Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.5e-111 406.4 235 100.0
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.5e-111 406.4 235 100.0
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 5.4e-101 371.3 238 82.8
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 5.4e-101 371.3 238 82.8
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 9.3e-101 370.5 238 82.4
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 1.6e-100 369.8 238 81.9
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 6.0e-100 367.9 235 82.6
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 8.7e-99 364.0 233 82.0
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 2.5e-98 362.5 233 81.5
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 7.3e-98 360.9 232 84.1
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 2.1e-89 332.8 230 76.1
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 2.0e-87 326.2 214 80.8
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 1.5e-79 300.1 234 69.7
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 7.6e-79 297.7 246 75.6
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 4.9e-78 295.0 236 65.7
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 2.1e-76 289.7 243 66.3
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 2.7e-76 289.3 239 67.4
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 2.7e-76 289.3 243 66.3
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 1.8e-75 286.6 235 69.8
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 1.5e-74 283.5 236 63.6
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 1.5e-74 283.5 239 64.0
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 1.9e-74 283.1 173 79.8
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 9.6e-74 280.8 241 62.7
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 1.6e-73 280.0 244 61.9
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 1.1e-72 277.3 246 61.8
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 3.1e-72 275.8 173 76.9
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 4.1e-72 275.4 179 74.3
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 5.3e-72 275.0 173 76.9
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 9.0e-72 274.2 247 58.7
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 1.5e-71 273.5 234 65.8
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 1.5e-71 273.5 172 81.4
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 2.6e-71 272.7 171 76.6
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 3.4e-71 272.3 172 73.3
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 4.5e-71 271.9 173 75.7
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 7.6e-71 271.2 142 93.7
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 7.6e-71 271.2 212 69.8
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 7.6e-71 271.2 239 60.7
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 7.6e-71 271.2 173 75.7
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 1.0e-70 270.8 200 68.5
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 1.3e-70 270.4 173 75.1
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 1.3e-70 270.4 170 76.5
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 1.7e-70 270.0 245 58.8
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 2.9e-70 269.2 221 64.3
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 2.9e-70 269.2 171 75.4
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 5.0e-70 268.5 173 74.0
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 5.0e-70 268.5 172 73.8
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 6.5e-70 268.1 249 59.8
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 6.5e-70 268.1 239 61.1
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 8.4e-70 267.7 173 74.0
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 1.4e-69 266.9 250 59.2
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 1.9e-69 266.5 170 75.3
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 2.5e-69 266.2 172 73.3
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 2.5e-69 266.2 170 72.9
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 4.2e-69 265.4 236 66.5
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 4.2e-69 265.4 228 59.6
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 4.2e-69 265.4 172 73.3
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 4.2e-69 265.4 172 74.4
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 4.2e-69 265.4 173 72.3
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 5.5e-69 265.0 242 59.5
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 7.2e-69 264.6 222 60.8
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 7.2e-69 264.6 213 71.4
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 7.2e-69 264.6 179 73.2
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 1.2e-68 263.8 170 74.7
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 1.2e-68 263.8 170 74.7
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 1.2e-68 263.8 170 74.1
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 2.1e-68 263.1 175 70.9
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 2.1e-68 263.1 175 70.9
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 2.7e-68 262.7 179 71.5
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 3.5e-68 262.3 173 72.3
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 1.0e-67 260.8 171 74.3
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 1.0e-67 260.8 210 63.3
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 1.8e-67 260.0 173 69.9
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 2.3e-67 259.6 171 73.7
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 3.0e-67 259.2 245 60.8
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 3.9e-67 258.8 173 71.1
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 5.1e-67 258.5 241 68.5
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 5.1e-67 258.5 171 71.9
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 6.7e-67 258.1 232 62.1
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 8.7e-67 257.7 172 70.9
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 1.1e-66 257.3 172 76.7
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 2.5e-66 256.1 172 70.9
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 2.5e-66 256.1 154 78.6
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 2.5e-66 256.1 154 78.6
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 4.3e-66 255.4 240 57.1
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 1.6e-65 253.4 227 59.5
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 2.4e-64 249.6 173 69.9
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 3.1e-64 249.2 241 60.2
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 1.5e-63 246.9 227 58.1
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 1.0e-62 244.2 173 70.5
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 1.3e-62 243.8 197 65.5
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 2.9e-62 242.7 246 61.4
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 1.9e-61 240.0 247 63.2
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 1.0e-59 234.2 220 54.5
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 2.3e-59 233.0 166 69.9
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 2.0e-58 229.9 170 71.8
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 1.3e-57 227.3 177 63.3
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 2.4e-56 223.0 173 67.1
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 3.1e-56 222.6 173 62.4
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 4.1e-56 222.2 170 64.1
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 3.4e-55 219.2 173 59.0
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 1.0e-54 217.6 179 57.0
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 1.0e-54 217.6 179 57.0
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 1.4e-53 213.8 204 59.8
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 9.4e-53 211.1 181 55.2
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 1.1e-50 204.1 133 75.2
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 1.4e-48 197.2 170 54.1
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 1.0e-46 191.0 126 73.0
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 7.2e-45 184.9 223 44.8
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 1.4e-43 180.6 128 70.3
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 2.6e-42 176.4 125 72.0
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 3.7e-41 172.6 120 69.2
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 4.7e-36 155.6 106 75.5
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 4.3e-21 105.9 173 38.7
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 7.5e-18 95.1 69 63.8
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 5.9e-15 85.5 175 28.0
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 1.1e-13 81.3 180 32.2
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 2.8e-12 76.6 55 67.3
HanXRQChr05g0160801 Helianthus annuus HOM05D006773 ORTHO05D008775 4.1e-08 62.8 152 28.9
Hund17393 Selenicereus undatus HOM05D006773 ORTHO05D008775 1.2e-07 61.2 152 27.6
Thhalv10006150m.g Eutrema salsugineum HOM05D006647 ORTHO05D008232 8.6e-06 55.1 40 80.0


User provided reference genes

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