Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 2.2e-186 655.6 353 100.0
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 8.4e-130 467.6 361 75.9
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 1.6e-128 463.4 363 74.9
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 2.4e-124 449.5 333 77.8
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 4.4e-123 445.3 360 73.1
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 4.4e-123 445.3 332 76.5
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 5.8e-123 444.9 332 76.2
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 3.8e-122 442.2 335 75.5
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 2.4e-121 439.5 357 70.9
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 3.9e-119 432.2 335 74.6
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 1.1e-116 424.1 294 79.9
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 1.2e-104 384.0 358 66.2
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 5.7e-78 295.4 327 54.4
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 1.2e-67 261.2 328 51.8
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 4.5e-67 259.2 315 52.1
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 1.3e-66 257.7 394 45.2
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 2.9e-66 256.5 363 46.6
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 5.0e-66 255.8 181 72.9
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 2.5e-65 253.4 254 58.3
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 3.2e-65 253.1 189 70.9
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 4.2e-65 252.7 228 61.8
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 5.5e-65 252.3 254 58.3
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 7.2e-65 251.9 269 55.0
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 3.6e-64 249.6 252 57.9
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 6.1e-64 248.8 199 66.3
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.1e-64 248.8 201 64.7
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 8.0e-64 248.4 286 52.8
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 1.0e-63 248.1 233 60.1
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.4e-63 247.7 201 64.2
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 2.3e-63 246.9 211 63.5
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.3e-63 246.9 226 59.7
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 2.3e-63 246.9 347 46.1
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 2.3e-63 246.9 228 59.2
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.7e-63 245.4 201 63.7
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 8.8e-63 245.0 207 64.3
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 1.5e-62 244.2 228 58.8
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 2.6e-62 243.4 215 63.7
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 2.6e-62 243.4 188 69.7
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 3.3e-62 243.0 271 53.1
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 5.7e-62 242.3 192 67.2
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 9.7e-62 241.5 178 69.7
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 9.7e-62 241.5 182 67.6
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 1.3e-61 241.1 343 47.8
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 2.2e-61 240.4 343 46.6
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 2.8e-61 240.0 195 64.6
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 3.7e-61 239.6 282 52.8
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 4.8e-61 239.2 304 51.0
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 4.8e-61 239.2 233 57.1
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 4.8e-61 239.2 190 65.8
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 4.8e-61 239.2 232 57.3
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 8.2e-61 238.4 198 64.6
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 1.4e-60 237.7 222 59.0
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 1.8e-60 237.3 272 51.5
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 1.8e-60 237.3 190 67.9
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 2.4e-60 236.9 194 62.9
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 3.1e-60 236.5 245 52.7
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 5.3e-60 235.7 268 51.1
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 9.1e-60 235.0 231 57.6
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 9.1e-60 235.0 231 57.6
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 1.2e-59 234.6 291 50.9
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 1.2e-59 234.6 184 64.1
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 1.6e-59 234.2 167 70.7
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.6e-59 234.2 266 51.9
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 1.6e-59 234.2 220 59.5
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 1.6e-59 234.2 226 58.4
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 1.6e-59 234.2 286 50.0
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 2.0e-59 233.8 188 65.4
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 2.0e-59 233.8 283 50.9
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 2.7e-59 233.4 360 43.1
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.7e-59 233.4 372 43.3
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 2.7e-59 233.4 185 67.0
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 3.5e-59 233.0 273 49.5
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 1.0e-58 231.5 216 56.9
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 1.0e-58 231.5 177 75.7
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.0e-58 231.5 337 46.6
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 1.7e-58 230.7 221 57.9
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 3.8e-58 229.6 191 63.4
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 8.5e-58 228.4 191 62.3
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 8.5e-58 228.4 188 61.7
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 8.5e-58 228.4 251 53.4
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 8.5e-58 228.4 226 56.2
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 1.1e-57 228.0 169 69.2
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 9.4e-57 224.9 239 53.1
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 8.8e-55 218.4 191 61.3
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 4.4e-54 216.1 188 59.0
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 4.4e-54 216.1 228 53.1
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 1.7e-53 214.2 166 66.9
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 4.1e-52 209.5 185 60.5
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 5.4e-52 209.1 166 65.7
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 5.4e-52 209.1 278 47.8
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 1.2e-51 208.0 272 47.8
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 2.7e-51 206.8 219 53.4
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 4.5e-51 206.1 272 47.4
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 4.5e-51 206.1 167 63.5
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 5.9e-51 205.7 188 60.6
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 2.5e-49 200.3 240 53.3
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 4.2e-49 199.5 150 69.3
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 9.5e-49 198.4 258 45.3
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 8.9e-47 191.8 134 71.6
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 9.2e-44 181.8 325 41.5
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.0e-42 178.3 158 60.8
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 1.5e-41 174.5 171 57.3
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 1.2e-35 154.8 165 47.9
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 4.3e-33 146.4 180 48.9
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 5.6e-33 146.0 153 56.9
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 5.2e-31 139.4 116 67.2
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 3.2e-28 130.2 98 66.3
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.0e-26 125.2 102 60.8
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.0e-26 125.2 161 49.1
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.7e-26 124.4 162 48.1
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 8.6e-26 122.1 174 46.0
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 6.2e-24 115.9 174 37.4
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 6.8e-23 112.5 87 64.4
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 7.1e-20 102.4 181 33.7
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 1.6e-16 91.3 61 72.1
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 5.8e-14 82.8 147 40.1
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 4.6e-11 73.2 203 32.0
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 5.2e-07 59.7 164 30.5
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 4.4e-06 56.6 110 38.2
Eucgr.E03158 Eucalyptus grandis HOM05D006410 ORTHO05D007914 5.8e-06 56.2 53 56.6


User provided reference genes

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