Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g24780 Schrenkiella parvula HOM05D002761 ORTHO05D016695 5.1e-99 364.4 179 100.0
A08p03170 Brassica napus HOM05D002761 ORTHO05D003351 1.1e-32 144.1 159 52.2
BraA08t32349Z Brassica rapa HOM05D002761 ORTHO05D003351 1.1e-32 144.1 159 52.2
Sp1g20170 Schrenkiella parvula HOM05D002761 ORTHO05D003351 9.1e-32 141.0 159 50.3
A09p42070 Brassica napus HOM05D002761 ORTHO05D003351 4.5e-31 138.7 159 50.3
C05p21800 Brassica napus HOM05D002761 ORTHO05D003351 4.5e-31 138.7 159 50.3
BraA07t29183Z Brassica rapa HOM05D002761 ORTHO05D003351 4.5e-31 138.7 159 50.3
BraA09t39693Z Brassica rapa HOM05D002761 ORTHO05D003351 4.5e-31 138.7 159 50.3
Carub.0001s2218 Capsella rubella HOM05D002761 ORTHO05D003351 7.7e-31 137.9 169 47.9
C07p20980 Brassica napus HOM05D002761 ORTHO05D003351 1.0e-30 137.5 159 50.3
BolC5t30873H Brassica oleracea HOM05D002761 ORTHO05D003351 1.3e-30 137.1 159 49.7
A07p14260 Brassica napus HOM05D002761 ORTHO05D003351 2.2e-30 136.3 159 49.7
BolC7t42629H Brassica oleracea HOM05D002761 ORTHO05D003351 2.9e-30 136.0 159 49.7
Thhalv10007128m.g Eutrema salsugineum HOM05D002761 ORTHO05D003351 3.8e-30 135.6 159 49.7
AL1G36200 Arabidopsis lyrata HOM05D002761 ORTHO05D003351 6.5e-30 134.8 169 47.9
AT1G22660 Arabidopsis thaliana HOM05D002761 ORTHO05D003351 6.5e-30 134.8 169 47.9
BcaC06g34983 Brassica carinata HOM05D002761 ORTHO05D003351 8.5e-30 134.4 159 49.1
BcaB03g14191 Brassica carinata HOM05D002761 ORTHO05D003351 3.2e-29 132.5 159 48.4
CARHR163300 Cardamine hirsuta HOM05D002761 ORTHO05D003351 2.7e-28 129.4 153 52.3
BolC5t33088H Brassica oleracea HOM05D002761 ORTHO05D003351 1.0e-27 127.5 151 49.0
CARHR023030 Cardamine hirsuta HOM05D002761 ORTHO05D003351 2.3e-27 126.3 159 47.2
Aa31LG7G6560 Aethionema arabicum HOM05D002761 ORTHO05D003351 8.2e-25 117.9 191 42.4
BcaC05g24852 Brassica carinata HOM05D002761 ORTHO05D003351 4.1e-24 115.5 152 46.1
C05p08980 Brassica napus HOM05D002761 ORTHO05D003351 1.0e-22 110.9 100 58.0
THA.LOC104809739 Tarenaya hassleriana HOM05D002761 ORTHO05D003351 5.0e-22 108.6 159 42.1
Eucgr.F03976 Eucalyptus grandis HOM05D002761 ORTHO05D003351 6.5e-22 108.2 157 40.8
Atru.chr13.1730 Acer truncatum HOM05D002761 ORTHO05D003351 5.5e-21 105.1 159 40.9
CARHR114710 Cardamine hirsuta HOM05D002761 ORTHO05D003351 7.2e-21 104.8 124 49.2
QL03p042862 Quercus lobata HOM05D002761 ORTHO05D003351 9.4e-21 104.4 159 42.1
MD10G1052700 Malus domestica HOM05D002761 ORTHO05D003351 1.6e-20 103.6 159 41.5
Oeu045162.1 Olea europaea HOM05D002761 ORTHO05D003351 2.7e-20 102.8 157 39.5
Dinv15069 Davidia involucrata HOM05D002761 ORTHO05D003351 8.0e-20 101.3 157 39.5
TWI60G0671 Tripterygium wilfordii HOM05D002761 ORTHO05D003351 1.4e-19 100.5 171 38.0
CiPaw.05G166400 Carya illinoinensis HOM05D002761 ORTHO05D003351 1.8e-19 100.1 157 41.4
Eucgr.F02738 Eucalyptus grandis HOM05D002761 ORTHO05D003351 1.8e-19 100.1 157 39.5
MELO3C019943.2 Cucumis melo HOM05D002761 ORTHO05D003351 4.0e-19 99.0 154 40.9
Eucgr.K02157 Eucalyptus grandis HOM05D002761 ORTHO05D003351 4.0e-19 99.0 157 38.2
Prupe.6G147900 Prunus persica HOM05D002761 ORTHO05D003351 4.0e-19 99.0 159 40.9
Atru.chr4.2860 Acer truncatum HOM05D002761 ORTHO05D003351 5.2e-19 98.6 159 40.3
CANSAT54G2022 Cannabis sativa HOM05D002761 ORTHO05D003351 5.2e-19 98.6 161 39.8
CsaV3_6G004730 Cucumis sativus L. HOM05D002761 ORTHO05D003351 5.2e-19 98.6 157 40.1
BcaC07g41804 Brassica carinata HOM05D002761 ORTHO05D003351 6.8e-19 98.2 174 41.4
Lj5g0020162 Lotus japonicus HOM05D002761 ORTHO05D003351 6.8e-19 98.2 163 37.4
Aqoxy5G00310 Aquilegia oxysepala HOM05D002761 ORTHO05D003351 1.5e-18 97.1 157 37.6
Oeu021213.2 Olea europaea HOM05D002761 ORTHO05D003351 1.5e-18 97.1 157 39.5
Eucgr.F02604 Eucalyptus grandis HOM05D002761 ORTHO05D003351 2.0e-18 96.7 157 39.5
Manes.18G102400 Manihot esculenta HOM05D002761 ORTHO05D003351 2.0e-18 96.7 159 40.3
Nn5g27660 Nelumbo nucifera HOM05D002761 ORTHO05D003351 2.0e-18 96.7 180 35.6
QL08p012793 Quercus lobata HOM05D002761 ORTHO05D003351 2.0e-18 96.7 157 38.9
SGA_v2.0_scaffold24G10561 Striga asiatica HOM05D002761 ORTHO05D003351 2.0e-18 96.7 157 37.6
TWI34G1193 Tripterygium wilfordii HOM05D002761 ORTHO05D003351 2.6e-18 96.3 171 36.8
Ciclev10000691m.g Citrus clementina HOM05D002761 ORTHO05D003351 3.4e-18 95.9 159 39.0
Migut.C01266 Erythranthe guttata HOM05D002761 ORTHO05D003351 5.7e-18 95.1 157 38.2
Duzib177G0575 Durio zibethinus HOM05D002761 ORTHO05D003351 7.5e-18 94.7 157 35.7
FvH4_4g33440 Fragaria vesca HOM05D002761 ORTHO05D003351 7.5e-18 94.7 157 38.2
FAN12G1608 Fragaria x ananassa HOM05D002761 ORTHO05D003351 7.5e-18 94.7 157 38.2
Thecc.08G185200 Theobroma cacao HOM05D002761 ORTHO05D003351 7.5e-18 94.7 157 38.9
PGR042G3223 Punica granatum HOM05D002761 ORTHO05D003351 9.8e-18 94.4 157 36.9
Potri.013G111300 Populus trichocarpa HOM05D002761 ORTHO05D003351 1.3e-17 94.0 159 38.4
Hund27091 Selenicereus undatus HOM05D002761 ORTHO05D003351 1.3e-17 94.0 161 41.6
Gorai.009G263600 Gossypium raimondii HOM05D002761 ORTHO05D003351 1.7e-17 93.6 157 36.9
RcHm_v2.0_Chr4g0411681 Rosa chinensis HOM05D002761 ORTHO05D003351 1.7e-17 93.6 157 38.9
Sed0017641 Sechium edule HOM05D002761 ORTHO05D003351 1.7e-17 93.6 157 38.2
arahy.Tifrunner.gnm1.ann1.5UEM0D Arachis hypogaea HOM05D002761 ORTHO05D003351 2.2e-17 93.2 178 36.5
CSS0019088 Camellia sinensis var. sinensis HOM05D002761 ORTHO05D003351 2.2e-17 93.2 160 38.1
FAN22G1178 Fragaria x ananassa HOM05D002761 ORTHO05D003351 2.2e-17 93.2 157 38.2
Gohir.D05G253400 Gossypium hirsutum HOM05D002761 ORTHO05D003351 2.2e-17 93.2 157 37.6
arahy.Tifrunner.gnm1.ann1.Q9M74Z Arachis hypogaea HOM05D002761 ORTHO05D003351 2.8e-17 92.8 178 36.5
Sed0000900 Sechium edule HOM05D002761 ORTHO05D003351 2.8e-17 92.8 170 38.2
Actinidia23337 Actinidia chinensis HOM05D002761 ORTHO05D003351 4.8e-17 92.0 164 40.9
SalBow7G0542 Salvia bowleyana HOM05D002761 ORTHO05D003351 4.8e-17 92.0 157 36.9
Glyma.20G174400 Glycine max HOM05D002761 ORTHO05D003351 6.3e-17 91.7 170 34.1
Gohir.A05G250400 Gossypium hirsutum HOM05D002761 ORTHO05D003351 6.3e-17 91.7 157 36.9
Sc01g0001830 Simmondsia chinensis HOM05D002761 ORTHO05D003351 6.3e-17 91.7 161 38.5
Glyma.10G217700 Glycine max HOM05D002761 ORTHO05D003351 8.3e-17 91.3 170 35.3
arahy.Tifrunner.gnm1.ann1.984TS9 Arachis hypogaea HOM05D002761 ORTHO05D003351 1.1e-16 90.9 178 36.5
Cc10_g11600 Coffea canephora HOM05D002761 ORTHO05D003351 1.1e-16 90.9 154 37.7
PSO063G6902 Papaver somniferum HOM05D002761 ORTHO05D003351 1.1e-16 90.9 169 36.1
CAN.G761.16 Capsicum annuum HOM05D002761 ORTHO05D003351 1.4e-16 90.5 157 35.7
Thecc.10G143100 Theobroma cacao HOM05D002761 ORTHO05D003351 1.4e-16 90.5 157 38.2
unitig_747.g21798 Utricularia gibba HOM05D002761 ORTHO05D003351 1.4e-16 90.5 155 37.4
GSVIVG01034848001 Vitis vinifera HOM05D002761 ORTHO05D003351 1.8e-16 90.1 157 37.6
Solyc11g018770.3 Solanum lycopersicum HOM05D002761 ORTHO05D003351 2.4e-16 89.7 157 35.7
Sopen11g009950 Solanum pennellii HOM05D002761 ORTHO05D003351 2.4e-16 89.7 157 35.7
vmacro12482 Vaccinium macrocarpon HOM05D002761 ORTHO05D003351 2.4e-16 89.7 155 39.4
PSO170G5134 Papaver somniferum HOM05D002761 ORTHO05D003351 3.1e-16 89.4 169 34.9
AUR62004635 Chenopodium quinoa HOM05D002761 ORTHO05D003351 4.1e-16 89.0 156 40.4
QL08p012947 Quercus lobata HOM05D002761 ORTHO05D003351 4.1e-16 89.0 175 34.9
ATR0584G032 Amborella trichopoda HOM05D002761 ORTHO05D003351 5.4e-16 88.6 170 37.1
BcaB08g37366 Brassica carinata HOM05D002761 ORTHO05D003351 5.4e-16 88.6 182 37.9
LjContig00141g0028023 Lotus japonicus HOM05D002761 ORTHO05D003351 5.4e-16 88.6 159 35.8
arahy.Tifrunner.gnm1.ann1.3C4BUC Arachis hypogaea HOM05D002761 ORTHO05D003351 7.0e-16 88.2 178 35.4
RcHm_v2.0_Chr4g0442691 Rosa chinensis HOM05D002761 ORTHO05D003351 7.0e-16 88.2 157 37.6
SGA_v2.0_scaffold118G32501 Striga asiatica HOM05D002761 ORTHO05D003351 7.0e-16 88.2 145 38.6
Lalb_Chr06g0161951 Lupinus albus HOM05D002761 ORTHO05D003351 9.1e-16 87.8 170 35.3
COL.COLO4_23637 Corchorus olitorius HOM05D002761 ORTHO05D003351 1.2e-15 87.4 157 38.2
Hma1.2p1_0523F.1_g172030 Hydrangea macrophylla HOM05D002761 ORTHO05D003351 1.2e-15 87.4 154 37.0
Phvul.007G088400 Phaseolus vulgaris HOM05D002761 ORTHO05D003351 1.2e-15 87.4 157 36.3
EL10Ac1g00094 Beta vulgaris HOM05D002761 ORTHO05D003351 1.6e-15 87.0 159 37.1
PSO210G0794 Papaver somniferum HOM05D002761 ORTHO05D003351 1.6e-15 87.0 157 38.2
arahy.Tifrunner.gnm1.ann1.8YT8MI Arachis hypogaea HOM05D002761 ORTHO05D003351 2.0e-15 86.7 178 36.5
FAN17G0376 Fragaria x ananassa HOM05D002761 ORTHO05D003351 2.0e-15 86.7 157 36.9
VMungo0720G1634 Vigna mungo HOM05D002761 ORTHO05D003351 4.5e-15 85.5 157 36.3
TAR381G1193 Trochodendron aralioides HOM05D002761 ORTHO05D003351 7.7e-15 84.7 159 37.7
MD05G1045700 Malus domestica HOM05D002761 ORTHO05D003351 1.0e-14 84.3 165 36.4
Nitab4.5_0000167g0140 Nicotiana tabacum HOM05D002761 ORTHO05D003351 1.0e-14 84.3 145 37.9
DCAR_001058 Daucus carota HOM05D002761 ORTHO05D003351 1.3e-14 84.0 171 36.8
PSO832G2735 Papaver somniferum HOM05D002761 ORTHO05D003351 1.3e-14 84.0 145 37.2
Os12g0171200 Oryza sativa ssp. japonica HOM05D002761 ORTHO05D003351 1.7e-14 83.6 165 31.5
CDE04G1174 Ceratophyllum demersum HOM05D002761 ORTHO05D003351 2.2e-14 83.2 157 33.8
Medtr1g096870 Medicago truncatula HOM05D002761 ORTHO05D003351 2.2e-14 83.2 159 35.2
Sopen11g009830 Solanum pennellii HOM05D002761 ORTHO05D003351 2.2e-14 83.2 178 32.6
Psat6g173240 Pisum sativum HOM05D002761 ORTHO05D003351 2.9e-14 82.8 159 36.5
TPR.G15701 Trifolium pratense HOM05D002761 ORTHO05D003351 3.8e-14 82.4 165 34.5
Cfa015122 Carpinus fangiana HOM05D002761 ORTHO05D003351 4.2e-13 79.0 99 45.5
Lj4A473G33 Lonicera japonica HOM05D002761 ORTHO05D003351 7.2e-13 78.2 104 46.2
AL6G39960 Arabidopsis lyrata HOM05D002761 ORTHO05D003351 4.7e-12 75.5 94 50.0
C02p26430 Brassica napus HOM05D002761 ORTHO05D016695 4.7e-12 75.5 76 57.9
BolC2t08717H Brassica oleracea HOM05D002761 ORTHO05D016695 4.7e-12 75.5 76 57.9
RcHm_v2.0_Chr7g0192731 Rosa chinensis HOM05D002761 ORTHO05D003351 4.7e-12 75.5 199 32.2
ClCG08G008700 Citrullus lanatus HOM05D002761 ORTHO05D003351 2.3e-11 73.2 167 32.9
SHI09025 Sapria himalayana HOM05D002761 ORTHO05D003351 2.3e-11 73.2 101 45.5
Zm00001eb408070 Zea mays HOM05D002761 ORTHO05D003351 2.3e-11 73.2 165 30.3
C09p07730 Brassica napus HOM05D002761 ORTHO05D016695 3.0e-11 72.8 76 56.6
HPP92_003659 Vanilla planifolia HOM05D002761 ORTHO05D003351 4.0e-11 72.4 159 32.1
HPP92_003668 Vanilla planifolia HOM05D002761 ORTHO05D003351 4.0e-11 72.4 159 32.1
Cpa.g.sc66.29 Carica papaya HOM05D002761 ORTHO05D003351 5.2e-11 72.0 157 34.4
HanXRQChr09g0263631 Helianthus annuus HOM05D002761 ORTHO05D003351 5.2e-11 72.0 157 34.4
Ca_10624_v3 Cicer arietinum L. HOM05D002761 ORTHO05D005716 8.8e-11 71.2 159 32.1
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 8.8e-11 71.2 156 34.0
FAN07G1831 Fragaria x ananassa HOM05D002761 ORTHO05D003351 1.2e-10 70.9 104 41.3
HanXRQChr15g0490731 Helianthus annuus HOM05D002761 ORTHO05D003351 1.2e-10 70.9 158 34.8
Lsat_1_v5_gn_4_165000 Lactuca sativa HOM05D002761 ORTHO05D003351 1.2e-10 70.9 155 36.8
Nitab4.5_0001579g0100 Nicotiana tabacum HOM05D002761 ORTHO05D003351 1.5e-10 70.5 179 31.3
AagrBONN_evm.TU.Sc2ySwM_344.827 Anthoceros agrestis HOM05D002761 ORTHO05D003351 2.6e-10 69.7 181 29.8
BolC9t53690H Brassica oleracea HOM05D002761 ORTHO05D016695 3.4e-10 69.3 76 55.3
ECA248G3699 Erigeron canadensis HOM05D003159 ORTHO05D003780 3.4e-10 69.3 165 32.7
Lsat_1_v5_gn_6_104880 Lactuca sativa HOM05D002761 ORTHO05D003351 4.4e-10 68.9 155 36.8
BcaB04g19874 Brassica carinata HOM05D002761 ORTHO05D016695 9.8e-10 67.8 75 54.7
BcaC04g23493 Brassica carinata HOM05D002761 ORTHO05D016695 9.8e-10 67.8 75 54.7
Aqoxy1G03087 Aquilegia oxysepala HOM05D002761 ORTHO05D003351 1.7e-09 67.0 156 34.0
arahy.Tifrunner.gnm1.ann1.BB8XW9 Arachis hypogaea HOM05D002761 ORTHO05D003351 1.7e-09 67.0 221 29.9
PSO339G2349 Papaver somniferum HOM05D002761 ORTHO05D003351 4.9e-09 65.5 99 40.4
RcHm_v2.0_Chr7g0217301 Rosa chinensis HOM05D002761 ORTHO05D003351 4.9e-09 65.5 161 35.4
Lsat_1_v5_gn_6_104920 Lactuca sativa HOM05D002761 ORTHO05D003351 1.1e-08 64.3 133 36.1
Aqoxy4G00115 Aquilegia oxysepala HOM05D002761 ORTHO05D003351 1.8e-08 63.5 160 33.1
ECA238G1828 Erigeron canadensis HOM05D002761 ORTHO05D003351 3.1e-08 62.8 154 33.8
HanXRQChr14g0449031 Helianthus annuus HOM05D002761 ORTHO05D003351 3.1e-08 62.8 151 31.1
PSO339G0065 Papaver somniferum HOM05D002761 ORTHO05D003351 5.4e-08 62.0 99 38.4
Lsat_1_v5_gn_4_165020 Lactuca sativa HOM05D002761 ORTHO05D003351 7.0e-08 61.6 155 33.5
Haze_01552 Corylus avellana HOM05D002761 ORTHO05D003351 9.1e-08 61.2 78 47.4
AagrBONN_evm.TU.Sc2ySwM_117.2494 Anthoceros agrestis HOM05D002761 ORTHO05D003351 1.2e-07 60.8 117 33.3
A07p17830 Brassica napus HOM05D002761 ORTHO05D016695 1.6e-07 60.5 63 47.6
SEGI_41053 Sequoiadendron giganteum HOM05D002761 ORTHO05D003351 1.6e-07 60.5 157 28.0
A01p33970 Brassica napus HOM05D002761 ORTHO05D016695 7.7e-07 58.2 63 47.6
Peaxi162Scf01013g00232 Petunia axillaris HOM05D002761 ORTHO05D003351 7.7e-07 58.2 72 47.2
Mapoly0174s0023 Marchantia polymorpha HOM05D002761 ORTHO05D003351 3.8e-06 55.8 100 35.0
Rhsim03G0083700 Rhododendron simsii HOM05D002761 ORTHO05D003351 3.8e-06 55.8 71 46.5
BolC5t29644H Brassica oleracea HOM05D002761 ORTHO05D003351 8.6e-06 54.7 61 45.9


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