Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 1.4e-121 439.9 257 100.0
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 5.4e-102 374.8 255 77.6
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 2.9e-100 369.0 255 86.7
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 1.5e-99 366.7 257 76.7
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 2.5e-99 365.9 252 77.4
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 3.3e-99 365.5 256 76.2
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 2.3e-97 359.4 257 80.5
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 3.0e-97 359.0 257 75.5
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 1.2e-96 357.1 255 76.1
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 1.8e-94 349.7 257 75.1
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 1.5e-91 340.1 257 73.5
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 3.3e-91 339.0 257 77.0
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 3.6e-82 308.9 258 68.6
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 4.0e-81 305.4 258 64.7
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 1.4e-78 297.0 262 60.7
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 2.7e-77 292.7 178 80.9
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 6.0e-77 291.6 199 72.4
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 6.0e-77 291.6 249 62.7
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 6.0e-77 291.6 255 62.7
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 1.0e-76 290.8 199 73.4
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 2.3e-76 289.7 194 75.3
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 2.3e-76 289.7 197 74.6
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 5.1e-76 288.5 250 62.8
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 5.1e-76 288.5 190 76.8
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 6.6e-76 288.1 206 68.4
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 1.5e-75 287.0 190 74.2
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 1.9e-75 286.6 190 75.3
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 2.5e-75 286.2 179 78.2
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 3.3e-75 285.8 219 67.6
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 4.3e-75 285.4 192 74.5
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 5.6e-75 285.0 254 59.8
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 7.3e-75 284.6 218 68.8
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 9.5e-75 284.3 275 60.0
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 1.2e-74 283.9 206 68.0
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 1.2e-74 283.9 191 74.9
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 1.2e-74 283.9 265 60.4
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 1.6e-74 283.5 176 77.8
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 2.1e-74 283.1 186 75.8
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 3.6e-74 282.3 186 74.7
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 4.7e-74 282.0 211 70.1
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 1.1e-73 280.8 176 77.3
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 1.1e-73 280.8 257 58.8
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 1.4e-73 280.4 257 58.0
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 1.8e-73 280.0 199 71.4
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 1.8e-73 280.0 199 71.4
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 3.1e-73 279.3 179 77.7
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 3.1e-73 279.3 190 74.7
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 4.0e-73 278.9 189 74.1
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 1.2e-72 277.3 178 75.8
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 1.5e-72 276.9 208 68.3
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 2.6e-72 276.2 179 77.1
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 2.6e-72 276.2 187 72.2
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 3.4e-72 275.8 178 75.3
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 7.6e-72 274.6 220 65.5
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 9.9e-72 274.2 180 73.9
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 9.9e-72 274.2 256 58.6
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 1.3e-71 273.9 192 73.4
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 1.3e-71 273.9 195 71.8
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 1.3e-71 273.9 207 67.1
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 8.4e-71 271.2 187 70.1
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 1.4e-70 270.4 262 58.4
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 1.2e-69 267.3 180 73.9
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 1.6e-69 266.9 193 69.4
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 2.7e-69 266.2 209 66.5
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 3.5e-69 265.8 180 73.3
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 6.0e-69 265.0 176 73.3
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 6.0e-69 265.0 187 70.1
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 1.0e-68 264.2 196 66.8
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 1.3e-68 263.8 188 71.3
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 6.6e-68 261.5 180 71.7
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 6.6e-68 261.5 188 70.7
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 4.3e-67 258.8 259 56.0
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 4.7e-66 255.4 189 68.8
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 1.1e-65 254.2 176 71.0
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 1.4e-65 253.8 259 57.9
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 2.4e-65 253.1 191 68.6
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 5.8e-64 248.4 142 83.1
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 7.6e-64 248.1 197 62.9
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 9.9e-64 247.7 186 66.1
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 1.9e-62 243.4 156 75.6
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 7.3e-59 231.5 186 62.9
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 2.1e-58 229.9 184 62.5
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 5.3e-57 225.3 180 64.4
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 9.0e-57 224.6 180 61.7
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 2.6e-56 223.0 192 61.5
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 3.8e-55 219.2 189 60.3
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 1.1e-54 217.6 186 61.8
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 1.4e-54 217.2 176 63.6
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 3.2e-54 216.1 132 78.8
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 6.0e-53 211.8 136 77.9
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 2.4e-49 199.9 125 79.2
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 4.9e-47 192.2 137 67.2
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 5.6e-43 178.7 180 52.8
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 7.4e-43 178.3 176 55.7
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 8.2e-42 174.9 106 77.4
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 3.1e-33 146.4 84 81.0
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 8.7e-28 128.3 75 80.0
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 4.8e-26 122.5 127 56.7
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 6.9e-25 118.6 65 86.2
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 5.7e-19 99.0 56 83.9
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 1.1e-09 68.2 66 54.5


User provided reference genes

Program Settings