Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 1.4e-47 193.0 124 100.0
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 1.2e-38 163.3 124 91.1
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 2.0e-38 162.5 124 75.8
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 2.0e-38 162.5 124 75.8
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 3.4e-38 161.8 124 77.4
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 1.3e-37 159.8 124 89.5
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 1.7e-37 159.5 124 76.6
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 2.2e-37 159.1 124 89.5
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 1.4e-36 156.4 124 73.4
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 1.4e-36 156.4 124 74.2
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 5.5e-36 154.5 124 71.8
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 1.0e-34 150.2 124 71.8
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 9.4e-28 127.1 125 63.2
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 9.4e-28 127.1 125 63.2
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 4.7e-27 124.8 125 62.4
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 8.0e-27 124.0 125 61.6
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 1.8e-26 122.9 124 58.9
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 9.7e-25 117.1 126 57.9
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 1.3e-24 116.7 127 58.3
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 6.3e-24 114.4 119 58.0
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 8.2e-24 114.0 125 58.4
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 1.1e-23 113.6 124 56.5
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 3.1e-23 112.1 120 56.7
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 1.6e-22 109.8 125 56.0
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 4.5e-22 108.2 120 54.2
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 2.2e-21 105.9 124 53.2
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 5.0e-21 104.8 120 51.7
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 5.0e-21 104.8 124 52.4
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 6.5e-21 104.4 124 52.4
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 6.5e-21 104.4 120 51.7
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 6.5e-21 104.4 120 51.7
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 6.5e-21 104.4 122 54.1
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 1.1e-20 103.6 125 55.2
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 1.1e-20 103.6 125 55.2
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 3.2e-20 102.1 120 50.8
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 4.2e-20 101.7 121 52.9
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 4.2e-20 101.7 124 50.0
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 7.2e-20 100.9 107 57.0
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 9.4e-20 100.5 124 51.6
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 9.4e-20 100.5 118 50.8
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 9.4e-20 100.5 124 50.0
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 1.2e-19 100.1 120 52.5
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 1.2e-19 100.1 122 53.3
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 1.2e-19 100.1 124 50.0
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 1.2e-19 100.1 120 51.7
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 2.1e-19 99.4 122 49.2
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 2.7e-19 99.0 108 56.5
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 3.6e-19 98.6 124 50.0
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 3.6e-19 98.6 120 53.3
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 4.7e-19 98.2 104 56.7
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 8.0e-19 97.4 125 52.8
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 8.0e-19 97.4 123 48.8
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 1.0e-18 97.1 118 51.7
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 1.4e-18 96.7 122 47.5
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 1.4e-18 96.7 125 49.6
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 1.4e-18 96.7 124 51.6
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 1.4e-18 96.7 124 50.0
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 3.0e-18 95.5 132 48.5
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 4.0e-18 95.1 123 50.4
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 6.8e-18 94.4 124 47.6
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 8.8e-18 94.0 120 46.7
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 8.8e-18 94.0 120 46.7
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 1.2e-17 93.6 124 48.4
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 2.0e-17 92.8 120 47.5
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 2.6e-17 92.4 126 49.2
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 1.7e-16 89.7 119 47.9
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 2.2e-16 89.4 123 46.3
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 3.7e-16 88.6 119 48.7
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 3.7e-16 88.6 115 43.5
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 6.3e-16 87.8 84 64.3
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 1.4e-15 86.7 124 50.0
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 1.4e-15 86.7 120 49.2
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 2.4e-15 85.9 119 46.2
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 7.0e-15 84.3 66 62.1
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 9.1e-15 84.0 113 46.9
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 1.6e-14 83.2 123 45.5
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 2.0e-14 82.8 86 64.0
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 2.0e-14 82.8 122 45.1
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 3.5e-14 82.0 115 46.1
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 4.5e-14 81.6 111 47.7
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 4.5e-14 81.6 113 46.0
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 1.3e-13 80.1 118 46.6
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 1.3e-13 80.1 121 43.0
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 3.8e-13 78.6 119 42.0
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 8.5e-13 77.4 86 51.2
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 1.1e-12 77.0 143 41.3
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 1.1e-12 77.0 124 46.8
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 1.5e-12 76.6 110 44.5
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 1.5e-12 76.6 66 57.6
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 4.2e-12 75.1 109 53.2
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 5.5e-12 74.7 120 44.2
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 1.2e-11 73.6 73 52.1
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 2.1e-11 72.8 119 45.4
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 3.6e-11 72.0 127 42.5
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 3.6e-11 72.0 118 43.2
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 6.1e-11 71.2 100 44.0
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 6.1e-11 71.2 111 42.3
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 1.0e-10 70.5 86 59.3
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 1.4e-10 70.1 112 54.5
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 1.8e-10 69.7 84 53.6
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 1.8e-10 69.7 111 41.4
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 3.0e-10 68.9 112 40.2
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 3.0e-10 68.9 128 37.5
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 4.0e-10 68.6 123 39.0
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 4.0e-10 68.6 120 40.8
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 4.4e-09 65.1 78 55.1
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 5.7e-09 64.7 115 40.9
Prupe.6G274500 Prunus persica HOM05D007113 ORTHO05D008859 2.2e-08 62.8 80 50.0
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.1e-07 60.5 78 53.8
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 1.8e-07 59.7 105 38.1
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 9.2e-07 57.4 112 40.2


User provided reference genes

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