Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g26350 Schrenkiella parvula HOM05D004544 ORTHO05D005504 6.6e-260 900.2 462 100.0
BcaB02g08807 Brassica carinata HOM05D004544 ORTHO05D005504 1.1e-249 866.3 462 95.2
A05p04480 Brassica napus HOM05D004544 ORTHO05D005504 2.4e-249 865.1 462 94.8
BcaNung06603 Brassica carinata HOM05D004544 ORTHO05D005504 3.1e-249 864.8 462 94.8
BolC4t22159H Brassica oleracea HOM05D004544 ORTHO05D005504 3.1e-249 864.8 462 94.8
BraA05t19424Z Brassica rapa HOM05D004544 ORTHO05D005504 5.2e-249 864.0 462 94.8
C04p05190 Brassica napus HOM05D004544 ORTHO05D005504 5.8e-248 860.5 462 94.8
Thhalv10001436m.g Eutrema salsugineum HOM05D004544 ORTHO05D005504 1.3e-247 859.4 462 94.4
CARHR139460 Cardamine hirsuta HOM05D004544 ORTHO05D005504 1.7e-244 849.0 463 93.7
AT2G44280 Arabidopsis thaliana HOM05D004544 ORTHO05D005504 2.8e-242 841.6 464 92.2
AL4G43240 Arabidopsis lyrata HOM05D004544 ORTHO05D005504 8.1e-242 840.1 463 92.2
BolC4t28598H Brassica oleracea HOM05D004544 ORTHO05D005504 2.9e-239 831.6 462 90.3
Carub.0004s2687 Capsella rubella HOM05D004544 ORTHO05D005504 2.9e-239 831.6 463 91.6
A04p33250 Brassica napus HOM05D004544 ORTHO05D005504 4.2e-238 827.8 462 90.3
BraA04t18786Z Brassica rapa HOM05D004544 ORTHO05D005504 4.2e-238 827.8 462 90.3
C04p70950 Brassica napus HOM05D004544 ORTHO05D005504 7.3e-235 817.0 489 85.3
Aa31LG1G25900 Aethionema arabicum HOM05D004544 ORTHO05D005504 2.7e-229 798.5 481 85.0
BcaB06g29367 Brassica carinata HOM05D004544 ORTHO05D005504 3.3e-227 791.6 483 84.3
Thhalv10005961m.g Eutrema salsugineum HOM05D004544 ORTHO05D005504 2.2e-223 778.9 457 86.2
Carub.0005s2680 Capsella rubella HOM05D004544 ORTHO05D005504 9.3e-222 773.5 457 86.0
AT3G60070 Arabidopsis thaliana HOM05D004544 ORTHO05D005504 1.0e-220 770.0 460 85.4
AL5G42260 Arabidopsis lyrata HOM05D004544 ORTHO05D005504 6.7e-220 767.3 461 84.6
BolC4t24833H Brassica oleracea HOM05D004544 ORTHO05D005504 6.9e-217 757.3 461 83.1
C04p32650 Brassica napus HOM05D004544 ORTHO05D005504 5.8e-216 754.2 461 83.3
A04p01890 Brassica napus HOM05D004544 ORTHO05D005504 1.7e-215 752.7 458 83.6
BcaC02g10108 Brassica carinata HOM05D004544 ORTHO05D005504 3.8e-215 751.5 461 83.1
Sp5g03140 Schrenkiella parvula HOM05D004544 ORTHO05D005504 5.0e-215 751.1 455 83.5
BraA04t15912Z Brassica rapa HOM05D004544 ORTHO05D005504 2.5e-214 748.8 461 83.5
BcaB02g08195 Brassica carinata HOM05D004544 ORTHO05D005504 3.5e-213 745.0 461 82.4
Aa31LG10G14230 Aethionema arabicum HOM05D004544 ORTHO05D005504 1.1e-211 740.0 461 81.3
THA.LOC104817137 Tarenaya hassleriana HOM05D004544 ORTHO05D005504 2.4e-209 732.3 461 80.5
Atru.chr12.1432 Acer truncatum HOM05D004544 ORTHO05D005504 3.0e-188 662.1 453 72.4
Thecc.08G193200 Theobroma cacao HOM05D004544 ORTHO05D005504 4.0e-188 661.8 449 73.7
Duzib068G1099 Durio zibethinus HOM05D004544 ORTHO05D005504 1.5e-187 659.8 449 73.5
CiPaw.13G000600 Carya illinoinensis HOM05D004544 ORTHO05D005504 2.0e-184 649.4 449 70.2
Ciclev10031412m.g Citrus clementina HOM05D004544 ORTHO05D005504 3.8e-183 645.2 475 67.4
CANSAT11G0055 Cannabis sativa HOM05D004544 ORTHO05D005504 3.2e-182 642.1 453 70.0
Gohir.D08G037000 Gossypium hirsutum HOM05D004544 ORTHO05D005504 5.5e-182 641.3 449 71.3
Gorai.004G035000 Gossypium raimondii HOM05D004544 ORTHO05D005504 7.2e-182 641.0 449 71.3
RcHm_v2.0_Chr1g0313141 Rosa chinensis HOM05D004544 ORTHO05D005504 7.2e-182 641.0 455 69.7
Potri.009G024600 Populus trichocarpa HOM05D004544 ORTHO05D005504 2.1e-181 639.4 449 69.5
Cfa010700 Carpinus fangiana HOM05D004544 ORTHO05D005504 8.0e-181 637.5 449 70.8
TWI09G1596 Tripterygium wilfordii HOM05D004544 ORTHO05D005504 4.0e-180 635.2 449 69.7
FvH4_c5g00010 Fragaria vesca HOM05D004544 ORTHO05D005504 5.2e-180 634.8 455 68.8
Potri.001G232100 Populus trichocarpa HOM05D004544 ORTHO05D005504 6.8e-180 634.4 454 69.2
Eucgr.E04336 Eucalyptus grandis HOM05D004544 ORTHO05D005504 1.2e-179 633.6 449 69.0
FAN01G0284 Fragaria x ananassa HOM05D004544 ORTHO05D005504 4.4e-179 631.7 455 68.4
GSVIVG01001349001 Vitis vinifera HOM05D004544 ORTHO05D005504 7.5e-179 630.9 455 67.9
Cpa.g.c29747 Carica papaya HOM05D004544 ORTHO05D005504 2.2e-178 629.4 391 79.5
MD02G1320400 Malus domestica HOM05D004544 ORTHO05D005504 3.7e-178 628.6 450 69.8
PGR031G1320 Punica granatum HOM05D004544 ORTHO05D005504 4.1e-177 625.2 454 67.2
Lalb_Chr25g0283741 Lupinus albus HOM05D004544 ORTHO05D005504 9.1e-177 624.0 449 70.8
CSS0044763 Camellia sinensis var. sinensis HOM05D004544 ORTHO05D005504 2.7e-176 622.5 455 67.5
Lj3g0003623 Lotus japonicus HOM05D004544 ORTHO05D005504 1.3e-175 620.2 450 70.2
Medtr2g062270 Medicago truncatula HOM05D004544 ORTHO05D005504 1.7e-175 619.8 435 72.2
Glyma.15G267700 Glycine max HOM05D004544 ORTHO05D005504 2.2e-175 619.4 448 70.1
Oeu060709.1 Olea europaea HOM05D004544 ORTHO05D005504 2.9e-175 619.0 453 68.4
Glyma.08G158600 Glycine max HOM05D004544 ORTHO05D005504 5.0e-175 618.2 448 70.3
Rhsim07G0049300 Rhododendron simsii HOM05D004544 ORTHO05D005504 8.5e-175 617.5 449 68.8
Actinidia05839 Actinidia chinensis HOM05D004544 ORTHO05D005504 1.1e-174 617.1 449 68.6
Nn7g35919 Nelumbo nucifera HOM05D004544 ORTHO05D005504 1.1e-174 617.1 455 68.1
Ca_03221_v3 Cicer arietinum L. HOM05D004544 ORTHO05D005504 2.5e-174 615.9 449 68.2
TAR633G2617 Trochodendron aralioides HOM05D004544 ORTHO05D005504 2.5e-174 615.9 450 67.8
Dinv43503 Davidia involucrata HOM05D004544 ORTHO05D005504 7.2e-174 614.4 449 67.9
arahy.Tifrunner.gnm1.ann1.HLF3VC Arachis hypogaea HOM05D004544 ORTHO05D005504 9.4e-174 614.0 489 65.8
arahy.Tifrunner.gnm1.ann1.ZSC88Q Arachis hypogaea HOM05D004544 ORTHO05D005504 1.2e-173 613.6 489 65.6
Solyc01g073660.3 Solanum lycopersicum HOM05D004544 ORTHO05D005504 2.7e-173 612.5 450 66.2
Sopen01g033220 Solanum pennellii HOM05D004544 ORTHO05D005504 2.7e-173 612.5 450 66.2
Cc02_g26820 Coffea canephora HOM05D004544 ORTHO05D005504 3.6e-173 612.1 455 67.0
PSO170G0355 Papaver somniferum HOM05D004544 ORTHO05D005504 3.6e-173 612.1 456 68.4
VMungo1080G0174 Vigna mungo HOM05D004544 ORTHO05D005504 3.6e-173 612.1 449 69.0
vmacro22467 Vaccinium macrocarpon HOM05D004544 ORTHO05D005504 8.0e-173 610.9 466 67.0
Phvul.005G042600 Phaseolus vulgaris HOM05D004544 ORTHO05D005504 1.0e-172 610.5 449 68.8
Nn2g15791 Nelumbo nucifera HOM05D004544 ORTHO05D005504 1.4e-172 610.1 455 67.5
EL10Ac1g02232 Beta vulgaris HOM05D004544 ORTHO05D005504 2.3e-172 609.4 449 66.4
EL10Ac1g02233 Beta vulgaris HOM05D004544 ORTHO05D005504 2.3e-172 609.4 449 66.4
CAN.G1361.5 Capsicum annuum HOM05D004544 ORTHO05D005504 5.2e-172 608.2 457 65.0
PSO063G0048 Papaver somniferum HOM05D004544 ORTHO05D005504 5.2e-172 608.2 457 68.1
Aqoxy1G00422 Aquilegia oxysepala HOM05D004544 ORTHO05D005504 2.0e-171 606.3 449 66.8
TPR.G16160 Trifolium pratense HOM05D004544 ORTHO05D005504 7.5e-171 604.4 435 70.1
AUR62035404 Chenopodium quinoa HOM05D004544 ORTHO05D005504 9.8e-171 604.0 449 65.7
CsaV3_7G031530 Cucumis sativus L. HOM05D004544 ORTHO05D005504 1.7e-170 603.2 461 64.6
Gohir.A08G026600 Gossypium hirsutum HOM05D004544 ORTHO05D005504 1.1e-169 600.5 449 67.7
MBI01_g14445_MAGBIO Magnolia biondii HOM05D004544 ORTHO05D005504 2.4e-169 599.4 457 66.1
DCAR_024995 Daucus carota HOM05D004544 ORTHO05D005504 4.1e-169 598.6 459 66.9
Psat1g129360 Pisum sativum HOM05D004544 ORTHO05D005504 2.7e-168 595.9 435 70.6
Manes.10G153000 Manihot esculenta HOM05D004544 ORTHO05D005504 5.0e-167 591.7 402 73.6
ClCG09G003650 Citrullus lanatus HOM05D004544 ORTHO05D005504 1.1e-166 590.5 489 61.3
Sed0009480 Sechium edule HOM05D004544 ORTHO05D005504 1.5e-166 590.1 446 64.8
SGA_v2.0_scaffold260G45890 Striga asiatica HOM05D004544 ORTHO05D005504 2.5e-166 589.3 478 62.3
Sc03g0003850 Simmondsia chinensis HOM05D004544 ORTHO05D005504 1.6e-165 586.6 450 65.3
Hma1.2p1_0128F.1_g059850 Hydrangea macrophylla HOM05D004544 ORTHO05D005504 1.2e-163 580.5 428 67.1
Nn2g15790 Nelumbo nucifera HOM05D004544 ORTHO05D005504 1.5e-163 580.1 444 66.0
HanXRQChr04g0117441 Helianthus annuus HOM05D004544 ORTHO05D005504 2.0e-163 579.7 441 65.1
ECA236G1315 Erigeron canadensis HOM05D004544 ORTHO05D005504 1.4e-161 573.5 441 64.2
PGSC0003DMG400031131 Solanum tuberosum HOM05D004544 ORTHO05D005504 1.4e-161 573.5 459 62.5
CDE04G3336 Ceratophyllum demersum HOM05D004544 ORTHO05D005504 1.8e-161 573.2 443 65.7
SalBow5G3691 Salvia bowleyana HOM05D004544 ORTHO05D005504 2.4e-161 572.8 470 61.5
Os07g0578200 Oryza sativa ssp. japonica HOM05D004544 ORTHO05D005504 2.0e-160 569.7 455 61.3
TAR633G0112 Trochodendron aralioides HOM05D004544 ORTHO05D005504 1.3e-159 567.0 418 68.2
unitig_749.g13487 Utricularia gibba HOM05D004544 ORTHO05D005504 3.0e-159 565.8 461 60.5
HPP92_012523 Vanilla planifolia HOM05D004544 ORTHO05D005504 5.0e-159 565.1 444 63.3
AUR62041888 Chenopodium quinoa HOM05D004544 ORTHO05D005504 9.5e-158 560.8 549 53.6
Peaxi162Scf00402g00941 Petunia axillaris HOM05D004544 ORTHO05D005504 2.8e-157 559.3 449 62.6
Zm00001eb325500 Zea mays HOM05D004544 ORTHO05D005504 2.0e-155 553.1 466 60.1
Lsat_1_v5_gn_7_33840 Lactuca sativa HOM05D004544 ORTHO05D005504 1.1e-153 547.4 391 68.0
Haze_03276 Corylus avellana HOM05D004544 ORTHO05D005504 3.2e-153 545.8 396 68.7
ATR0001G054 Amborella trichopoda HOM05D004544 ORTHO05D005504 4.3e-150 535.4 399 67.4
CDE05G1716 Ceratophyllum demersum HOM05D004544 ORTHO05D005504 1.1e-148 530.8 481 57.6
Os03g0168000 Oryza sativa ssp. japonica HOM05D004544 ORTHO05D005504 1.2e-144 517.3 432 59.0
Nitab4.5_0000468g0180 Nicotiana tabacum HOM05D004544 ORTHO05D005504 8.9e-140 501.1 410 61.7
Zm00001eb402450 Zea mays HOM05D004544 ORTHO05D005504 1.2e-139 500.7 446 57.2
Peaxi162Scf00245g00710 Petunia axillaris HOM05D004544 ORTHO05D005504 3.4e-139 499.2 449 56.1
Mapoly0020s0019 Marchantia polymorpha HOM05D004544 ORTHO05D005504 4.6e-136 488.8 449 56.6
Nitab4.5_0004502g0040 Nicotiana tabacum HOM05D004544 ORTHO05D005504 3.0e-135 486.1 389 62.5
CAN.G928.1 Capsicum annuum HOM05D004544 ORTHO05D005504 5.1e-135 485.3 447 55.3
Sopen10g026790 Solanum pennellii HOM05D004544 ORTHO05D005504 1.8e-132 476.9 447 54.1
FAN01G3148 Fragaria x ananassa HOM05D004544 ORTHO05D005504 3.4e-131 472.6 354 66.9
Pp3c17_11410 Physcomitrium patens HOM05D004544 ORTHO05D005504 4.4e-131 472.2 453 52.1
AagrBONN_evm.TU.Sc2ySwM_368.1671 Anthoceros agrestis HOM05D004544 ORTHO05D005504 8.7e-127 458.0 434 52.1
CARHR170380 Cardamine hirsuta HOM05D004544 ORTHO05D005504 2.1e-125 453.4 291 80.4
SMO353G0186 Selaginella moellendorffii HOM05D004544 ORTHO05D005504 4.5e-123 445.7 387 57.6
Atru.chr11.2714 Acer truncatum HOM05D004544 ORTHO05D005504 2.2e-122 443.4 462 53.2
CAN.G1361.4 Capsicum annuum HOM05D004544 ORTHO05D005504 1.4e-121 440.7 463 50.1
Sopen01g033230 Solanum pennellii HOM05D004544 ORTHO05D005504 2.4e-121 439.9 458 48.9
Solyc01g073670.3 Solanum lycopersicum HOM05D004544 ORTHO05D005504 1.6e-120 437.2 458 48.5
FAN01G0042 Fragaria x ananassa HOM05D004544 ORTHO05D005504 2.1e-120 436.8 446 56.1
QL04p001964 Quercus lobata HOM05D004544 ORTHO05D005504 2.3e-119 433.3 280 74.3
Peaxi162Scf00402g00940 Petunia axillaris HOM05D004544 ORTHO05D005504 8.4e-114 414.8 453 47.5
Prupe.2G001700 Prunus persica HOM05D004544 ORTHO05D005504 2.3e-111 406.8 318 64.8
PGSC0003DMG400007701 Solanum tuberosum HOM05D004544 ORTHO05D005504 2.1e-101 373.6 447 45.9
SEGI_30614 Sequoiadendron giganteum HOM05D004544 ORTHO05D005504 5.5e-97 359.0 255 69.0
PGSC0003DMG400023279 Solanum tuberosum HOM05D004544 ORTHO05D005504 2.5e-94 350.1 391 49.9
FAN06G4582 Fragaria x ananassa HOM05D004544 ORTHO05D005504 5.0e-90 335.9 269 62.8
PGSC0003DMG400028978 Solanum tuberosum HOM05D004544 ORTHO05D005504 2.9e-82 310.1 457 39.8
Sabra09G0016300 Salix brachista HOM05D004544 ORTHO05D005504 1.0e-74 285.0 312 51.6
Zm00001eb107640 Zea mays HOM05D004544 ORTHO05D005504 3.6e-72 276.6 188 70.7
MELO3C023501.2 Cucumis melo HOM05D004544 ORTHO05D005504 8.2e-69 265.4 446 38.6
Migut.B01408 Erythranthe guttata HOM05D004544 ORTHO05D005504 3.0e-55 220.3 158 67.7
QL04p001975 Quercus lobata HOM05D004544 ORTHO05D005504 5.2e-55 219.5 174 63.8
Migut.B01407 Erythranthe guttata HOM05D004544 ORTHO05D005504 4.4e-54 216.5 129 79.1
Actinidia31716 Actinidia chinensis HOM05D004544 ORTHO05D005504 7.3e-49 199.1 155 63.2
SEGI_18579 Sequoiadendron giganteum HOM05D004544 ORTHO05D005504 6.8e-47 192.6 195 51.3
MELO3C000237.2 Cucumis melo HOM05D004544 ORTHO05D005504 8.9e-39 165.6 121 65.3
Psat2g024040 Pisum sativum HOM05D004544 ORTHO05D005504 3.4e-38 163.7 125 63.2
Migut.B01409 Erythranthe guttata HOM05D004544 ORTHO05D005504 2.1e-32 144.4 131 58.0
Solyc01g089990.3 Solanum lycopersicum HOM05D004544 ORTHO05D005504 6.8e-31 139.4 94 71.3
Actinidia31717 Actinidia chinensis HOM05D004544 ORTHO05D005504 1.2e-27 128.6 117 59.8
Lj7A562T25 Lonicera japonica HOM05D004544 ORTHO05D005504 8.6e-26 122.5 112 52.7
Hund18992 Selenicereus undatus HOM05D004544 ORTHO05D005504 3.6e-24 117.1 77 70.1
Os06g0628032 Oryza sativa ssp. japonica HOM05D004544 ORTHO05D005504 3.8e-21 107.1 101 48.5
QL04p001512 Quercus lobata HOM05D004544 ORTHO05D001929 5.4e-20 103.2 72 65.3
Glyma.20G091501 Glycine max HOM05D004544 ORTHO05D005504 4.7e-16 90.1 59 76.3
QL04p001505 Quercus lobata HOM05D004544 ORTHO05D005504 2.9e-13 80.9 43 81.4
Haze_14723 Corylus avellana HOM05D004544 ORTHO05D005504 1.9e-12 78.2 56 67.9
CAN.G913.7 Capsicum annuum HOM05D004544 ORTHO05D005504 2.7e-11 74.3 63 58.7
Nitab4.5_0006570g0020 Nicotiana tabacum HOM05D004544 ORTHO05D005504 2.8e-08 64.3 43 67.4
FvH4_5g06577 Fragaria vesca HOM05D000025 ORTHO05D000040 7.6e-06 56.2 37 75.7


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