Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g25030 Schrenkiella parvula HOM05D002705 ORTHO05D009765 1.7e-151 539.3 268 100.0
Thhalv10017067m.g Eutrema salsugineum HOM05D002705 ORTHO05D009765 1.9e-121 439.5 273 81.7
AT2G42900 Arabidopsis thaliana HOM05D002705 ORTHO05D009765 1.9e-113 412.9 269 77.0
CARHR137970 Cardamine hirsuta HOM05D002705 ORTHO05D009765 2.7e-112 409.1 270 77.4
BcaC02g12424 Brassica carinata HOM05D002705 ORTHO05D009765 2.6e-107 392.5 270 75.6
BolC4t22036H Brassica oleracea HOM05D002705 ORTHO05D009765 2.6e-107 392.5 270 75.6
C04p04000 Brassica napus HOM05D002705 ORTHO05D009765 1.1e-105 387.1 261 75.5
Carub.0004s2537 Capsella rubella HOM05D002705 ORTHO05D009765 2.1e-104 382.9 260 74.6
A05p03430 Brassica napus HOM05D002705 ORTHO05D009765 3.1e-100 369.0 258 72.9
BraA05t19329Z Brassica rapa HOM05D002705 ORTHO05D009765 5.8e-99 364.8 257 72.4
Aa31LG1G24660 Aethionema arabicum HOM05D000512 ORTHO05D000861 3.9e-79 298.9 254 61.0
AL4G41540 Arabidopsis lyrata HOM05D002705 ORTHO05D009765 2.1e-77 293.1 185 82.2
THA.LOC104802278 Tarenaya hassleriana HOM05D002705 ORTHO05D009765 3.8e-66 255.8 266 53.4
Ciclev10033364m.g Citrus clementina HOM05D002705 ORTHO05D009765 7.2e-49 198.4 252 42.5
Atru.chr6.2088 Acer truncatum HOM05D002705 ORTHO05D009765 2.9e-42 176.4 238 43.7
MELO3C014476.2 Cucumis melo HOM05D002705 ORTHO05D009765 7.2e-41 171.8 258 40.3
Cpa.g.sc50.86 Carica papaya HOM05D002705 ORTHO05D009765 2.1e-40 170.2 242 39.7
FAN05G3181 Fragaria x ananassa HOM05D002705 ORTHO05D004955 6.1e-40 168.7 265 39.6
DCAR_009797 Daucus carota HOM05D002705 ORTHO05D009765 1.4e-39 167.5 235 39.6
QL08p044244 Quercus lobata HOM05D002705 ORTHO05D009765 1.8e-39 167.2 231 40.7
Solyc10g007750.1 Solanum lycopersicum HOM05D002705 ORTHO05D009765 1.8e-39 167.2 264 37.5
FAN14G4218 Fragaria x ananassa HOM05D002705 ORTHO05D009765 6.7e-39 165.2 265 38.9
Nn4g26472 Nelumbo nucifera HOM05D002705 ORTHO05D009765 6.7e-39 165.2 263 37.6
Sed0010957 Sechium edule HOM05D002705 ORTHO05D009765 6.7e-39 165.2 251 37.8
FvH4_6g38280 Fragaria vesca HOM05D002705 ORTHO05D009765 8.8e-39 164.9 265 38.9
TAR627G0723 Trochodendron aralioides HOM05D002705 ORTHO05D009765 8.8e-39 164.9 233 38.2
GSVIVG01020876001 Vitis vinifera HOM05D002705 ORTHO05D009765 2.0e-38 163.7 245 37.6
Nitab4.5_0002027g0160 Nicotiana tabacum HOM05D002705 ORTHO05D009765 3.3e-38 162.9 270 36.3
Prupe.3G173400 Prunus persica HOM05D002705 ORTHO05D009765 4.4e-38 162.5 260 38.1
Nn3g20892 Nelumbo nucifera HOM05D002705 ORTHO05D009765 2.2e-37 160.2 215 39.1
CsaV3_6G038120 Cucumis sativus L. HOM05D002705 ORTHO05D009765 2.8e-37 159.8 254 40.2
ClCG09G022450 Citrullus lanatus HOM05D002705 ORTHO05D009765 4.8e-37 159.1 229 41.5
Dinv00192 Davidia involucrata HOM05D002705 ORTHO05D009765 4.8e-37 159.1 220 42.7
Hma1.2p1_0529F.1_g173240 Hydrangea macrophylla HOM05D002705 ORTHO05D009765 1.1e-36 157.9 236 40.3
Peaxi162Scf00035g00292 Petunia axillaris HOM05D002705 ORTHO05D009765 2.4e-36 156.8 278 34.9
SGA_v2.0_scaffold70G23654 Striga asiatica HOM05D002705 ORTHO05D009765 3.1e-36 156.4 247 38.9
Thecc.01G162500 Theobroma cacao HOM05D002705 ORTHO05D009765 1.2e-35 154.5 289 34.6
FAN09G3459 Fragaria x ananassa HOM05D002705 ORTHO05D009765 1.6e-35 154.1 240 38.8
arahy.Tifrunner.gnm1.ann1.4LV4GA Arachis hypogaea HOM05D002705 ORTHO05D009765 2.6e-35 153.3 265 34.0
TPR.G16998 Trifolium pratense HOM05D002705 ORTHO05D009765 3.5e-35 152.9 249 37.3
arahy.Tifrunner.gnm1.ann1.Y3CUXW Arachis hypogaea HOM05D002705 ORTHO05D009765 4.5e-35 152.5 268 34.0
Medtr3g048300 Medicago truncatula HOM05D002705 ORTHO05D009765 7.7e-35 151.8 239 35.6
MSTRG.6743 Avicennia marina HOM05D002705 ORTHO05D009765 1.0e-34 151.4 246 34.1
Gohir.D04G036300 Gossypium hirsutum HOM05D002705 ORTHO05D009765 1.1e-33 147.9 279 34.8
Potri.005G202300 Populus trichocarpa HOM05D002705 ORTHO05D009765 1.5e-33 147.5 250 35.6
PGSC0003DMG400021284 Solanum tuberosum HOM05D002705 ORTHO05D009765 1.5e-33 147.5 270 34.4
CSS0039583 Camellia sinensis var. sinensis HOM05D002705 ORTHO05D009765 1.9e-33 147.1 273 36.3
Manes.02G084700 Manihot esculenta HOM05D002705 ORTHO05D009765 1.9e-33 147.1 243 36.2
Gorai.012G041100 Gossypium raimondii HOM05D002705 ORTHO05D009765 2.5e-33 146.7 279 34.8
Ca_12230_v3 Cicer arietinum L. HOM05D002705 ORTHO05D009765 7.2e-33 145.2 235 35.3
Sed0024385 Sechium edule HOM05D002705 ORTHO05D009765 9.4e-33 144.8 249 36.9
PSO675G7613 Papaver somniferum HOM05D002705 ORTHO05D009765 1.2e-32 144.4 284 34.9
Rhsim06G0115800 Rhododendron simsii HOM05D002705 ORTHO05D009765 1.2e-32 144.4 234 38.9
Lalb_Chr03g0031241 Lupinus albus HOM05D002705 ORTHO05D009765 1.6e-32 144.1 246 36.2
Duzib264G0970 Durio zibethinus HOM05D002705 ORTHO05D009765 2.1e-32 143.7 164 45.1
Glyma.18G107200 Glycine max HOM05D002705 ORTHO05D009765 2.7e-32 143.3 270 35.2
Migut.M00492 Erythranthe guttata HOM05D002705 ORTHO05D009765 6.1e-32 142.1 235 36.6
Gohir.A05G379200 Gossypium hirsutum HOM05D002705 ORTHO05D009765 1.0e-31 141.4 262 35.1
VMungo0540G0513 Vigna mungo HOM05D002705 ORTHO05D009765 1.8e-31 140.6 235 33.6
COL.COLO4_08449 Corchorus olitorius HOM05D000244 ORTHO05D009765 3.0e-31 139.8 296 32.8
Lsat_1_v5_gn_5_149781 Lactuca sativa HOM05D002705 ORTHO05D009765 4.0e-31 139.4 277 34.7
Lj6g0006663 Lotus japonicus HOM05D002705 ORTHO05D009765 5.2e-31 139.0 239 37.2
Actinidia06118 Actinidia chinensis HOM05D002705 ORTHO05D009765 6.8e-31 138.7 256 36.7
FAN02G0759 Fragaria x ananassa HOM05D002705 ORTHO05D009765 6.8e-31 138.7 210 42.4
MBI10_g34778_MAGBIO Magnolia biondii HOM05D002705 ORTHO05D009765 1.5e-30 137.5 186 38.2
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 2.0e-30 137.1 226 32.3
SalBow8G3518 Salvia bowleyana HOM05D002705 ORTHO05D009765 2.0e-30 137.1 254 33.9
HanXRQChr01g0007061 Helianthus annuus HOM05D002705 ORTHO05D009765 4.4e-30 136.0 271 36.5
Sc21g0001660 Simmondsia chinensis HOM05D002705 ORTHO05D009765 4.4e-30 136.0 229 33.2
Phvul.006G032900 Phaseolus vulgaris HOM05D002705 ORTHO05D009765 5.7e-30 135.6 222 35.1
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 1.3e-29 134.4 235 31.1
Aqoxy1G01839 Aquilegia oxysepala HOM05D002705 ORTHO05D009765 2.8e-29 133.3 260 35.4
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 4.8e-29 132.5 229 32.8
Os05g0582000 Oryza sativa ssp. japonica HOM05D002705 ORTHO05D009765 1.6e-27 127.5 224 35.3
PSO017G2465 Papaver somniferum HOM05D002705 ORTHO05D009765 1.0e-23 114.8 265 32.1
Zm00001eb297100 Zea mays HOM05D002705 ORTHO05D009765 2.3e-23 113.6 225 35.1
Psat5g181640 Pisum sativum HOM05D002705 ORTHO05D009765 3.4e-22 109.8 195 34.9
Sabra05G0153700 Salix brachista HOM05D002705 ORTHO05D009765 4.4e-22 109.4 206 32.5
Zm00001eb344730 Zea mays HOM05D002705 ORTHO05D009765 4.4e-22 109.4 239 32.2
Eucgr.K01214 Eucalyptus grandis HOM05D002705 ORTHO05D009765 7.5e-22 108.6 185 36.2
RcHm_v2.0_Chr2g0151591 Rosa chinensis HOM05D002705 ORTHO05D009765 7.5e-22 108.6 170 38.2
Ah.11g045780 Amaranthus hybridus HOM05D002705 ORTHO05D009765 6.3e-21 105.5 261 28.4
Sopen10g003660 Solanum pennellii HOM05D002705 ORTHO05D009765 3.1e-20 103.2 181 33.7
CDE09G0375 Ceratophyllum demersum HOM05D002705 ORTHO05D009765 7.0e-20 102.1 213 30.0
TWI59G0299 Tripterygium wilfordii HOM05D002705 ORTHO05D009765 1.5e-17 94.4 168 37.5
BolC4t22040H Brassica oleracea HOM05D002705 ORTHO05D009765 3.0e-15 86.7 60 73.3
unitig_62.g23106 Utricularia gibba HOM05D002705 ORTHO05D009765 9.8e-14 81.6 165 30.3
TAR627G0068 Trochodendron aralioides HOM05D002705 ORTHO05D009765 3.5e-11 73.2 107 36.4
CAN.G1546.3 Capsicum annuum HOM05D000541 ORTHO05D000137 6.6e-10 68.9 132 35.6
ECA248G0079 Erigeron canadensis HOM05D002705 ORTHO05D009765 3.4e-06 56.6 120 32.5


User provided reference genes

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