Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g00030 Schrenkiella parvula HOM05D003920 ORTHO05D004877 3.3e-136 488.4 252 100.0
Sp1g00020 Schrenkiella parvula HOM05D003920 ORTHO05D004877 2.7e-122 442.2 354 70.9
Thhalv10010518m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 1.3e-116 423.3 340 69.7
CARHR291420 Cardamine hirsuta HOM05D003920 ORTHO05D004877 2.2e-116 422.5 343 69.7
BcaC07g37767 Brassica carinata HOM05D003920 ORTHO05D004877 7.8e-114 414.1 329 70.2
BraA08t33064Z Brassica rapa HOM05D003920 ORTHO05D004877 1.3e-113 413.3 330 69.4
A08p28590 Brassica napus HOM05D003920 ORTHO05D004877 7.1e-107 391.0 318 67.9
Aa31LG10G17420 Aethionema arabicum HOM05D003920 ORTHO05D004877 2.3e-105 386.0 423 55.6
Thhalv10023829m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 6.0e-98 361.3 346 61.8
Eucgr.J01264 Eucalyptus grandis HOM05D003920 ORTHO05D004877 4.8e-95 351.7 361 56.8
Gohir.D08G038400 Gossypium hirsutum HOM05D003920 ORTHO05D004877 9.0e-94 347.4 360 55.8
Carub.0005s3016 Capsella rubella HOM05D003920 ORTHO05D004877 2.0e-93 346.3 316 63.9
AL5G46410 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 2.6e-93 345.9 319 63.3
Gorai.004G036900 Gossypium raimondii HOM05D003920 ORTHO05D004877 5.8e-93 344.7 360 55.6
Psat5g204200 Pisum sativum HOM05D003920 ORTHO05D004877 7.6e-93 344.4 356 55.3
Gohir.A08G027700 Gossypium hirsutum HOM05D003920 ORTHO05D004877 9.9e-93 344.0 360 55.6
BolC8t48154H Brassica oleracea HOM05D003920 ORTHO05D004877 1.3e-92 343.6 294 66.3
Ca_27172_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 1.3e-92 343.6 356 55.3
ECA248G0446 Erigeron canadensis HOM05D003920 ORTHO05D004877 1.3e-92 343.6 345 57.4
Lj3g0003225 Lotus japonicus HOM05D003920 ORTHO05D004877 1.3e-92 343.6 358 55.3
Glyma.15G272400 Glycine max HOM05D003920 ORTHO05D004877 1.7e-92 343.2 362 54.7
Phvul.005G019900 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 2.2e-92 342.8 362 54.4
Glyma.08G153800 Glycine max HOM05D003920 ORTHO05D004877 2.9e-92 342.4 362 54.7
A08p10660 Brassica napus HOM05D003920 ORTHO05D004877 3.8e-92 342.0 297 65.0
Sc10g0000010 Simmondsia chinensis HOM05D003920 ORTHO05D004877 4.9e-92 341.7 322 59.3
FAN06G2354 Fragaria x ananassa HOM05D003920 ORTHO05D004877 6.4e-92 341.3 362 54.4
AT3G08505 Arabidopsis thaliana HOM05D003920 ORTHO05D004877 1.1e-91 340.5 322 58.7
FvH4_7g00890 Fragaria vesca HOM05D003920 ORTHO05D004877 1.1e-91 340.5 362 54.1
CARHR082810 Cardamine hirsuta HOM05D003920 ORTHO05D004877 1.9e-91 339.7 317 59.6
arahy.Tifrunner.gnm1.ann1.Z50281 Arachis hypogaea HOM05D003920 ORTHO05D004877 2.5e-91 339.3 357 54.6
Medtr3g028190 Medicago truncatula HOM05D003920 ORTHO05D004877 2.5e-91 339.3 356 54.5
Sabra09G0046300 Salix brachista HOM05D003920 ORTHO05D004877 3.2e-91 339.0 357 55.2
Lalb_Chr01g0015291 Lupinus albus HOM05D003920 ORTHO05D004877 4.2e-91 338.6 356 54.8
MD02G1313900 Malus domestica HOM05D003920 ORTHO05D004877 4.2e-91 338.6 361 54.3
TWI73G0359 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 1.2e-90 337.0 380 53.4
DCAR_022405 Daucus carota HOM05D003920 ORTHO05D004877 1.6e-90 336.7 359 53.5
Dinv43454 Davidia involucrata HOM05D003920 ORTHO05D004877 1.6e-90 336.7 361 54.0
Prupe.2G011700 Prunus persica HOM05D003920 ORTHO05D004877 2.1e-90 336.3 366 54.1
DCAR_003208 Daucus carota HOM05D003920 ORTHO05D004877 3.5e-90 335.5 358 53.9
Aqoxy2G00138 Aquilegia oxysepala HOM05D003920 ORTHO05D004877 6.0e-90 334.7 358 54.2
BolC8t49780H Brassica oleracea HOM05D003920 ORTHO05D004877 6.0e-90 334.7 291 64.9
Rhsim07G0054700 Rhododendron simsii HOM05D003920 ORTHO05D004877 7.9e-90 334.3 351 54.4
AL3G19480 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 1.0e-89 334.0 321 58.6
Potri.001G268200 Populus trichocarpa HOM05D003920 ORTHO05D004877 2.3e-89 332.8 359 54.0
MD07G1008500 Malus domestica HOM05D003920 ORTHO05D004877 8.7e-89 330.9 361 53.5
Peaxi162Scf00407g00639 Petunia axillaris HOM05D003920 ORTHO05D004877 1.9e-88 329.7 359 52.6
TPR.G12140 Trifolium pratense HOM05D003920 ORTHO05D004877 1.9e-88 329.7 346 54.6
HanXRQChr01g0016141 Helianthus annuus HOM05D003920 ORTHO05D004877 2.5e-88 329.3 345 54.5
Potri.009G062600 Populus trichocarpa HOM05D003920 ORTHO05D004877 2.5e-88 329.3 359 54.3
Sabra16G0164300 Salix brachista HOM05D003920 ORTHO05D004877 2.5e-88 329.3 359 53.8
Thhalv10021103m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 3.3e-88 328.9 335 56.1
Nn7g36164 Nelumbo nucifera HOM05D003920 ORTHO05D004877 4.3e-88 328.6 352 54.3
PGR044G2195 Punica granatum HOM05D003920 ORTHO05D004877 4.3e-88 328.6 363 52.6
Manes.10G144700 Manihot esculenta HOM05D003920 ORTHO05D004877 5.6e-88 328.2 360 53.1
Nn2g15431 Nelumbo nucifera HOM05D003920 ORTHO05D004877 5.6e-88 328.2 352 54.0
BraA03t12740Z Brassica rapa HOM05D003920 ORTHO05D004877 7.4e-88 327.8 295 62.4
BcaB03g11569 Brassica carinata HOM05D003920 ORTHO05D004877 1.6e-87 326.6 291 62.5
arahy.Tifrunner.gnm1.ann1.LBVL0K Arachis hypogaea HOM05D003920 ORTHO05D004877 2.8e-87 325.9 356 53.7
Gorai.004G173300 Gossypium raimondii HOM05D003920 ORTHO05D004877 4.8e-87 325.1 357 53.2
PSO339G5616 Papaver somniferum HOM05D003920 ORTHO05D004877 4.8e-87 325.1 363 52.6
BcaC01g04265 Brassica carinata HOM05D003920 ORTHO05D004877 1.4e-86 323.6 283 64.0
BolC3t16599H Brassica oleracea HOM05D003920 ORTHO05D004877 1.4e-86 323.6 293 62.8
Sp3g06990 Schrenkiella parvula HOM05D003920 ORTHO05D004877 1.4e-86 323.6 337 55.2
MSTRG.5016 Avicennia marina HOM05D003920 ORTHO05D004877 1.8e-86 323.2 315 57.8
BcaC07g39147 Brassica carinata HOM05D003920 ORTHO05D004877 1.8e-86 323.2 283 57.6
BcaC09g47976 Brassica carinata HOM05D003920 ORTHO05D004877 2.4e-86 322.8 313 58.1
Peaxi162Scf00428g00618 Petunia axillaris HOM05D003920 ORTHO05D004877 4.0e-86 322.0 360 52.5
A03p35650 Brassica napus HOM05D003920 ORTHO05D004877 5.3e-86 321.6 282 63.1
Sed0011667 Sechium edule HOM05D003920 ORTHO05D004877 5.3e-86 321.6 358 51.4
COL.COLO4_23923 Corchorus olitorius HOM05D003920 ORTHO05D004877 1.2e-85 320.5 246 64.2
PSO384G3532 Papaver somniferum HOM05D003920 ORTHO05D004877 3.4e-85 318.9 363 52.1
Solyc10g038000.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 3.4e-85 318.9 360 52.5
Sopen10g011530 Solanum pennellii HOM05D003920 ORTHO05D004877 4.5e-85 318.5 360 52.2
Carub.0003s0765 Capsella rubella HOM05D003920 ORTHO05D004877 7.6e-85 317.8 328 56.1
unitig_85.g27216 Utricularia gibba HOM05D003920 ORTHO05D004877 7.6e-85 317.8 338 48.5
MSTRG.20593 Avicennia marina HOM05D003920 ORTHO05D004877 1.0e-84 317.4 312 57.1
C03p43290 Brassica napus HOM05D003920 ORTHO05D004877 1.0e-84 317.4 280 63.6
BraA01t04343Z Brassica rapa HOM05D003920 ORTHO05D004877 1.3e-84 317.0 312 57.4
CAN.G709.1 Capsicum annuum HOM05D003920 ORTHO05D004877 1.3e-84 317.0 349 53.3
HPP92_005768 Vanilla planifolia HOM05D003920 ORTHO05D004877 1.3e-84 317.0 364 51.6
ATR0605G260 Amborella trichopoda HOM05D003920 ORTHO05D004877 1.7e-84 316.6 347 53.6
Migut.N01471 Erythranthe guttata HOM05D003920 ORTHO05D004877 3.8e-84 315.5 344 54.1
Nitab4.5_0000634g0100 Nicotiana tabacum HOM05D003920 ORTHO05D004877 3.8e-84 315.5 344 51.2
THA.LOC104827426 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 3.8e-84 315.5 348 55.2
CDE04G0006 Ceratophyllum demersum HOM05D003920 ORTHO05D004877 4.9e-84 315.1 349 51.6
BcaB04g21254 Brassica carinata HOM05D003920 ORTHO05D004877 6.5e-84 314.7 323 56.7
SalBow5G4770 Salvia bowleyana HOM05D003920 ORTHO05D004877 6.5e-84 314.7 335 52.8
Zm00001eb381600 Zea mays HOM05D003920 ORTHO05D004877 3.2e-83 312.4 368 50.5
Lj9C630T11 Lonicera japonica HOM05D003920 ORTHO05D004877 4.2e-83 312.0 181 77.9
THA.LOC104819067 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 7.1e-83 311.2 358 52.2
VMungo1080G0709 Vigna mungo HOM05D003920 ORTHO05D004877 1.2e-82 310.5 246 61.4
Nitab4.5_0011837g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 2.7e-82 309.3 371 49.6
SEGI_34678 Sequoiadendron giganteum HOM05D003920 ORTHO05D004877 3.5e-82 308.9 324 54.0
vmacro13655 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 3.9e-81 305.4 420 46.0
SGA_v2.0_scaffold167G38446 Striga asiatica HOM05D003920 ORTHO05D004877 5.1e-81 305.1 332 54.2
Sopen01g034110 Solanum pennellii HOM05D003920 ORTHO05D004877 3.3e-80 302.4 357 49.0
Solyc01g087030.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 5.7e-80 301.6 357 49.0
MBI04_g13623_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D004877 2.8e-79 299.3 351 51.6
Gohir.D08G166100 Gossypium hirsutum HOM05D003920 ORTHO05D004877 6.3e-79 298.1 243 60.1
SGA_v2.0_scaffold24G10678 Striga asiatica HOM05D003920 ORTHO05D004877 1.4e-78 297.0 289 54.3
TAR369G0176 Trochodendron aralioides HOM05D003920 ORTHO05D004877 6.9e-78 294.7 363 49.6
QL04p007133 Quercus lobata HOM05D003920 ORTHO05D004877 2.2e-76 289.7 327 53.2
Thecc.01G412100 Theobroma cacao HOM05D003920 ORTHO05D004877 2.9e-76 289.3 327 53.2
C08p21410 Brassica napus HOM05D003920 ORTHO05D004877 5.0e-76 288.5 212 66.5
AUR62009376 Chenopodium quinoa HOM05D003920 ORTHO05D004877 1.1e-75 287.3 335 50.7
Ciclev10031666m.g Citrus clementina HOM05D003920 ORTHO05D004877 1.9e-75 286.6 314 48.1
TAR633G1074 Trochodendron aralioides HOM05D003920 ORTHO05D004877 2.5e-75 286.2 180 72.2
EL10Ac2g04315 Beta vulgaris HOM05D003920 ORTHO05D004877 5.5e-75 285.0 335 51.0
Actinidia36714 Actinidia chinensis HOM05D003920 ORTHO05D004877 9.4e-75 284.3 253 56.1
FAN01G3017 Fragaria x ananassa HOM05D003920 ORTHO05D004877 9.4e-75 284.3 328 50.9
FAN03G2194 Fragaria x ananassa HOM05D003920 ORTHO05D004877 9.4e-75 284.3 328 50.9
Aa31LG5G18640 Aethionema arabicum HOM05D003920 ORTHO05D004877 1.8e-73 280.0 184 72.8
Atru.chr11.2647 Acer truncatum HOM05D003920 ORTHO05D004877 3.9e-73 278.9 319 52.0
RcHm_v2.0_Chr1g0315781 Rosa chinensis HOM05D003920 ORTHO05D004877 3.9e-73 278.9 328 50.3
Haze_03212 Corylus avellana HOM05D003920 ORTHO05D004877 6.7e-73 278.1 322 52.2
Actinidia31057 Actinidia chinensis HOM05D003920 ORTHO05D004877 2.0e-72 276.6 279 58.1
Cc02_g27790 Coffea canephora HOM05D003920 ORTHO05D004877 1.2e-69 267.3 329 48.9
Lsat_1_v5_gn_1_107981 Lactuca sativa HOM05D003920 ORTHO05D004877 1.5e-69 266.9 318 50.3
MELO3C023541.2 Cucumis melo HOM05D003920 ORTHO05D004877 1.1e-67 260.8 317 49.8
CsaV3_7G031170 Cucumis sativus L. HOM05D003920 ORTHO05D004877 1.4e-67 260.4 317 49.5
SMO203G0245 Selaginella moellendorffii HOM05D003920 ORTHO05D004877 1.6e-66 256.9 317 48.6
CSS0030964 Camellia sinensis var. sinensis HOM05D003920 ORTHO05D004877 2.7e-66 256.1 212 59.4
Pp3c5_25680 Physcomitrium patens HOM05D003920 ORTHO05D004877 2.7e-66 256.1 341 39.9
TWI53G1741 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 3.9e-65 252.3 147 77.6
Peaxi162Scf00148g00610 Petunia axillaris HOM05D003920 ORTHO05D004877 5.1e-65 251.9 264 50.8
Mapoly0042s0020 Marchantia polymorpha HOM05D003920 ORTHO05D004877 1.1e-64 250.8 175 61.1
Lj7A569G59 Lonicera japonica HOM05D003920 ORTHO05D004877 7.0e-62 241.5 216 55.1
PGR044G2672 Punica granatum HOM05D003920 ORTHO05D004877 1.2e-61 240.7 212 54.7
ClCG09G004250 Citrullus lanatus HOM05D003920 ORTHO05D004877 3.5e-61 239.2 142 75.4
Zm00001eb252860 Zea mays HOM05D003920 ORTHO05D004877 1.4e-59 233.8 325 40.0
Nitab4.5_0000254g0170 Nicotiana tabacum HOM05D003920 ORTHO05D004877 2.5e-59 233.0 207 55.6
arahy.Tifrunner.gnm1.ann1.3CZ6TN Arachis hypogaea HOM05D003920 ORTHO05D004877 1.4e-57 227.3 152 67.1
Manes.07G005000 Manihot esculenta HOM05D003920 ORTHO05D004877 2.3e-57 226.5 297 48.1
unitig_26.g8826 Utricularia gibba HOM05D003920 ORTHO05D004877 8.8e-57 224.6 234 52.1
Actinidia24671 Actinidia chinensis HOM05D003920 ORTHO05D004877 1.5e-56 223.8 245 49.4
arahy.Tifrunner.gnm1.ann1.NHZH5I Arachis hypogaea HOM05D003920 ORTHO05D004877 1.5e-56 223.8 149 67.1
Glyma.15G273000 Glycine max HOM05D003920 ORTHO05D004877 1.5e-56 223.8 154 63.6
Sabra04G0083700 Salix brachista HOM05D003920 ORTHO05D004877 4.4e-56 222.2 214 52.8
Potri.004G134400 Populus trichocarpa HOM05D003920 ORTHO05D004877 5.7e-56 221.9 284 48.6
Hund03665 Selenicereus undatus HOM05D003920 ORTHO05D004877 7.4e-56 221.5 295 48.5
TPR.G12281 Trifolium pratense HOM05D003920 ORTHO05D004877 1.4e-54 217.2 302 45.4
VMungo1080G1751 Vigna mungo HOM05D003920 ORTHO05D004877 1.8e-54 216.9 154 61.0
Glyma.08G154100 Glycine max HOM05D003920 ORTHO05D004877 3.1e-54 216.1 316 45.9
Medtr3g028170 Medicago truncatula HOM05D003920 ORTHO05D004877 4.1e-54 215.7 152 63.2
Ca_14370_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 5.3e-54 215.3 153 63.4
Psat5g204240 Pisum sativum HOM05D003920 ORTHO05D004877 5.3e-54 215.3 153 64.7
Lalb_Chr01g0015331 Lupinus albus HOM05D003920 ORTHO05D004877 7.0e-54 214.9 152 62.5
Lalb_Chr20g0108061 Lupinus albus HOM05D003920 ORTHO05D004877 2.0e-53 213.4 153 61.4
Lj3g0002246 Lotus japonicus HOM05D003920 ORTHO05D004877 2.6e-53 213.0 157 59.2
Phvul.005G020000 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 2.6e-53 213.0 155 60.6
AagrBONN_evm.TU.Sc2ySwM_344.3645 Anthoceros agrestis HOM05D003920 ORTHO05D004877 7.7e-53 211.5 315 42.2
Gohir.A08G145200 Gossypium hirsutum HOM05D003920 ORTHO05D004877 7.7e-53 211.5 286 49.0
Nitab4.5_0004786g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 2.2e-52 209.9 343 44.3
AUR62023057 Chenopodium quinoa HOM05D003920 ORTHO05D004877 7.2e-51 204.9 291 46.4
vmacro08182 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 1.7e-47 193.7 296 44.6
Nitab4.5_0001299g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 8.3e-47 191.4 238 47.9
Nitab4.5_0003190g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.1e-46 191.0 184 52.2
Cre06.g278136 Chlamydomonas reinhardtii HOM05D003920 ORTHO05D004877 1.8e-46 190.3 172 48.3
GSVIVG01032073001 Vitis vinifera HOM05D003920 ORTHO05D004877 1.6e-45 187.2 108 75.9
Oeu039134.1 Olea europaea HOM05D003920 ORTHO05D004877 3.8e-44 182.6 108 75.0
Phvul.011G110100 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 4.4e-40 169.1 93 77.4
arahy.Tifrunner.gnm1.ann1.HIY6S0 Arachis hypogaea HOM05D003920 ORTHO05D004877 1.7e-39 167.2 181 47.0
arahy.Tifrunner.gnm1.ann1.YQ2HRW Arachis hypogaea HOM05D003920 ORTHO05D004877 1.7e-39 167.2 181 46.4
PRCOL_00005356 Prasinoderma coloniale HOM05D003920 ORTHO05D004877 1.7e-36 157.1 263 33.5
TPR.G31394 Trifolium pratense HOM05D002628 ORTHO05D002785 7.3e-19 98.6 102 42.2
QL04p005704 Quercus lobata HOM05D003920 ORTHO05D004877 8.3e-15 85.1 81 65.4
BolC8t49779H Brassica oleracea HOM05D003920 ORTHO05D017698 5.4e-14 82.4 41 95.1
BraA08t34788Z Brassica rapa HOM05D003920 ORTHO05D017698 5.4e-14 82.4 41 95.1
BolC8t48153H Brassica oleracea HOM05D003920 ORTHO05D017698 1.6e-13 80.9 45 86.7
QL93p2025_0050 Quercus lobata HOM05D003920 ORTHO05D337666 6.0e-13 79.0 247 38.1
C08p21400 Brassica napus HOM05D003920 ORTHO05D017698 5.6e-11 72.4 51 74.5
QL04p032014 Quercus lobata HOM05D003920 ORTHO05D004877 1.2e-10 71.2 38 71.1
QL04p032319 Quercus lobata HOM05D003920 ORTHO05D004877 2.8e-10 70.1 48 58.3
Cc02_g27780 Coffea canephora HOM05D003920 ORTHO05D017698 3.1e-09 66.6 41 75.6
MBI17_g06171_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D017698 3.4e-08 63.2 43 69.8
QL05p013448 Quercus lobata HOM05D001342 ORTHO05D017698 5.4e-06 55.8 44 65.9


User provided reference genes

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