-16 87.4 62 64.5
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 1.1e-15 86.3 71 63.4
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 1.5e-15 85.9 133 40.6
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 2.5e-15 85.1 51 78.4
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 1.2e-14 82.8 49 79.6
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 2.1e-14 82.0 127 40.2
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 1.4e-10 69.3 39 84.6
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 2.4e-10 68.6 40 77.5
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 2.4e-10 68.6 164 31.1
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 7.0e-10 67.0 39 82.1
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 1.6e-09 65.9 35 85.7
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 1.6e-09 65.9 57 61.4
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 2.0e-09 65.5 40 72.5
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 1.3e-08 62.8 40 72.5
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 1.3e-08 62.8 48 58.3
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 2.2e-08 62.0 39 74.4
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 2.9e-08 61.6 40 72.5
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 2.9e-08 61.6 37 70.3
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 5.0e-08 60.8 39 71.8
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 1.9e-07 58.9 34 76.5
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 4.2e-07 57.8 31 77.4
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 7.2e-07 57.0 39 66.7
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 7.2e-07 57.0 65 46.2
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 9.4e-07 56.6 40 60.0
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 3.6e-06 54.7 35 74.3
Actinidia00061 Actinidia chinensis HOM05D006941 ORTHO05D008361 6.1e-06 53.9 32 75.0
HanXRQChr10g0285751 Helianthus annuus HOM05D006941 ORTHO05D008361 8.0e-06 53.5 30 76.7


User provided reference genes

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