Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 2.1e-65 252.3 134 100.0
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 2.4e-61 238.8 134 92.5
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 3.2e-58 228.4 134 88.1
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 3.2e-58 228.4 134 88.1
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 5.5e-58 227.6 134 88.1
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 9.4e-58 226.9 134 87.3
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 2.7e-57 225.3 134 86.6
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 8.0e-57 223.8 134 88.1
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 2.3e-56 222.2 135 86.7
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 2.4e-53 212.2 134 85.1
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 1.6e-52 209.5 129 85.3
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 1.7e-43 179.5 133 71.4
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 1.1e-42 176.8 127 72.4
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 1.2e-33 146.7 128 61.7
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 3.6e-33 145.2 129 61.2
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 6.2e-33 144.4 126 62.7
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 1.8e-32 142.9 126 57.9
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 2.3e-32 142.5 129 60.5
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 3.1e-32 142.1 125 60.0
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 3.1e-32 142.1 126 57.1
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 8.9e-32 140.6 121 62.0
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 1.5e-31 139.8 128 57.8
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 2.6e-31 139.0 124 61.3
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 4.4e-31 138.3 129 61.2
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 1.3e-30 136.7 120 58.3
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 2.2e-30 136.0 128 58.6
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 2.9e-30 135.6 125 57.6
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 4.9e-30 134.8 128 60.2
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 6.4e-30 134.4 127 56.7
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 8.3e-30 134.0 143 51.7
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 1.1e-29 133.7 128 57.0
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.1e-29 133.7 123 58.5
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 1.4e-29 133.3 127 53.5
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 1.4e-29 133.3 130 54.6
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 2.4e-29 132.5 125 58.4
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 3.2e-29 132.1 126 54.8
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 3.2e-29 132.1 127 52.0
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 3.2e-29 132.1 128 57.8
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 4.1e-29 131.7 124 55.6
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 5.4e-29 131.3 127 52.8
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 5.4e-29 131.3 124 57.3
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 5.4e-29 131.3 135 56.3
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 9.2e-29 130.6 111 63.1
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 1.6e-28 129.8 127 57.5
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 1.6e-28 129.8 127 55.9
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 2.0e-28 129.4 130 53.8
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 2.0e-28 129.4 137 51.8
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 2.7e-28 129.0 127 53.5
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 3.5e-28 128.6 126 53.2
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 3.5e-28 128.6 135 52.6
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 3.5e-28 128.6 127 52.8
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 4.6e-28 128.3 145 53.1
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 6.0e-28 127.9 130 53.8
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 7.8e-28 127.5 123 57.7
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 1.0e-27 127.1 128 57.0
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 1.0e-27 127.1 127 53.5
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 1.3e-27 126.7 135 51.9
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 1.7e-27 126.3 126 57.1
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 2.3e-27 125.9 129 52.7
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 2.3e-27 125.9 125 51.2
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 2.3e-27 125.9 127 51.2
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 3.9e-27 125.2 124 52.4
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 3.9e-27 125.2 127 51.2
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 3.9e-27 125.2 127 51.2
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 5.0e-27 124.8 126 51.6
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 6.6e-27 124.4 127 52.0
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 8.6e-27 124.0 120 52.5
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 8.6e-27 124.0 127 51.2
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 1.1e-26 123.6 128 50.0
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 1.1e-26 123.6 127 50.4
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.9e-26 122.9 124 56.5
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 1.9e-26 122.9 130 53.1
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 2.5e-26 122.5 140 52.1
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 3.3e-26 122.1 124 53.2
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 3.3e-26 122.1 126 50.8
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 4.3e-26 121.7 129 51.9
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 5.6e-26 121.3 127 52.8
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 9.5e-26 120.6 127 49.6
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 9.5e-26 120.6 126 53.2
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 1.6e-25 119.8 125 50.4
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 2.8e-25 119.0 127 50.4
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 2.8e-25 119.0 127 49.6
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 3.6e-25 118.6 127 48.0
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 4.7e-25 118.2 127 50.4
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 8.1e-25 117.5 128 50.0
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 3.1e-24 115.5 161 44.7
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 4.0e-24 115.2 122 51.6
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 5.2e-24 114.8 122 50.8
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 5.2e-24 114.8 122 50.8
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 6.8e-24 114.4 125 49.6
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 6.8e-24 114.4 125 49.6
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 6.8e-24 114.4 125 49.6
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 1.2e-23 113.6 102 64.7
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 1.2e-23 113.6 102 64.7
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 1.5e-23 113.2 112 52.7
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 2.6e-23 112.5 98 62.2
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 3.4e-23 112.1 128 49.2
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 2.2e-22 109.4 122 47.5
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 4.9e-22 108.2 159 41.5
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 6.4e-22 107.8 99 56.6
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 1.2e-20 103.6 79 67.1
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 2.1e-20 102.8 96 63.5
C02p04540 Brassica napus HOM05D006467 ORTHO05D008012 3.5e-20 102.1 96 63.5
BolC1t01590H Brassica oleracea HOM05D006467 ORTHO05D008012 1.3e-19 100.1 96 62.5
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 1.3e-19 100.1 76 60.5
C06p12980 Brassica napus HOM05D006467 ORTHO05D008012 2.3e-19 99.4 90 65.6
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 8.6e-19 97.4 84 58.3
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 3.6e-17 92.0 117 45.3
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 4.7e-17 91.7 77 54.5
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 4.7e-17 91.7 76 59.2
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 4.7e-17 91.7 117 44.4
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 3.4e-15 85.5 101 42.6
BcaC08g43911 Brassica carinata HOM05D006467 ORTHO05D008012 2.9e-14 82.4 49 85.7
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 3.2e-13 79.0 121 39.7
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 2.1e-12 76.3 121 38.0
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 6.0e-12 74.7 116 38.8
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 1.0e-11 73.9 112 46.4
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 9.6e-10 67.4 108 38.0
FvH4_1g28030 Fragaria vesca HOM05D000871 ORTHO05D008012 8.1e-09 64.3 92 47.8
BolC2t06414H Brassica oleracea HOM05D033078 ORTHO05D041034 7.6e-07 57.8 66 54.5
A06p31240 Brassica napus HOM05D033078 ORTHO05D041034 1.7e-06 56.6 66 53.0


User provided reference genes

Program Settings