Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 4.1e-237 824.3 415 100.0
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 1.5e-223 779.2 416 91.1
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 9.9e-223 776.5 416 90.6
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 1.4e-221 772.7 416 91.1
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 7.3e-218 760.4 410 90.5
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 6.9e-216 753.8 416 88.9
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 3.4e-215 751.5 417 88.5
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 1.2e-212 743.0 418 86.6
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 1.0e-211 740.0 416 87.5
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 1.5e-210 736.1 415 86.0
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 6.2e-209 730.7 417 85.9
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 1.1e-208 729.9 420 86.0
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 9.0e-208 726.9 416 86.1
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 5.1e-203 711.1 394 89.3
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 8.2e-193 677.2 416 76.9
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 2.2e-161 572.8 425 66.8
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 6.3e-161 571.2 426 63.8
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 1.1e-160 570.5 425 66.4
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 1.8e-160 569.7 429 65.0
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 3.1e-160 568.9 427 67.7
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.0e-159 566.2 427 64.4
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 4.5e-159 565.1 425 66.4
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 5.9e-159 564.7 429 65.0
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 5.9e-159 564.7 427 65.6
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 7.7e-159 564.3 412 67.2
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 7.7e-159 564.3 428 63.6
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 1.3e-158 563.5 429 64.6
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 5.0e-158 561.6 430 64.7
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 6.5e-158 561.2 428 62.1
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 8.5e-158 560.8 423 62.4
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 1.9e-157 559.7 427 65.6
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 1.9e-157 559.7 433 64.2
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 5.5e-157 558.1 431 61.9
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 7.2e-157 557.8 419 62.1
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 7.2e-157 557.8 432 63.9
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 1.2e-156 557.0 430 65.8
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 1.2e-156 557.0 432 65.3
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 2.1e-156 556.2 430 64.7
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 8.0e-156 554.3 428 65.0
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 1.0e-155 553.9 428 65.4
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 1.8e-155 553.1 428 65.0
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 4.0e-155 552.0 427 65.1
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 5.2e-155 551.6 427 64.9
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 6.8e-155 551.2 425 63.8
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 8.8e-155 550.8 427 64.9
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 8.8e-155 550.8 430 63.0
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 1.5e-154 550.1 433 63.3
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 4.4e-154 548.5 427 64.6
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 7.5e-154 547.7 431 63.3
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 4.8e-153 545.0 424 64.4
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 6.3e-153 544.7 428 62.1
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 6.3e-153 544.7 427 63.2
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 8.3e-153 544.3 427 64.4
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 8.3e-153 544.3 422 65.2
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 2.4e-152 542.7 432 62.7
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 3.1e-152 542.3 427 64.4
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 4.1e-152 542.0 434 62.4
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 4.1e-152 542.0 425 61.2
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 1.2e-151 540.4 424 64.4
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 1.2e-151 540.4 432 62.3
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 4.5e-151 538.5 427 63.7
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 5.9e-151 538.1 416 63.2
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 5.9e-151 538.1 427 63.2
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 7.7e-151 537.7 429 62.7
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 1.3e-150 537.0 428 62.9
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 1.3e-150 537.0 428 63.1
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 5.0e-150 535.0 427 63.7
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 6.5e-150 534.6 443 58.9
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 1.9e-149 533.1 423 63.6
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 2.7e-148 529.3 424 62.0
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 1.8e-147 526.6 404 65.6
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 1.8e-147 526.6 423 60.0
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 1.5e-146 523.5 447 61.1
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 2.0e-146 523.1 427 60.7
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 5.7e-146 521.5 424 62.5
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 1.2e-143 513.8 423 59.3
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 1.6e-143 513.5 435 60.2
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 3.5e-143 512.3 342 70.8
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 7.7e-143 511.1 428 60.5
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 3.8e-142 508.8 426 58.0
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 8.6e-142 507.7 424 58.3
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 5.6e-141 505.0 434 57.4
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 4.0e-139 498.8 389 64.0
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 2.0e-138 496.5 405 62.5
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 2.4e-136 489.6 329 69.9
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 7.8e-135 484.6 408 61.3
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 2.0e-130 469.9 418 57.4
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 2.2e-129 466.5 421 58.0
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 5.4e-128 461.8 396 58.1
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 2.0e-127 459.9 454 51.5
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 2.7e-127 459.5 432 56.0
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 1.7e-126 456.8 403 57.6
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 1.9e-125 453.4 383 61.9
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 7.3e-125 451.4 410 56.8
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 2.1e-124 449.9 409 58.4
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 1.5e-122 443.7 367 59.1
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 1.6e-119 433.7 425 49.4
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.1e-117 427.6 423 53.4
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 1.1e-117 427.6 326 66.0
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 4.4e-114 415.6 418 54.8
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 1.5e-109 400.6 218 87.2
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 3.1e-107 392.9 264 72.3
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 1.0e-94 351.3 421 45.8
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 6.7e-94 348.6 370 50.3
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 3.0e-86 323.2 304 57.2
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 1.5e-85 320.9 336 48.5
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 2.8e-84 316.6 323 49.5
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 5.8e-82 308.9 320 52.5
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 6.9e-75 285.4 379 44.9
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 1.8e-62 244.2 301 41.9
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 9.7e-61 238.4 223 58.7
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.9e-57 226.9 196 56.6
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 2.6e-53 213.8 130 74.6
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 8.0e-47 192.2 135 60.0
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.0e-42 177.6 167 51.5
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 1.8e-35 154.5 155 52.3
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 7.2e-32 142.5 94 67.0
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 1.4e-27 128.3 82 75.6
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 4.1e-27 126.7 123 53.7
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 2.0e-26 124.4 92 75.0
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 4.5e-26 123.2 123 52.8
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 1.7e-25 121.3 134 49.3
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 4.4e-21 106.7 92 57.6
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 2.1e-15 87.8 67 62.7
TPR.G34865 Trifolium pratense HOM05D006079 ORTHO05D008156 6.0e-10 69.7 123 38.2


User provided reference genes

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