Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g25610 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.1e-52 209.5 97 100.0
BcaB02g08929 Brassica carinata HOM05D007394 ORTHO05D009996 1.7e-40 169.1 97 79.4
Sp4g25600 Schrenkiella parvula HOM05D007394 ORTHO05D009996 9.3e-39 163.3 86 81.4
A05p03840 Brassica napus HOM05D007394 ORTHO05D009996 1.0e-37 159.8 98 75.5
BcaC02g12378 Brassica carinata HOM05D007394 ORTHO05D009996 1.3e-37 159.5 96 75.0
Thhalv10001746m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 1.7e-37 159.1 86 80.2
C04p70500 Brassica napus HOM05D007394 ORTHO05D009996 3.0e-37 158.3 97 76.3
A04p32800 Brassica napus HOM05D007394 ORTHO05D009996 3.9e-37 157.9 95 73.7
BraA04t18742Z Brassica rapa HOM05D007394 ORTHO05D009996 3.9e-37 157.9 95 73.7
BraA05t19371Z Brassica rapa HOM05D007394 ORTHO05D009996 5.1e-37 157.5 98 74.5
AT2G43510 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.1e-36 156.4 86 79.1
BcaB02g10434 Brassica carinata HOM05D007394 ORTHO05D009996 1.1e-36 156.4 99 74.7
BcaB02g08928 Brassica carinata HOM05D007394 ORTHO05D009996 1.5e-36 156.0 98 73.5
BcaB02g08934 Brassica carinata HOM05D007394 ORTHO05D009996 2.5e-36 155.2 87 75.9
AL2G24960 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 3.3e-36 154.8 85 80.0
C04p04590 Brassica napus HOM05D007394 ORTHO05D009996 3.3e-36 154.8 97 74.2
BraA05t19373Z Brassica rapa HOM05D007394 ORTHO05D009996 3.3e-36 154.8 97 74.2
A04p32790 Brassica napus HOM05D007394 ORTHO05D009996 9.6e-36 153.3 97 74.2
A05p03820 Brassica napus HOM05D007394 ORTHO05D009996 9.6e-36 153.3 87 73.6
BolC4t22090H Brassica oleracea HOM05D007394 ORTHO05D009996 9.6e-36 153.3 97 73.2
CARHR138610 Cardamine hirsuta HOM05D007394 ORTHO05D009996 9.6e-36 153.3 87 78.2
BcaC02g12386 Brassica carinata HOM05D007394 ORTHO05D009996 1.3e-35 152.9 87 73.6
C04p04520 Brassica napus HOM05D007394 ORTHO05D009996 1.3e-35 152.9 87 73.6
A04p32810 Brassica napus HOM05D007394 ORTHO05D009996 3.6e-35 151.4 101 74.3
BraA04t18743Z Brassica rapa HOM05D007394 ORTHO05D009996 3.6e-35 151.4 101 74.3
BcaC02g12384 Brassica carinata HOM05D007394 ORTHO05D009996 4.8e-35 151.0 87 75.9
C04p04540 Brassica napus HOM05D007394 ORTHO05D009996 4.8e-35 151.0 87 75.9
BolC4t22087H Brassica oleracea HOM05D007394 ORTHO05D009996 4.8e-35 151.0 87 75.9
BcaC02g12382 Brassica carinata HOM05D007394 ORTHO05D009996 8.1e-35 150.2 96 72.9
C04p04550 Brassica napus HOM05D007394 ORTHO05D009996 8.1e-35 150.2 96 72.9
Carub.0004s2597 Capsella rubella HOM05D007394 ORTHO05D009996 1.1e-34 149.8 83 75.9
A05p03830 Brassica napus HOM05D007394 ORTHO05D009996 3.1e-34 148.3 95 74.7
AL4G42300 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 4.0e-34 147.9 86 74.4
AT1G47540 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 5.3e-34 147.5 99 70.7
BcaC02g12381 Brassica carinata HOM05D007394 ORTHO05D009996 5.3e-34 147.5 99 70.7
BcaB06g29322 Brassica carinata HOM05D007394 ORTHO05D009996 9.0e-34 146.7 76 80.3
CARHR138620 Cardamine hirsuta HOM05D007394 ORTHO05D009996 2.0e-33 145.6 91 70.3
AL1G53780 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 3.4e-33 144.8 99 69.7
Thhalv10001697m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 3.4e-33 144.8 88 78.4
A03p24300 Brassica napus HOM05D007394 ORTHO05D009996 5.8e-33 144.1 87 77.0
BraA03t11638Z Brassica rapa HOM05D007394 ORTHO05D009996 5.8e-33 144.1 87 77.0
BraA03t11640Z Brassica rapa HOM05D007394 ORTHO05D009996 5.8e-33 144.1 87 77.0
BcaB06g29320 Brassica carinata HOM05D007394 ORTHO05D009996 7.6e-33 143.7 97 72.2
AL4G42320 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.3e-32 142.9 101 65.3
Carub.0004s2598 Capsella rubella HOM05D007394 ORTHO05D009996 1.3e-32 142.9 89 71.9
AL4G42310 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.7e-32 142.5 89 73.0
BolC4t28552H Brassica oleracea HOM05D007394 ORTHO05D009996 4.9e-32 141.0 101 70.3
CARHR138630 Cardamine hirsuta HOM05D007394 ORTHO05D009996 4.9e-32 141.0 92 70.7
AT2G43535 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 6.4e-32 140.6 74 74.3
BcaB06g29321 Brassica carinata HOM05D007394 ORTHO05D009996 6.4e-32 140.6 73 78.1
BcaC02g07171 Brassica carinata HOM05D007394 ORTHO05D009996 6.4e-32 140.6 106 68.9
C04p70530 Brassica napus HOM05D007394 ORTHO05D009996 6.4e-32 140.6 101 69.3
BcaC01g05230 Brassica carinata HOM05D007394 ORTHO05D009996 1.1e-31 139.8 87 75.9
Sp3g24100 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.9e-31 139.0 92 70.7
AT2G43520 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 4.2e-31 137.9 89 70.8
A03p24290 Brassica napus HOM05D007394 ORTHO05D009996 4.2e-31 137.9 90 72.2
BraA03t11637Z Brassica rapa HOM05D007394 ORTHO05D009996 4.2e-31 137.9 90 72.2
BraA03t11639Z Brassica rapa HOM05D007394 ORTHO05D009996 4.2e-31 137.9 90 72.2
BcaB02g08930 Brassica carinata HOM05D007394 ORTHO05D009996 7.1e-31 137.1 100 71.0
Aa31LG1G25260 Aethionema arabicum HOM05D007394 ORTHO05D009996 2.1e-30 135.6 97 64.9
Carub.0004s2602 Capsella rubella HOM05D007394 ORTHO05D009996 2.7e-30 135.2 97 61.9
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 6.0e-30 134.0 85 67.1
BcaB01g03378 Brassica carinata HOM05D007394 ORTHO05D009996 3.0e-29 131.7 89 71.9
THA.LOC104803941 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.5e-28 129.4 86 66.3
Carub.0004s2599 Capsella rubella HOM05D007394 ORTHO05D009996 1.9e-28 129.0 87 64.4
THA.LOC104803932 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 4.3e-28 127.9 84 65.5
BcaC02g07172 Brassica carinata HOM05D007394 ORTHO05D009996 2.1e-27 125.6 76 71.1
Carub.0002s0551 Capsella rubella HOM05D007394 ORTHO05D009996 3.7e-27 124.8 89 62.9
THA.LOC109116252 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 8.1e-27 123.6 86 64.0
AL8G26520 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.4e-26 122.9 91 59.3
BcaB06g29323 Brassica carinata HOM05D007394 ORTHO05D009996 1.4e-26 122.9 80 65.0
Sp3g24200 Schrenkiella parvula HOM05D007394 ORTHO05D009996 6.9e-26 120.6 88 65.9
THA.LOC104798701 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.0e-25 119.0 87 65.5
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 2.2e-24 115.5 69 73.9
BolC3t15251H Brassica oleracea HOM05D007394 ORTHO05D009996 2.2e-24 115.5 72 79.2
CARHR138640 Cardamine hirsuta HOM05D007394 ORTHO05D009996 6.4e-24 114.0 95 56.8
Aa31LG1G24860 Aethionema arabicum HOM05D007394 ORTHO05D009996 3.5e-22 108.2 64 67.2
CARHR138650 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.3e-21 106.3 97 48.5
THA.LOC104805814 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.3e-21 105.5 84 54.8
AT2G43530 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.5e-20 102.8 89 56.2
THA.LOC104803915 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.8e-18 95.9 86 52.3
AL4G42350 Arabidopsis lyrata HOM05D007394 ORTHO05D015383 5.3e-18 94.4 86 51.2
Sp4g02290 Schrenkiella parvula HOM05D007394 ORTHO05D009234 6.9e-18 94.0 91 50.5
AT2G43550 Arabidopsis thaliana HOM05D007394 ORTHO05D015383 9.0e-18 93.6 87 50.6
Carub.0004s2603 Capsella rubella HOM05D007394 ORTHO05D015383 1.7e-16 89.4 86 48.8
Carub.0004s2604 Capsella rubella HOM05D007394 ORTHO05D009996 2.2e-16 89.0 97 46.4
CARHR138680 Cardamine hirsuta HOM05D007394 ORTHO05D015383 2.2e-16 89.0 86 50.0
THA.LOC104803922 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 6.5e-16 87.4 87 48.3
C04p70470 Brassica napus HOM05D007394 ORTHO05D009234 1.1e-15 86.7 94 54.3
Thhalv10001696m.g Eutrema salsugineum HOM05D007394 ORTHO05D015383 1.4e-15 86.3 89 46.1
A04p32760 Brassica napus HOM05D007394 ORTHO05D009234 2.5e-15 85.5 94 53.2
Sp4g25660 Schrenkiella parvula HOM05D007394 ORTHO05D015383 2.5e-15 85.5 86 46.5
BcaB06g29326 Brassica carinata HOM05D007394 ORTHO05D015383 4.2e-15 84.7 87 48.3
BcaC02g07166 Brassica carinata HOM05D007394 ORTHO05D015383 4.2e-15 84.7 87 48.3
C04p70540 Brassica napus HOM05D007394 ORTHO05D015383 4.2e-15 84.7 87 48.3
BolC4t28555H Brassica oleracea HOM05D007394 ORTHO05D015383 4.2e-15 84.7 87 48.3
A04p32830 Brassica napus HOM05D007394 ORTHO05D015383 5.5e-15 84.3 87 48.3
BraA04t18745Z Brassica rapa HOM05D007394 ORTHO05D015383 5.5e-15 84.3 87 48.3
A04p32770 Brassica napus HOM05D007394 ORTHO05D033140 2.3e-13 79.0 88 52.3
BraA04t18740Z Brassica rapa HOM05D007394 ORTHO05D033140 2.3e-13 79.0 88 52.3
CARHR123510 Cardamine hirsuta HOM05D014590 ORTHO05D017585 6.7e-13 77.4 89 49.4
BolC4t28551H Brassica oleracea HOM05D007394 ORTHO05D033140 8.7e-13 77.0 87 48.3
Carub.0004s2601 Capsella rubella HOM05D007394 ORTHO05D009996 1.5e-12 76.3 90 45.6
A04p02110 Brassica napus HOM05D014590 ORTHO05D017585 3.7e-11 71.6 88 45.5
BraA04t15937Z Brassica rapa HOM05D014590 ORTHO05D017585 3.7e-11 71.6 88 45.5
BcaC02g10070 Brassica carinata HOM05D014590 ORTHO05D017585 2.4e-10 68.9 88 43.2
C04p33170 Brassica napus HOM05D014590 ORTHO05D017585 2.5e-07 58.9 83 43.4
BolC4t24876H Brassica oleracea HOM05D014590 ORTHO05D017585 2.5e-07 58.9 83 43.4


User provided reference genes

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