Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g25650 Schrenkiella parvula HOM05D007459 ORTHO05D009234 8.4e-83 310.5 174 100.0
Thhalv10001662m.g Eutrema salsugineum HOM05D007459 ORTHO05D009234 2.1e-73 279.3 174 85.6
Carub.0004s2600 Capsella rubella HOM05D007459 ORTHO05D009234 7.9e-73 277.3 174 86.2
AL4G42340 Arabidopsis lyrata HOM05D007459 ORTHO05D009234 1.1e-71 273.5 174 85.6
A04p32820 Brassica napus HOM05D007459 ORTHO05D009234 2.8e-70 268.9 174 83.9
BraA04t18744Z Brassica rapa HOM05D007459 ORTHO05D009234 2.8e-70 268.9 174 83.9
AT2G43540 Arabidopsis thaliana HOM05D007459 ORTHO05D009234 8.2e-70 267.3 174 82.8
C04p70510 Brassica napus HOM05D007459 ORTHO05D009234 2.4e-69 265.8 174 83.9
BcaC02g07169 Brassica carinata HOM05D007459 ORTHO05D009234 1.5e-68 263.1 174 82.8
BcaC02g07170 Brassica carinata HOM05D007459 ORTHO05D009234 1.5e-68 263.1 174 82.8
BolC4t28553H Brassica oleracea HOM05D007459 ORTHO05D009234 1.5e-68 263.1 174 82.8
BcaB06g29324 Brassica carinata HOM05D007459 ORTHO05D009234 2.6e-68 262.3 174 82.8
CARHR138660 Cardamine hirsuta HOM05D007459 ORTHO05D009234 3.8e-67 258.5 174 80.5
BolC4t28554H Brassica oleracea HOM05D007459 ORTHO05D009234 1.3e-64 250.0 164 82.9
C04p70520 Brassica napus HOM05D007459 ORTHO05D009234 3.0e-64 248.8 164 82.3
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 8.2e-62 240.7 171 74.3
THA.LOC104805901 Tarenaya hassleriana HOM05D007459 ORTHO05D009234 5.9e-60 234.6 174 73.6
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 1.4e-56 223.4 149 81.9
QL10p052586 Quercus lobata HOM05D007459 ORTHO05D009234 2.5e-50 202.6 173 63.6
Cfa015229 Carpinus fangiana HOM05D007459 ORTHO05D009234 3.2e-50 202.2 173 62.4
Haze_01404 Corylus avellana HOM05D007459 ORTHO05D009234 7.2e-50 201.1 173 62.4
CiPaw.01G173000 Carya illinoinensis HOM05D007459 ORTHO05D009234 1.6e-49 199.9 171 62.0
Haze_01410 Corylus avellana HOM05D007459 ORTHO05D009234 3.0e-48 195.7 173 61.3
Manes.04G050800 Manihot esculenta HOM05D007459 ORTHO05D009234 3.3e-47 192.2 173 61.8
MD04G1047100 Malus domestica HOM05D007459 ORTHO05D009234 5.7e-47 191.4 173 60.1
PGR142G0909 Punica granatum HOM05D007459 ORTHO05D009234 5.7e-47 191.4 175 57.7
Duzib151G0483 Durio zibethinus HOM05D007459 ORTHO05D009234 3.7e-46 188.7 175 58.9
Prupe.1G201700 Prunus persica HOM05D007459 ORTHO05D009234 1.1e-45 187.2 173 57.8
Sabra07G0109100 Salix brachista HOM05D007459 ORTHO05D009234 2.4e-45 186.0 174 55.7
Thecc.04G171000 Theobroma cacao HOM05D007459 ORTHO05D009234 5.3e-45 184.9 175 57.1
Ciclev10022478m.g Citrus clementina HOM05D007459 ORTHO05D009234 1.6e-44 183.3 182 57.7
Lj6A129T18 Lonicera japonica HOM05D007459 ORTHO05D009234 2.6e-44 182.6 174 55.7
Potri.007G134400 Populus trichocarpa HOM05D007459 ORTHO05D009234 2.6e-44 182.6 174 55.2
Hma1.2p1_2359F.1_g320593 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 1.0e-43 180.6 174 54.6
RcHm_v2.0_Chr2g0138101 Rosa chinensis HOM05D007459 ORTHO05D009234 2.9e-43 179.1 173 54.9
CANSAT56G1213 Cannabis sativa HOM05D007459 ORTHO05D009234 5.0e-43 178.3 172 55.8
Hma1.2p1_0554F.1_g177940 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 5.0e-43 178.3 174 53.4
Cc03_g12180 Coffea canephora HOM05D007459 ORTHO05D009234 6.5e-43 177.9 175 52.6
Dinv44169 Davidia involucrata HOM05D007459 ORTHO05D009234 1.1e-42 177.2 172 55.2
Gohir.A02G092500 Gossypium hirsutum HOM05D007459 ORTHO05D009234 1.1e-42 177.2 175 56.6
Nn1g09730 Nelumbo nucifera HOM05D007459 ORTHO05D009234 1.1e-42 177.2 173 52.0
Gohir.D02G110600 Gossypium hirsutum HOM05D007459 ORTHO05D009234 3.2e-42 175.6 175 56.0
Gorai.005G125500 Gossypium raimondii HOM05D007459 ORTHO05D009234 3.2e-42 175.6 175 56.0
Atru.chr4.1350 Acer truncatum HOM05D007459 ORTHO05D009234 5.5e-42 174.9 176 54.0
TWI38G0757 Tripterygium wilfordii HOM05D007459 ORTHO05D009234 7.2e-42 174.5 161 58.4
CSS0017730 Camellia sinensis var. sinensis HOM05D007459 ORTHO05D009234 1.2e-41 173.7 174 52.3
MELO3C017778.2 Cucumis melo HOM05D007459 ORTHO05D009234 4.7e-41 171.8 173 54.3
TAR362G1157 Trochodendron aralioides HOM05D007459 ORTHO05D009234 4.7e-41 171.8 172 52.9
COL.COLO4_28394 Corchorus olitorius HOM05D007459 ORTHO05D009234 4.0e-40 168.7 175 54.3
Lalb_Chr22g0352011 Lupinus albus HOM05D007459 ORTHO05D009234 4.0e-40 168.7 172 52.3
Solyc06g073170.1 Solanum lycopersicum HOM05D007459 ORTHO05D009234 8.8e-40 167.5 172 53.5
FAN05G5726 Fragaria x ananassa HOM05D007459 ORTHO05D009234 1.2e-39 167.2 172 54.1
Sopen06g029540 Solanum pennellii HOM05D007459 ORTHO05D009234 1.2e-39 167.2 172 53.5
SGA_v2.0_scaffold25G10994 Striga asiatica HOM05D007459 ORTHO05D009234 1.2e-39 167.2 175 54.3
Haze_01399 Corylus avellana HOM05D007459 ORTHO05D009234 1.5e-39 166.8 158 57.0
FvH4_6g31340 Fragaria vesca HOM05D007459 ORTHO05D009234 2.0e-39 166.4 172 53.5
FAN14G2685 Fragaria x ananassa HOM05D007459 ORTHO05D009234 2.0e-39 166.4 172 53.5
Sed0000488 Sechium edule HOM05D007459 ORTHO05D009234 2.0e-39 166.4 173 52.6
PGSC0003DMG400027018 Solanum tuberosum HOM05D007459 ORTHO05D009234 7.5e-39 164.5 172 52.3
Sc06g0007410 Simmondsia chinensis HOM05D007459 ORTHO05D009234 9.7e-39 164.1 172 52.3
Nitab4.5_0013525g0010 Nicotiana tabacum HOM05D007459 ORTHO05D009234 4.8e-38 161.8 172 51.2
CsaV3_4G002640 Cucumis sativus L. HOM05D007459 ORTHO05D009234 4.1e-37 158.7 168 53.0
Rhsim09G0013300 Rhododendron simsii HOM05D007459 ORTHO05D009234 7.0e-37 157.9 173 48.6
Peaxi162Scf00180g00063 Petunia axillaris HOM05D007459 ORTHO05D009234 1.6e-36 156.8 172 49.4
vmacro06567 Vaccinium macrocarpon HOM05D007459 ORTHO05D009234 2.0e-36 156.4 175 49.7
unitig_85.g27223 Utricularia gibba HOM05D007459 ORTHO05D009234 1.3e-35 153.7 171 50.9
Nitab4.5_0002553g0080 Nicotiana tabacum HOM05D007459 ORTHO05D009234 1.7e-35 153.3 172 50.0
Lsat_1_v5_gn_8_158021 Lactuca sativa HOM05D007459 ORTHO05D009234 6.5e-35 151.4 171 46.2
Psat5g291760 Pisum sativum HOM05D007459 ORTHO05D009234 2.5e-34 149.4 172 47.1
HanXRQChr14g0433791 Helianthus annuus HOM05D007459 ORTHO05D009234 5.5e-34 148.3 170 46.5
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 5.5e-34 148.3 161 50.9
Lj3g0013618 Lotus japonicus HOM05D007459 ORTHO05D009234 7.2e-34 147.9 174 48.3
Migut.N03078 Erythranthe guttata HOM05D007459 ORTHO05D009234 2.1e-33 146.4 174 49.4
Ca_01236_v3 Cicer arietinum L. HOM05D007459 ORTHO05D009234 4.7e-33 145.2 174 44.8
TPR.G13012 Trifolium pratense HOM05D007459 ORTHO05D009234 4.7e-33 145.2 174 47.1
TPR.G6565 Trifolium pratense HOM05D007459 ORTHO05D009234 6.1e-33 144.8 172 46.5
Medtr2g099440 Medicago truncatula HOM05D007459 ORTHO05D009234 4.4e-31 138.7 172 45.3
Os04g0495300 Oryza sativa ssp. japonica HOM05D007459 ORTHO05D009234 5.7e-31 138.3 173 46.8
Phvul.005G155700 Phaseolus vulgaris HOM05D007459 ORTHO05D009234 2.2e-30 136.3 170 42.9
Glyma.13G346600 Glycine max HOM05D007459 ORTHO05D009234 9.1e-29 131.0 172 42.4
Actinidia27099 Actinidia chinensis HOM05D007459 ORTHO05D009234 1.3e-27 127.1 142 49.3
EL10Ac3g06032 Beta vulgaris HOM05D007459 ORTHO05D009234 2.3e-27 126.3 173 43.4
HPP92_004524 Vanilla planifolia HOM05D007459 ORTHO05D009234 2.9e-27 125.9 171 44.4
DCAR_028411 Daucus carota HOM05D007459 ORTHO05D009234 5.0e-27 125.2 170 39.4
ClCG07G015090 Citrullus lanatus HOM05D007459 ORTHO05D009234 3.3e-26 122.5 172 44.2
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 5.5e-26 121.7 154 45.5
ATR0743G068 Amborella trichopoda HOM05D007459 ORTHO05D009234 7.2e-26 121.3 172 44.2
Zm00001eb078650 Zea mays HOM05D007459 ORTHO05D009234 1.2e-25 120.6 171 45.0
AUR62002368 Chenopodium quinoa HOM05D007459 ORTHO05D009234 6.1e-25 118.2 172 41.9
Duzib151G0582 Durio zibethinus HOM05D007459 ORTHO05D009234 8.0e-25 117.9 124 54.8
AUR62023818 Chenopodium quinoa HOM05D007459 ORTHO05D009234 3.4e-23 112.5 172 40.1
Eucgr.L02147 Eucalyptus grandis HOM05D007459 ORTHO05D009234 4.1e-21 105.5 150 41.3
HPP92_004533 Vanilla planifolia HOM05D007459 ORTHO05D009234 1.6e-20 103.6 134 47.8
Ah.07g202500 Amaranthus hybridus HOM05D007459 ORTHO05D009234 2.1e-17 93.2 173 36.4
EL10Ac5g11171 Beta vulgaris HOM05D007459 ORTHO05D009234 3.0e-16 89.4 115 43.5
EL10Ac9g22812 Beta vulgaris HOM05D007459 ORTHO05D009234 1.5e-15 87.0 155 38.1
SEGI_40343 Sequoiadendron giganteum HOM05D007459 ORTHO05D009234 4.6e-12 75.5 137 34.3
Pp3c17_9330 Physcomitrium patens HOM05D007459 ORTHO05D009234 6.0e-12 75.1 142 33.1
EL10Ac4g10228 Beta vulgaris HOM05D007459 ORTHO05D009234 8.6e-11 71.2 140 32.9
Mapoly0038s0008 Marchantia polymorpha HOM05D007459 ORTHO05D009234 1.2e-09 67.4 146 28.8
Pp3c3_12780 Physcomitrium patens HOM05D007459 ORTHO05D009234 2.1e-09 66.6 186 29.0
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 1.4e-08 63.9 63 49.2
ECA238G4467 Erigeron canadensis HOM05D007459 ORTHO05D009234 4.0e-08 62.4 71 45.1
EL10Ac3g06136 Beta vulgaris HOM05D007459 ORTHO05D009234 1.3e-06 57.4 91 38.5


User provided reference genes

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