Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g00290 Schrenkiella parvula HOM05D004770 ORTHO05D005572 3.8e-85 318.2 164 100.0
A06p36610 Brassica napus HOM05D004770 ORTHO05D005572 2.2e-80 302.4 164 93.3
BraA06t26586Z Brassica rapa HOM05D004770 ORTHO05D005572 2.2e-80 302.4 164 93.3
Thhalv10004885m.g Eutrema salsugineum HOM05D004770 ORTHO05D005572 2.8e-80 302.0 164 93.9
BcaNung02803 Brassica carinata HOM05D004770 ORTHO05D005572 3.7e-80 301.6 164 93.3
BcaNung03978 Brassica carinata HOM05D004770 ORTHO05D005572 1.1e-79 300.1 164 92.1
Sp2g21620 Schrenkiella parvula HOM05D004770 ORTHO05D005572 1.8e-79 299.3 164 92.7
AL2G11930 Arabidopsis lyrata HOM05D004770 ORTHO05D005572 5.9e-78 294.3 164 92.7
Aa31LG10G17080 Aethionema arabicum HOM05D004770 ORTHO05D005572 7.7e-78 293.9 164 90.9
CARHR187390 Cardamine hirsuta HOM05D004770 ORTHO05D005572 7.7e-78 293.9 164 90.9
AT5G26110 Arabidopsis thaliana HOM05D004770 ORTHO05D005572 1.7e-77 292.7 164 90.9
Carub.0005s0602 Capsella rubella HOM05D004770 ORTHO05D005572 1.9e-76 289.3 164 89.6
Carub.0006s2388 Capsella rubella HOM05D004770 ORTHO05D005572 2.3e-74 282.3 164 88.4
AL2G11990 Arabidopsis lyrata HOM05D004770 ORTHO05D005572 3.0e-74 282.0 160 90.6
THA.LOC104817561 Tarenaya hassleriana HOM05D004770 ORTHO05D005572 1.5e-73 279.6 164 84.8
C07p41870 Brassica napus HOM05D004770 ORTHO05D005572 2.0e-73 279.3 151 92.7
PGR031G3940 Punica granatum HOM05D004770 ORTHO05D005572 7.4e-73 277.3 164 82.9
Eucgr.G02085 Eucalyptus grandis HOM05D004770 ORTHO05D005572 9.7e-73 276.9 164 82.9
Oeu025750.1 Olea europaea HOM05D004770 ORTHO05D005572 1.3e-72 276.6 164 82.9
Atru.chr5.1488 Acer truncatum HOM05D004770 ORTHO05D005572 1.7e-72 276.2 164 82.3
CSS0005681 Camellia sinensis var. sinensis HOM05D004770 ORTHO05D005572 1.7e-72 276.2 164 82.9
Manes.01G205200 Manihot esculenta HOM05D004770 ORTHO05D005572 2.2e-72 275.8 164 81.7
Potri.002G049900 Populus trichocarpa HOM05D004770 ORTHO05D005572 2.2e-72 275.8 164 82.9
Sabra02G0040800 Salix brachista HOM05D004770 ORTHO05D005572 2.2e-72 275.8 164 83.5
Duzib138G1187 Durio zibethinus HOM05D004770 ORTHO05D005572 2.8e-72 275.4 164 81.7
Actinidia24914 Actinidia chinensis HOM05D004770 ORTHO05D005572 1.1e-71 273.5 164 79.9
CiPaw.07G089000 Carya illinoinensis HOM05D004770 ORTHO05D005572 1.1e-71 273.5 164 81.7
Nn1g02388 Nelumbo nucifera HOM05D004770 ORTHO05D005572 1.1e-71 273.5 164 81.7
Potri.005G212800 Populus trichocarpa HOM05D004770 ORTHO05D005572 1.1e-71 273.5 164 83.5
Thecc.01G273700 Theobroma cacao HOM05D004770 ORTHO05D005572 1.4e-71 273.1 164 81.1
CSS0032403 Camellia sinensis var. sinensis HOM05D004770 ORTHO05D005572 1.8e-71 272.7 164 82.3
Lj1A49T61 Lonicera japonica HOM05D004770 ORTHO05D005572 1.8e-71 272.7 164 82.9
Haze_04673 Corylus avellana HOM05D004770 ORTHO05D005572 2.4e-71 272.3 162 82.1
arahy.Tifrunner.gnm1.ann1.RIN6C8 Arachis hypogaea HOM05D004770 ORTHO05D005572 3.1e-71 271.9 164 82.3
arahy.Tifrunner.gnm1.ann1.W9SXTW Arachis hypogaea HOM05D004770 ORTHO05D005572 3.1e-71 271.9 164 82.3
arahy.Tifrunner.gnm1.ann1.YE39MU Arachis hypogaea HOM05D004770 ORTHO05D005572 3.1e-71 271.9 164 82.3
Hma1.2p1_2357F.1_g320590 Hydrangea macrophylla HOM05D004770 ORTHO05D005572 3.1e-71 271.9 164 80.5
vmacro02598 Vaccinium macrocarpon HOM05D004770 ORTHO05D005572 3.1e-71 271.9 165 81.2
Ciclev10022091m.g Citrus clementina HOM05D004770 ORTHO05D005572 4.1e-71 271.6 164 82.3
Lj3A581T22 Lonicera japonica HOM05D004770 ORTHO05D005572 4.1e-71 271.6 164 82.3
QL01p010878 Quercus lobata HOM05D004770 ORTHO05D005572 4.1e-71 271.6 163 82.8
Sabra05G0162600 Salix brachista HOM05D004770 ORTHO05D005572 4.1e-71 271.6 164 83.5
SGA_v2.0_scaffold1G00513 Striga asiatica HOM05D004770 ORTHO05D005572 4.1e-71 271.6 164 81.7
Cc01_g06090 Coffea canephora HOM05D004770 ORTHO05D005572 5.3e-71 271.2 164 81.7
AUR62012543 Chenopodium quinoa HOM05D004770 ORTHO05D005572 7.0e-71 270.8 164 81.1
Nn6g34126 Nelumbo nucifera HOM05D004770 ORTHO05D005572 9.1e-71 270.4 164 80.5
Cfa006174 Carpinus fangiana HOM05D004770 ORTHO05D005572 1.2e-70 270.0 164 80.5
TAR362G0723 Trochodendron aralioides HOM05D004770 ORTHO05D005572 1.2e-70 270.0 164 81.7
DCAR_012498 Daucus carota HOM05D004770 ORTHO05D005572 1.6e-70 269.6 164 81.7
Gorai.008G003100 Gossypium raimondii HOM05D004770 ORTHO05D005572 1.6e-70 269.6 164 79.9
COL.COLO4_09057 Corchorus olitorius HOM05D001769 ORTHO05D001695 2.0e-70 269.2 164 79.9
MBI02_g08255_MAGBIO Magnolia biondii HOM05D004770 ORTHO05D005572 2.6e-70 268.9 164 82.3
CANSAT80G2828 Cannabis sativa HOM05D004770 ORTHO05D005572 3.5e-70 268.5 164 82.3
Gohir.D12G003300 Gossypium hirsutum HOM05D004770 ORTHO05D005572 4.5e-70 268.1 164 79.3
arahy.Tifrunner.gnm1.ann1.S84LE1 Arachis hypogaea HOM05D004770 ORTHO05D005572 5.9e-70 267.7 164 81.1
TWI39G0629 Tripterygium wilfordii HOM05D004770 ORTHO05D005572 7.7e-70 267.3 164 80.5
Gohir.A12G003600 Gossypium hirsutum HOM05D004770 ORTHO05D005572 1.3e-69 266.5 164 79.3
BolC7t44719H Brassica oleracea HOM05D004770 ORTHO05D005572 1.7e-69 266.2 174 80.5
ClCG03G016560 Citrullus lanatus HOM05D004770 ORTHO05D005572 1.7e-69 266.2 164 79.3
Glyma.17G044400 Glycine max HOM05D004770 ORTHO05D005572 1.7e-69 266.2 164 80.5
AUR62032312 Chenopodium quinoa HOM05D004770 ORTHO05D005572 2.2e-69 265.8 164 80.5
ECA248G2232 Erigeron canadensis HOM05D004770 ORTHO05D005572 2.2e-69 265.8 164 78.7
Glyma.18G056100 Glycine max HOM05D004770 ORTHO05D005572 2.9e-69 265.4 164 80.5
MBI15_g39353_MAGBIO Magnolia biondii HOM05D004770 ORTHO05D005572 2.9e-69 265.4 164 81.1
Aqoxy2G03435 Aquilegia oxysepala HOM05D004770 ORTHO05D005572 3.8e-69 265.0 164 81.1
Phvul.007G249400 Phaseolus vulgaris HOM05D004770 ORTHO05D005572 5.0e-69 264.6 164 79.9
Lalb_Chr18g0051481 Lupinus albus HOM05D004770 ORTHO05D005572 8.5e-69 263.8 164 80.5
Migut.D00330 Erythranthe guttata HOM05D004770 ORTHO05D005572 1.5e-68 263.1 163 81.6
SalBow4G2779 Salvia bowleyana HOM05D004770 ORTHO05D005572 1.5e-68 263.1 163 81.0
SalBow7G1168 Salvia bowleyana HOM05D004770 ORTHO05D005572 1.5e-68 263.1 164 80.5
EL10Ac5g10525 Beta vulgaris HOM05D004770 ORTHO05D005572 1.9e-68 262.7 164 79.3
Dinv34783 Davidia involucrata HOM05D004770 ORTHO05D005572 1.9e-68 262.7 164 79.9
HanXRQChr08g0213371 Helianthus annuus HOM05D004770 ORTHO05D005572 1.9e-68 262.7 164 78.7
GSVIVG01001190001 Vitis vinifera HOM05D004770 ORTHO05D005572 2.5e-68 262.3 164 79.3
Migut.N02033 Erythranthe guttata HOM05D004770 ORTHO05D005572 3.2e-68 261.9 164 80.5
Medtr3g465790 Medicago truncatula HOM05D004770 ORTHO05D005572 3.2e-68 261.9 163 79.1
Lj6g0011383 Lotus japonicus HOM05D004770 ORTHO05D005572 4.2e-68 261.5 164 78.7
MD11G1280900 Malus domestica HOM05D004770 ORTHO05D005572 4.2e-68 261.5 166 78.9
Ca_15021_v3 Cicer arietinum L. HOM05D004770 ORTHO05D005572 5.5e-68 261.2 163 79.1
MELO3C015367.2 Cucumis melo HOM05D004770 ORTHO05D005572 5.5e-68 261.2 164 78.0
Nitab4.5_0000208g0100 Nicotiana tabacum HOM05D004770 ORTHO05D005572 5.5e-68 261.2 164 79.3
Nitab4.5_0000759g0280 Nicotiana tabacum HOM05D004770 ORTHO05D005572 7.2e-68 260.8 164 78.7
Actinidia00788 Actinidia chinensis HOM05D004770 ORTHO05D005572 1.6e-67 259.6 155 80.0
FAN20G2343 Fragaria x ananassa HOM05D004770 ORTHO05D005572 1.6e-67 259.6 166 78.9
Lj3g0010058 Lotus japonicus HOM05D004770 ORTHO05D005572 2.1e-67 259.2 164 78.0
PSO832G1010 Papaver somniferum HOM05D004770 ORTHO05D005572 2.7e-67 258.8 164 77.4
HPP92_017651 Vanilla planifolia HOM05D004770 ORTHO05D005572 2.7e-67 258.8 164 77.4
CAN.G1549.26 Capsicum annuum HOM05D004770 ORTHO05D005572 3.6e-67 258.5 164 78.7
CsaV3_1G039420 Cucumis sativus L. HOM05D004770 ORTHO05D005572 3.6e-67 258.5 164 77.4
FAN27G1754 Fragaria x ananassa HOM05D004770 ORTHO05D005572 3.6e-67 258.5 166 78.3
Phvul.006G075100 Phaseolus vulgaris HOM05D004770 ORTHO05D005572 8.0e-67 257.3 164 78.0
Solyc06g084160.4 Solanum lycopersicum HOM05D004770 ORTHO05D005572 8.0e-67 257.3 164 78.0
VMungo0540G0250 Vigna mungo HOM05D004770 ORTHO05D005572 8.0e-67 257.3 164 78.7
CAN.G1549.14 Capsicum annuum HOM05D004770 ORTHO05D005572 1.0e-66 256.9 164 78.0
RcHm_v2.0_Chr6g0290401 Rosa chinensis HOM05D004770 ORTHO05D005572 1.0e-66 256.9 166 78.3
PGSC0003DMG400020135 Solanum tuberosum HOM05D004770 ORTHO05D005572 2.3e-66 255.8 164 77.4
Zm00001eb222890 Zea mays HOM05D004770 ORTHO05D005572 2.3e-66 255.8 164 74.4
Sopen06g035540 Solanum pennellii HOM05D004770 ORTHO05D005572 3.0e-66 255.4 164 77.4
PSO170G2661 Papaver somniferum HOM05D004770 ORTHO05D005572 6.7e-66 254.2 164 77.4
Lsat_1_v5_gn_5_186200 Lactuca sativa HOM05D004770 ORTHO05D005572 1.5e-65 253.1 161 76.4
Sed0021970 Sechium edule HOM05D004770 ORTHO05D005572 3.3e-65 251.9 163 76.1
Solyc08g005140.3 Solanum lycopersicum HOM05D004770 ORTHO05D005572 3.3e-65 251.9 164 77.4
Sopen08g001150 Solanum pennellii HOM05D004770 ORTHO05D005572 9.7e-65 250.4 164 77.4
QL01p011010 Quercus lobata HOM05D004770 ORTHO05D005572 2.2e-64 249.2 193 67.9
Rhsim13G0027500 Rhododendron simsii HOM05D004770 ORTHO05D005572 2.2e-64 249.2 150 79.3
vmacro14906 Vaccinium macrocarpon HOM05D004770 ORTHO05D005572 3.7e-64 248.4 151 78.8
VMungo0720G0347 Vigna mungo HOM05D004770 ORTHO05D005572 1.4e-63 246.5 151 80.1
unitig_0.g135 Utricularia gibba HOM05D004770 ORTHO05D005572 7.0e-63 244.2 151 79.5
ATR0665G226 Amborella trichopoda HOM05D004770 ORTHO05D005572 1.6e-62 243.0 152 79.6
Prupe.8G236800 Prunus persica HOM05D004770 ORTHO05D005572 2.7e-62 242.3 156 77.6
SGA_v2.0_scaffold80G25747 Striga asiatica HOM05D004770 ORTHO05D005572 2.7e-62 242.3 150 79.3
Cpa.g.sc41.63 Carica papaya HOM05D004770 ORTHO05D005572 4.5e-62 241.5 151 78.8
FvH4_2g23150 Fragaria vesca HOM05D004770 ORTHO05D005572 4.5e-62 241.5 197 66.0
TPR.G25688 Trifolium pratense HOM05D004770 ORTHO05D005572 7.7e-62 240.7 149 79.2
Nitab4.5_0004355g0020 Nicotiana tabacum HOM05D004770 ORTHO05D005572 2.9e-61 238.8 151 77.5
Psat2g184920 Pisum sativum HOM05D004770 ORTHO05D005572 2.9e-61 238.8 201 62.7
PGSC0003DMG400017838 Solanum tuberosum HOM05D004770 ORTHO05D005572 2.9e-61 238.8 151 78.8
DCAR_002713 Daucus carota HOM05D004770 ORTHO05D005572 2.5e-60 235.7 151 76.2
PSO210G1988 Papaver somniferum HOM05D004770 ORTHO05D005572 5.5e-60 234.6 164 73.2
SEGI_22603 Sequoiadendron giganteum HOM05D004770 ORTHO05D005572 4.7e-59 231.5 164 71.3
Hund02843 Selenicereus undatus HOM05D004770 ORTHO05D005572 1.8e-58 229.6 151 73.5
SEGI_19127 Sequoiadendron giganteum HOM05D004770 ORTHO05D005572 2.6e-57 225.7 162 69.8
Mapoly0133s0052 Marchantia polymorpha HOM05D004770 ORTHO05D005572 1.3e-53 213.4 164 64.0
AagrBONN_evm.TU.Sc2ySwM_362.2288 Anthoceros agrestis HOM05D004770 ORTHO05D005572 2.9e-53 212.2 164 64.6
QL12p020786 Quercus lobata HOM05D004770 ORTHO05D005572 3.3e-52 208.8 127 80.3
Lj2g0018175 Lotus japonicus HOM05D004770 ORTHO05D005572 5.5e-52 208.0 132 75.8
Pp3c15_20330 Physcomitrium patens HOM05D004770 ORTHO05D005572 8.0e-51 204.1 164 62.8
Peaxi162Scf00783g00122 Petunia axillaris HOM05D004770 ORTHO05D005572 3.0e-50 202.2 127 76.4
Nitab4.5_0006132g0020 Nicotiana tabacum HOM05D004770 ORTHO05D005572 1.2e-49 200.3 128 75.0
SMO358G0317 Selaginella moellendorffii HOM05D004770 ORTHO05D005572 6.3e-48 194.5 164 62.2
CBR_g40454 Chara braunii HOM05D004770 ORTHO05D005572 6.1e-43 177.9 187 50.8
Manes.05G078700 Manihot esculenta HOM05D004770 ORTHO05D005572 3.0e-42 175.6 164 58.5
CSS0010466 Camellia sinensis var. sinensis HOM05D004770 ORTHO05D005572 6.4e-40 167.9 136 66.9
Zm00001eb031460 Zea mays HOM05D004770 ORTHO05D005572 4.1e-39 165.2 124 66.1
Actinidia09114 Actinidia chinensis HOM05D004770 ORTHO05D005572 5.4e-39 164.9 115 67.0
MCO10G359 Micromonas commoda HOM05D004770 ORTHO05D005572 4.6e-38 161.8 165 52.1
Lsat_1_v5_gn_3_83521 Lactuca sativa HOM05D004770 ORTHO05D005572 3.6e-35 152.1 101 70.3
Psat6g025640 Pisum sativum HOM05D004770 ORTHO05D005572 1.8e-34 149.8 104 72.1
Sc05g0001180 Simmondsia chinensis HOM05D004770 ORTHO05D005572 3.7e-32 142.1 90 73.3
Actinidia21133 Actinidia chinensis HOM05D004770 ORTHO05D005572 3.3e-28 129.0 109 63.3
SHI22269 Sapria himalayana HOM05D004770 ORTHO05D005572 2.1e-27 126.3 90 65.6
Zm00001eb432290 Zea mays HOM05D004770 ORTHO05D005572 2.1e-27 126.3 92 62.0
Glyma.02G191000 Glycine max HOM05D004770 ORTHO05D005572 1.1e-23 114.0 135 48.1
TAR633G0687 Trochodendron aralioides HOM05D004770 ORTHO05D005572 8.1e-19 97.8 50 96.0
BcaC03g17841 Brassica carinata HOM05D004770 ORTHO05D005572 2.6e-17 92.8 68 70.6
CDE04G0604 Ceratophyllum demersum HOM05D004770 ORTHO05D005572 1.7e-13 80.1 59 57.6
TAR636G2941 Trochodendron aralioides HOM05D004770 ORTHO05D005572 1.1e-12 77.4 97 45.4
GSVIVG01020385001 Vitis vinifera HOM05D004770 ORTHO05D005572 1.5e-12 77.0 114 41.2
Cre06.g306800 Chlamydomonas reinhardtii HOM05D004770 ORTHO05D005572 3.3e-12 75.9 208 29.8
GSVIVG01017585001 Vitis vinifera HOM05D004770 ORTHO05D005572 2.2e-08 63.2 63 57.1
RcHm_v2.0_Chr3g0476231 Rosa chinensis HOM05D004770 ORTHO05D005572 8.4e-08 61.2 42 69.0


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