Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g26600 Schrenkiella parvula HOM05D005212 ORTHO05D006353 1.9e-176 622.5 324 100.0
Thhalv10001552m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 1.9e-160 569.3 324 90.7
CARHR139690 Cardamine hirsuta HOM05D005212 ORTHO05D006353 1.3e-153 546.6 324 85.2
Carub.0004s2707 Capsella rubella HOM05D005212 ORTHO05D006353 2.7e-151 538.9 324 85.8
AL4G43530 Arabidopsis lyrata HOM05D005212 ORTHO05D006353 1.0e-150 537.0 327 85.6
BcaC02g07097 Brassica carinata HOM05D005212 ORTHO05D006353 7.4e-149 530.8 327 86.2
BolC4t28609H Brassica oleracea HOM05D000073 ORTHO05D006353 2.8e-148 528.9 327 85.9
AT2G44510 Arabidopsis thaliana HOM05D005212 ORTHO05D006353 8.2e-148 527.3 326 84.0
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 3.8e-145 518.5 322 85.4
BraA04t18796Z Brassica rapa HOM05D000073 ORTHO05D000033 8.4e-145 517.3 332 84.3
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 1.6e-143 513.1 317 86.1
BcaB06g29383 Brassica carinata HOM05D005212 ORTHO05D006353 1.5e-133 479.9 327 80.4
THA.LOC104816387 Tarenaya hassleriana HOM05D005212 ORTHO05D006353 1.3e-129 466.8 324 74.7
Aa31LG1G21440 Aethionema arabicum HOM05D005212 ORTHO05D006353 8.2e-124 447.6 331 73.1
BcaC01g05169 Brassica carinata HOM05D005212 ORTHO05D006353 1.4e-110 403.7 293 78.2
BcaNung07052 Brassica carinata HOM05D005212 ORTHO05D006353 2.0e-101 373.2 327 68.5
Lalb_Chr07g0187701 Lupinus albus HOM05D005212 ORTHO05D006353 9.5e-96 354.4 327 59.0
Prupe.8G002300 Prunus persica HOM05D005212 ORTHO05D006353 1.0e-94 350.9 326 58.3
HanXRQChr08g0212231 Helianthus annuus HOM05D005212 ORTHO05D006353 1.2e-93 347.4 327 57.8
Atru.chr12.1198 Acer truncatum HOM05D005212 ORTHO05D006353 1.5e-93 347.1 336 56.2
Potri.001G461100 Populus trichocarpa HOM05D005212 ORTHO05D006353 2.0e-93 346.7 326 58.6
CiPaw.05G194300 Carya illinoinensis HOM05D005212 ORTHO05D006353 5.7e-93 345.1 327 58.4
Prupe.1G329700 Prunus persica HOM05D005212 ORTHO05D006353 7.5e-93 344.7 325 56.9
CSS0012951 Camellia sinensis var. sinensis HOM05D005212 ORTHO05D006353 9.8e-93 344.4 327 56.6
Solyc04g007850.3 Solanum lycopersicum HOM05D005212 ORTHO05D006353 1.3e-92 344.0 328 56.1
PGR102G0858 Punica granatum HOM05D005212 ORTHO05D006353 1.7e-92 343.6 326 57.4
Thecc.04G190200 Theobroma cacao HOM05D005212 ORTHO05D006353 1.7e-92 343.6 324 58.6
TPR.G5141 Trifolium pratense HOM05D005212 ORTHO05D006353 2.8e-92 342.8 324 57.7
TWI60G0083 Tripterygium wilfordii HOM05D005212 ORTHO05D006353 2.8e-92 342.8 324 57.4
Sopen04g002980 Solanum pennellii HOM05D005212 ORTHO05D006353 3.7e-92 342.4 328 56.1
Migut.E00446 Erythranthe guttata HOM05D005212 ORTHO05D006353 4.9e-92 342.0 320 57.8
Ciclev10017606m.g Citrus clementina HOM05D005212 ORTHO05D006353 6.3e-92 341.7 322 58.4
Nn3g18288 Nelumbo nucifera HOM05D005212 ORTHO05D006353 1.4e-91 340.5 329 59.3
Ciclev10028815m.g Citrus clementina HOM05D005212 ORTHO05D006353 2.4e-91 339.7 332 58.1
Duzib268G0887 Durio zibethinus HOM05D005212 ORTHO05D006353 3.2e-91 339.3 325 56.9
CAN.G458.6 Capsicum annuum HOM05D005212 ORTHO05D006353 4.1e-91 339.0 328 55.8
Gohir.D13G128200 Gossypium hirsutum HOM05D005212 ORTHO05D006353 7.0e-91 338.2 325 56.0
Gorai.013G143600 Gossypium raimondii HOM05D005212 ORTHO05D006353 7.0e-91 338.2 325 56.0
Medtr3g088850 Medicago truncatula HOM05D005212 ORTHO05D006353 1.2e-90 337.4 328 56.7
Gohir.D09G202000 Gossypium hirsutum HOM05D005212 ORTHO05D006353 3.5e-90 335.9 325 55.4
Eucgr.H01942 Eucalyptus grandis HOM05D005212 ORTHO05D006353 4.5e-90 335.5 339 54.9
Psat7g082520 Pisum sativum HOM05D005212 ORTHO05D006353 4.5e-90 335.5 330 56.7
Thhalv10014438m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 1.3e-89 334.0 258 70.2
BolC3t15307H Brassica oleracea HOM05D005212 ORTHO05D006353 1.7e-89 333.6 293 68.3
Gorai.006G225800 Gossypium raimondii HOM05D005212 ORTHO05D006353 1.7e-89 333.6 325 55.1
EL10Ac9g21945 Beta vulgaris HOM05D005212 ORTHO05D006353 2.9e-89 332.8 327 56.3
HanXRQChr12g0363921 Helianthus annuus HOM05D005212 ORTHO05D006353 3.9e-89 332.4 327 53.2
Medtr3g096970 Medicago truncatula HOM05D005212 ORTHO05D006353 5.0e-89 332.0 327 57.5
RcHm_v2.0_Chr4g0443611 Rosa chinensis HOM05D005212 ORTHO05D006353 6.6e-89 331.6 328 56.1
ECA233G1697 Erigeron canadensis HOM05D005212 ORTHO05D006353 1.5e-88 330.5 340 54.1
TPR.G18569 Trifolium pratense HOM05D005212 ORTHO05D006353 1.5e-88 330.5 328 56.4
GSVIVG01023834001 Vitis vinifera HOM05D005212 ORTHO05D006353 2.5e-88 329.7 327 56.3
Gohir.A13G124600 Gossypium hirsutum HOM05D005212 ORTHO05D006353 3.3e-88 329.3 325 54.8
Ca_24783_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 5.6e-88 328.6 327 56.3
Gohir.A09G208525 Gossypium hirsutum HOM05D005212 ORTHO05D006353 7.3e-88 328.2 328 54.6
Nitab4.5_0009115g0010 Nicotiana tabacum HOM05D005212 ORTHO05D006353 7.3e-88 328.2 329 54.7
Glyma.08G095400 Glycine max HOM05D005212 ORTHO05D006353 3.6e-87 325.9 326 55.2
Manes.17G080300 Manihot esculenta HOM05D005212 ORTHO05D006353 6.1e-87 325.1 323 54.8
MD16G1023100 Malus domestica HOM05D005212 ORTHO05D006353 8.0e-87 324.7 264 62.9
FvH4_4g34100 Fragaria vesca HOM05D005212 ORTHO05D006353 1.0e-86 324.3 327 55.4
Lj4g0012207 Lotus japonicus HOM05D005212 ORTHO05D006353 1.4e-86 323.9 334 55.1
Aqoxy7G01425 Aquilegia oxysepala HOM05D005212 ORTHO05D006353 2.3e-86 323.2 324 56.2
Peaxi162Scf00723g00423 Petunia axillaris HOM05D005212 ORTHO05D006353 2.3e-86 323.2 341 53.1
CANSAT01G1481 Cannabis sativa HOM05D005212 ORTHO05D006353 5.2e-86 322.0 325 55.4
PGSC0003DMG400029477 Solanum tuberosum HOM05D005212 ORTHO05D006353 8.9e-86 321.2 303 55.4
Duzib151G1103 Durio zibethinus HOM05D005212 ORTHO05D006353 2.0e-85 320.1 325 54.5
RcHm_v2.0_Chr3g0448371 Rosa chinensis HOM05D005212 ORTHO05D006353 2.6e-85 319.7 328 54.6
Hma1.2p1_0060F.1_g032750 Hydrangea macrophylla HOM05D005212 ORTHO05D006353 2.2e-84 316.6 325 53.2
Rhsim09G0094100 Rhododendron simsii HOM05D005212 ORTHO05D006353 2.2e-84 316.6 327 53.5
Lsat_1_v5_gn_4_8681 Lactuca sativa HOM05D005212 ORTHO05D006353 3.2e-83 312.8 244 63.5
Phvul.005G028500 Phaseolus vulgaris HOM05D005212 ORTHO05D006353 9.2e-83 311.2 328 54.9
Sed0020748 Sechium edule HOM05D005212 ORTHO05D006353 3.5e-82 309.3 324 51.9
C03p29590 Brassica napus HOM05D005212 ORTHO05D006353 7.8e-82 308.1 303 64.4
DCAR_014725 Daucus carota HOM05D005212 ORTHO05D006353 1.3e-81 307.4 326 53.7
Sabra16G0312600 Salix brachista HOM05D005212 ORTHO05D006353 2.3e-81 306.6 364 51.6
QL03p033836 Quercus lobata HOM05D005212 ORTHO05D006353 1.9e-80 303.5 293 56.3
Oeu014050.1 Olea europaea HOM05D005212 ORTHO05D006353 3.3e-80 302.8 331 52.3
Ah.11g044490 Amaranthus hybridus HOM05D005212 ORTHO05D006353 5.6e-80 302.0 334 51.5
BcaB01g03308 Brassica carinata HOM05D005212 ORTHO05D006353 1.2e-79 300.8 304 62.2
GSVIVG01011709001 Vitis vinifera HOM05D005212 ORTHO05D006353 1.2e-79 300.8 342 52.3
Haze_10945 Corylus avellana HOM05D005212 ORTHO05D006353 2.1e-79 300.1 326 52.8
SGA_v2.0_scaffold39G15210 Striga asiatica HOM05D005212 ORTHO05D006353 1.1e-78 297.7 329 51.4
CsaV3_5G028340 Cucumis sativus L. HOM05D005212 ORTHO05D006353 4.0e-78 295.8 325 50.2
Lj3C867T4 Lonicera japonica HOM05D005212 ORTHO05D006353 4.0e-78 295.8 307 54.1
AL6G13400 Arabidopsis lyrata HOM05D005212 ORTHO05D006353 6.8e-78 295.0 266 63.5
AT5G03830 Arabidopsis thaliana HOM05D005212 ORTHO05D006353 6.8e-78 295.0 287 61.0
PSO339G5759 Papaver somniferum HOM05D005212 ORTHO05D006353 1.7e-76 290.4 341 49.9
PSO478G2757 Papaver somniferum HOM05D005212 ORTHO05D006353 1.9e-75 287.0 341 49.0
Os03g0853900 Oryza sativa ssp. japonica HOM05D005212 ORTHO05D006353 4.1e-75 285.8 347 46.4
Ca_01441_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 5.4e-75 285.4 288 55.9
PSO017G4317 Papaver somniferum HOM05D005212 ORTHO05D006353 3.5e-74 282.7 341 48.1
Sc10g0005560 Simmondsia chinensis HOM05D005212 ORTHO05D006353 4.6e-74 282.3 295 51.9
AUR62008760 Chenopodium quinoa HOM05D005212 ORTHO05D006353 1.3e-73 280.8 326 48.8
Zm00001eb210590 Zea mays HOM05D005212 ORTHO05D006353 1.3e-73 280.8 368 45.4
FAN07G0183 Fragaria x ananassa HOM05D005212 ORTHO05D006353 3.9e-73 279.3 291 54.0
vmacro10659 Vaccinium macrocarpon HOM05D005212 ORTHO05D006353 9.5e-72 274.6 323 50.5
SalBow2G0696 Salvia bowleyana HOM05D005212 ORTHO05D006353 6.2e-71 271.9 295 52.2
ClCG01G006340 Citrullus lanatus HOM05D005212 ORTHO05D006353 8.1e-71 271.6 354 46.9
Sed0012238 Sechium edule HOM05D005212 ORTHO05D006353 1.4e-70 270.8 240 56.2
HPP92_020815 Vanilla planifolia HOM05D005212 ORTHO05D006353 1.5e-69 267.3 327 46.8
ATR0829G227 Amborella trichopoda HOM05D005212 ORTHO05D006353 3.4e-69 266.2 250 54.8
MSTRG.13603 Avicennia marina HOM05D005212 ORTHO05D006353 3.4e-69 266.2 217 63.6
FAN22G0397 Fragaria x ananassa HOM05D005212 ORTHO05D006353 3.4e-69 266.2 235 58.7
Manes.15G130900 Manihot esculenta HOM05D005212 ORTHO05D006353 3.4e-69 266.2 301 52.5
FAN12G1848 Fragaria x ananassa HOM05D005212 ORTHO05D006353 6.4e-68 261.9 294 51.7
FAN17G0532 Fragaria x ananassa HOM05D005212 ORTHO05D006353 6.4e-68 261.9 248 57.3
PSO384G3589 Papaver somniferum HOM05D005212 ORTHO05D006353 5.4e-67 258.8 356 44.4
Dinv36246 Davidia involucrata HOM05D005212 ORTHO05D006353 3.5e-66 256.1 315 48.3
Oeu063592.1 Olea europaea HOM05D005212 ORTHO05D006353 3.5e-66 256.1 292 50.7
VMungo1080G0912 Vigna mungo HOM05D005212 ORTHO05D006353 4.3e-64 249.2 306 49.3
Dinv28041 Davidia involucrata HOM05D005212 ORTHO05D006353 5.6e-64 248.8 250 56.8
MELO3C005296.2 Cucumis melo HOM05D005212 ORTHO05D006353 2.1e-63 246.9 324 44.1
Mapoly0006s0099 Marchantia polymorpha HOM05D005212 ORTHO05D006353 4.7e-63 245.7 266 47.7
AUR62025478 Chenopodium quinoa HOM05D005212 ORTHO05D006353 2.4e-62 243.4 216 57.9
SMO334G0102 Selaginella moellendorffii HOM05D005212 ORTHO05D006353 8.4e-60 235.0 244 50.0
Thhalv10015472m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 3.2e-59 233.0 150 78.7
Pp3c25_10280 Physcomitrium patens HOM05D005212 ORTHO05D006353 6.6e-57 225.3 287 45.3
AagrBONN_evm.TU.Sc2ySwM_344.3756 Anthoceros agrestis HOM05D005212 ORTHO05D006353 1.5e-56 224.2 275 46.2
Hund05206 Selenicereus undatus HOM05D005212 ORTHO05D006353 4.3e-56 222.6 274 49.3
AUR62014219 Chenopodium quinoa HOM05D005212 ORTHO05D006353 1.4e-54 217.6 276 46.0
Cc04_g08850 Coffea canephora HOM05D005212 ORTHO05D006353 1.5e-53 214.2 173 63.6
Ca_09937_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 2.7e-50 203.4 252 46.8
Ca_09949_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 2.7e-50 203.4 252 46.8
AUR62014218 Chenopodium quinoa HOM05D005212 ORTHO05D006353 8.7e-49 198.4 246 46.7
CDE04G0882 Ceratophyllum demersum HOM05D005212 ORTHO05D006353 1.3e-44 184.5 153 60.8
Cpa.g.sc1084.4 Carica papaya HOM05D005212 ORTHO05D006353 1.1e-43 181.4 122 69.7
CiPaw.06G048200 Carya illinoinensis HOM05D005212 ORTHO05D006353 2.3e-41 173.7 324 39.5
AUR62018080 Chenopodium quinoa HOM05D005212 ORTHO05D006353 2.5e-40 170.2 304 37.2
Hund24107 Selenicereus undatus HOM05D005212 ORTHO05D006353 7.4e-40 168.7 130 64.6
COL.COLO4_35970 Corchorus olitorius HOM05D005212 ORTHO05D006353 1.8e-38 164.1 178 50.0
MCO05G230 Micromonas commoda HOM05D005212 ORTHO05D006353 1.2e-37 161.4 248 39.1
unitig_22.g5595 Utricularia gibba HOM05D005212 ORTHO05D006353 3.4e-37 159.8 183 50.3
CBR_g30204 Chara braunii HOM05D000019 ORTHO05D000353 1.8e-30 137.5 143 49.0
Cc04_g08860 Coffea canephora HOM05D005212 ORTHO05D006353 2.2e-28 130.6 158 48.1
SEGI_04595 Sequoiadendron giganteum HOM05D005212 ORTHO05D006353 2.2e-28 130.6 158 44.9
AUR62014216 Chenopodium quinoa HOM05D005212 ORTHO05D006353 5.5e-27 125.9 197 39.6
Cre03.g200991 Chlamydomonas reinhardtii HOM05D005212 ORTHO05D006353 2.7e-26 123.6 284 30.3
Sabra11G0142300 Salix brachista HOM05D005212 ORTHO05D006353 1.1e-19 101.7 159 44.0
unitig_22.g5596 Utricularia gibba HOM05D005212 ORTHO05D006353 2.5e-19 100.5 73 67.1
Cfa023609 Carpinus fangiana HOM05D005212 ORTHO05D006353 1.4e-14 84.7 170 31.2
Aqoxy6G02632 Aquilegia oxysepala HOM05D005212 ORTHO05D006353 3.4e-13 80.1 57 70.2
Peaxi162Scf00376g00010 Petunia axillaris HOM05D005212 ORTHO05D006353 5.1e-09 66.2 178 33.1
ATR0594G067 Amborella trichopoda HOM05D005212 ORTHO05D006353 9.7e-08 62.0 98 35.7
CARHR209430 Cardamine hirsuta HOM05D005212 ORTHO05D006353 6.3e-07 59.3 41 70.7
PRCOL_00004527 Prasinoderma coloniale HOM05D005212 ORTHO05D006353 4.1e-06 56.6 244 25.0


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