Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g18530 Schrenkiella parvula HOM05D005679 ORTHO05D007228 1.3e-174 616.3 312 100.0
A03p20010 Brassica napus HOM05D005679 ORTHO05D007228 9.9e-151 537.0 314 86.9
BraA03t11252Z Brassica rapa HOM05D005679 ORTHO05D007228 9.9e-151 537.0 314 86.9
C03p23450 Brassica napus HOM05D005679 ORTHO05D007228 1.9e-149 532.7 314 86.6
AL4G32420 Arabidopsis lyrata HOM05D005679 ORTHO05D007228 7.9e-148 527.3 312 83.7
AT2G36305 Arabidopsis thaliana HOM05D005679 ORTHO05D007228 7.9e-148 527.3 312 83.0
Thhalv10016950m.g Eutrema salsugineum HOM05D005679 ORTHO05D007228 1.7e-147 526.2 311 84.2
BcaC01g05669 Brassica carinata HOM05D005679 ORTHO05D007228 3.0e-147 525.4 314 86.0
BolC3t14741H Brassica oleracea HOM05D005679 ORTHO05D007228 3.9e-147 525.0 314 86.0
BcaB01g03852 Brassica carinata HOM05D005679 ORTHO05D007228 3.1e-144 515.4 314 84.1
Carub.0004s1806 Capsella rubella HOM05D005679 ORTHO05D007228 2.0e-143 512.7 313 82.1
Aa31LG5G21440 Aethionema arabicum HOM05D005679 ORTHO05D007228 3.9e-139 498.4 312 79.8
THA.LOC104807091 Tarenaya hassleriana HOM05D005679 ORTHO05D007228 1.5e-119 433.3 303 69.6
COL.COLO4_29768 Corchorus olitorius HOM05D005679 ORTHO05D007228 9.1e-112 407.5 312 64.1
Gohir.D04G100800 Gossypium hirsutum HOM05D005679 ORTHO05D007228 2.2e-110 402.9 311 64.6
Gorai.009G404000 Gossypium raimondii HOM05D005679 ORTHO05D007228 8.5e-110 401.0 311 64.3
Thecc.05G087100 Theobroma cacao HOM05D005679 ORTHO05D007228 1.9e-109 399.8 314 63.4
Duzib093G1300 Durio zibethinus HOM05D005679 ORTHO05D007228 3.2e-109 399.1 308 64.6
GSVIVG01033827001 Vitis vinifera HOM05D005679 ORTHO05D007228 6.1e-108 394.8 315 61.6
Hma1.2p1_0536F.1_g174040 Hydrangea macrophylla HOM05D005679 ORTHO05D007228 1.4e-107 393.7 308 64.6
Atru.chr8.1566 Acer truncatum HOM05D005679 ORTHO05D007228 3.9e-107 392.1 304 65.5
CiPaw.09G012600 Carya illinoinensis HOM05D005679 ORTHO05D007228 3.9e-107 392.1 312 63.5
Gohir.A04G063700 Gossypium hirsutum HOM05D005679 ORTHO05D007228 1.1e-106 390.6 311 62.7
Eucgr.A01508 Eucalyptus grandis HOM05D005679 ORTHO05D007228 3.3e-106 389.0 309 63.1
PGR004G0569 Punica granatum HOM05D005679 ORTHO05D007228 5.7e-106 388.3 314 60.8
Actinidia05440 Actinidia chinensis HOM05D005679 ORTHO05D007228 1.7e-105 386.7 312 64.1
Ciclev10012247m.g Citrus clementina HOM05D005679 ORTHO05D007228 1.7e-105 386.7 307 63.5
Rhsim03G0076400 Rhododendron simsii HOM05D005679 ORTHO05D007228 6.3e-105 384.8 310 62.9
CsaV3_3G037160 Cucumis sativus L. HOM05D005679 ORTHO05D007228 1.8e-104 383.3 314 61.1
arahy.Tifrunner.gnm1.ann1.J82H2E Arachis hypogaea HOM05D005679 ORTHO05D007228 3.1e-104 382.5 305 61.3
CANSAT80G1368 Cannabis sativa HOM05D005679 ORTHO05D007228 3.1e-104 382.5 310 61.0
ClCG10G019090 Citrullus lanatus HOM05D005679 ORTHO05D007228 1.6e-103 380.2 315 61.9
arahy.Tifrunner.gnm1.ann1.5KE53F Arachis hypogaea HOM05D005679 ORTHO05D007228 2.0e-103 379.8 305 61.3
MELO3C009462.2 Cucumis melo HOM05D005679 ORTHO05D007228 2.6e-103 379.4 314 60.8
TAR633G0672 Trochodendron aralioides HOM05D005679 ORTHO05D007228 2.6e-103 379.4 315 60.0
Potri.006G083300 Populus trichocarpa HOM05D005679 ORTHO05D007228 3.5e-103 379.0 307 62.9
Medtr1g060300 Medicago truncatula HOM05D005679 ORTHO05D007228 1.7e-102 376.7 312 58.3
Glyma.13G153052 Glycine max HOM05D005679 ORTHO05D007228 2.9e-102 375.9 304 60.5
TPR.G31118 Trifolium pratense HOM05D005679 ORTHO05D007228 1.5e-101 373.6 313 57.5
Sabra06G0062900 Salix brachista HOM05D005679 ORTHO05D007228 1.9e-101 373.2 303 61.7
Psat6g080840 Pisum sativum HOM05D005679 ORTHO05D007228 3.2e-101 372.5 312 57.4
Dinv21221 Davidia involucrata HOM05D005679 ORTHO05D007228 5.5e-101 371.7 309 61.2
vmacro07401 Vaccinium macrocarpon HOM05D005679 ORTHO05D007228 9.4e-101 370.9 334 57.5
Lj5g0006681 Lotus japonicus HOM05D005679 ORTHO05D007228 6.1e-100 368.2 305 61.0
MD12G1023600 Malus domestica HOM05D005679 ORTHO05D007228 1.8e-99 366.7 307 60.3
MD14G1020800 Malus domestica HOM05D005679 ORTHO05D007228 5.2e-99 365.2 307 59.9
Phvul.007G229100 Phaseolus vulgaris HOM05D005679 ORTHO05D007228 6.7e-99 364.8 312 58.3
RcHm_v2.0_Chr3g0472981 Rosa chinensis HOM05D005679 ORTHO05D007228 1.2e-98 364.0 311 60.1
VMungo0720G0655 Vigna mungo HOM05D005679 ORTHO05D007228 1.2e-98 364.0 301 58.8
Migut.J01051 Erythranthe guttata HOM05D005679 ORTHO05D007228 2.0e-98 363.2 307 58.6
Lalb_Chr21g0315771 Lupinus albus HOM05D005679 ORTHO05D007228 1.3e-97 360.5 303 59.1
HanXRQChr10g0313901 Helianthus annuus HOM05D005679 ORTHO05D007228 2.2e-97 359.8 312 56.1
Manes.09G056451 Manihot esculenta HOM05D005679 ORTHO05D007228 3.7e-97 359.0 307 59.6
Sopen09g004390 Solanum pennellii HOM05D005679 ORTHO05D007228 4.8e-97 358.6 310 59.4
Solyc09g009630.3 Solanum lycopersicum HOM05D005679 ORTHO05D007228 1.8e-96 356.7 310 59.0
FAN05G0675 Fragaria x ananassa HOM05D005679 ORTHO05D007228 2.4e-96 356.3 311 59.2
FAN14G3109 Fragaria x ananassa HOM05D005679 ORTHO05D007228 2.4e-96 356.3 309 59.5
Nn6g34939 Nelumbo nucifera HOM05D005679 ORTHO05D007228 3.1e-96 355.9 328 57.3
Peaxi162Scf00040g01117 Petunia axillaris HOM05D005679 ORTHO05D007228 3.1e-96 355.9 307 59.6
PGSC0003DMG401002654 Solanum tuberosum HOM05D005679 ORTHO05D007228 4.1e-96 355.5 311 59.5
FvH4_6g18450 Fragaria vesca HOM05D005679 ORTHO05D007228 7.0e-96 354.8 309 59.2
MSTRG.5837 Avicennia marina HOM05D005679 ORTHO05D007228 3.5e-95 352.4 310 58.4
Lsat_1_v5_gn_1_48041 Lactuca sativa HOM05D005679 ORTHO05D007228 7.7e-95 351.3 308 56.5
Oeu047193.1 Olea europaea HOM05D005679 ORTHO05D007228 1.0e-94 350.9 308 57.8
Aqoxy4G02804 Aquilegia oxysepala HOM05D005679 ORTHO05D007228 6.5e-94 348.2 305 56.7
HanXRQChr13g0424691 Helianthus annuus HOM05D005679 ORTHO05D007228 8.5e-94 347.8 295 56.9
SGA_v2.0_scaffold13G06736 Striga asiatica HOM05D005679 ORTHO05D007228 1.5e-93 347.1 294 57.5
Cc06_g05640 Coffea canephora HOM05D005679 ORTHO05D007228 4.7e-92 342.0 310 56.8
HanXRQChr11g0340241 Helianthus annuus HOM05D005679 ORTHO05D007228 5.2e-91 338.6 310 55.5
FAN02G2684 Fragaria x ananassa HOM05D005679 ORTHO05D007228 2.6e-90 336.3 320 55.9
PSO339G3946 Papaver somniferum HOM05D005679 ORTHO05D007228 2.2e-89 333.2 312 56.4
TWI77G0106 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 8.3e-89 331.3 280 61.8
PSO384G2019 Papaver somniferum HOM05D005679 ORTHO05D007228 3.1e-88 329.3 303 55.1
Sc02g0000910 Simmondsia chinensis HOM05D005679 ORTHO05D007228 3.1e-88 329.3 295 55.6
SHI23954 Sapria himalayana HOM05D005679 ORTHO05D007228 1.6e-87 327.0 307 54.7
Glyma.10G071200 Glycine max HOM05D005679 ORTHO05D007228 2.7e-87 326.2 303 54.1
QL07p039311 Quercus lobata HOM05D005679 ORTHO05D007228 9.5e-85 317.8 268 63.4
TWI53G0317 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 1.7e-81 307.0 288 58.7
CSS0002811 Camellia sinensis var. sinensis HOM05D005679 ORTHO05D007228 2.8e-81 306.2 232 65.5
Haze_19592 Corylus avellana HOM05D005679 ORTHO05D007228 4.9e-81 305.4 272 61.8
FAN05G4213 Fragaria x ananassa HOM05D005679 ORTHO05D007228 7.0e-80 301.6 267 59.6
Nitab4.5_0001725g0030 Nicotiana tabacum HOM05D005679 ORTHO05D007228 9.2e-80 301.2 315 53.0
CARHR130580 Cardamine hirsuta HOM05D005679 ORTHO05D007228 1.7e-78 297.0 196 79.6
HPP92_006355 Vanilla planifolia HOM05D005679 ORTHO05D007228 5.0e-78 295.4 316 50.6
Ah.08g210640 Amaranthus hybridus HOM05D005679 ORTHO05D007228 1.1e-77 294.3 308 51.0
EL10Ac7g16934 Beta vulgaris HOM05D005679 ORTHO05D007228 1.1e-77 294.3 308 51.3
ECA248G1272 Erigeron canadensis HOM05D005679 ORTHO05D007228 1.8e-75 287.0 256 57.0
ATR0568G150 Amborella trichopoda HOM05D005679 ORTHO05D007228 8.9e-75 284.6 267 59.6
Nitab4.5_0002400g0100 Nicotiana tabacum HOM05D005679 ORTHO05D007228 8.9e-75 284.6 325 50.2
HanXRQChr10g0313981 Helianthus annuus HOM05D005679 ORTHO05D007228 3.2e-72 276.2 259 51.4
Prupe.7G112900 Prunus persica HOM05D005679 ORTHO05D007228 7.0e-72 275.0 224 61.2
Ca_26654_v3 Cicer arietinum L. HOM05D005679 ORTHO05D007228 2.7e-71 273.1 244 56.6
Sed0004661 Sechium edule HOM05D005679 ORTHO05D007228 2.7e-71 273.1 245 61.2
unitig_749.g14296 Utricularia gibba HOM05D005679 ORTHO05D007228 3.9e-70 269.2 270 55.2
CAN.G397.28 Capsicum annuum HOM05D005679 ORTHO05D007228 4.3e-69 265.8 224 58.9
TAR636G2700 Trochodendron aralioides HOM05D005679 ORTHO05D007228 1.7e-65 253.8 283 50.5
HanXRQChr10g0314031 Helianthus annuus HOM05D005679 ORTHO05D007228 2.4e-64 250.0 211 55.9
Mapoly0066s0044 Marchantia polymorpha HOM05D005679 ORTHO05D007228 2.3e-62 243.4 308 44.2
Os05g0357700 Oryza sativa ssp. japonica HOM05D005679 ORTHO05D007228 2.6e-58 229.9 222 54.5
Zm00001eb285910 Zea mays HOM05D005679 ORTHO05D007228 4.4e-58 229.2 310 44.5
AUR62028550 Chenopodium quinoa HOM05D005679 ORTHO05D007228 2.3e-54 216.9 184 56.0
Pp3c4_17190 Physcomitrium patens HOM05D005679 ORTHO05D007228 5.1e-54 215.7 305 42.0
HanXRQChr10g0314011 Helianthus annuus HOM05D005679 ORTHO05D007228 6.2e-52 208.8 177 55.9
Lj9A526G37 Lonicera japonica HOM05D005679 ORTHO05D007228 2.3e-51 206.8 301 41.9
SMO203G0038 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 4.0e-51 206.1 319 39.5
SMO327G0022 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 2.7e-47 193.4 298 39.3
SEGI_36814 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 2.8e-44 183.3 225 45.3
AUR62033502 Chenopodium quinoa HOM05D005679 ORTHO05D007228 4.0e-43 179.5 177 52.0
Sed0012745 Sechium edule HOM05D005679 ORTHO05D007228 3.4e-42 176.4 214 46.7
AagrBONN_evm.TU.Sc2ySwM_228.1072 Anthoceros agrestis HOM05D005679 ORTHO05D007228 1.3e-38 164.5 163 50.3
CDE02G3258 Ceratophyllum demersum HOM05D005679 ORTHO05D007228 1.4e-35 154.5 107 68.2
CBR_g961 Chara braunii HOM05D005679 ORTHO05D007228 5.8e-34 149.1 318 32.4
Lj2A135T55 Lonicera japonica HOM05D005679 ORTHO05D007228 2.9e-33 146.7 163 49.7
HanXRQChr10g0313891 Helianthus annuus HOM05D005679 ORTHO05D007228 4.9e-33 146.0 152 52.0
SalBow3G2040 Salvia bowleyana HOM05D005679 ORTHO05D007228 1.3e-30 137.9 157 47.8
AUR62028549 Chenopodium quinoa HOM05D005679 ORTHO05D007228 4.8e-28 129.4 165 42.4
Dinv31674 Davidia involucrata HOM05D005679 ORTHO05D007228 1.1e-27 128.3 253 38.3
AUR62033501 Chenopodium quinoa HOM05D005679 ORTHO05D007228 6.4e-25 119.0 178 41.0
Lsat_1_v5_gn_1_48021 Lactuca sativa HOM05D005679 ORTHO05D007228 8.4e-25 118.6 86 60.5
Cre01.g042150 Chlamydomonas reinhardtii HOM05D005679 ORTHO05D007228 1.4e-24 117.9 147 43.5
MCO10G317 Micromonas commoda HOM05D005679 ORTHO05D007228 9.3e-24 115.2 145 42.1
Lj2A135G55 Lonicera japonica HOM05D005679 ORTHO05D007228 4.6e-23 112.8 75 62.7
Gorai.006G155900 Gossypium raimondii HOM05D005679 ORTHO05D007228 1.8e-19 100.9 72 66.7
Gohir.D09G135950 Gossypium hirsutum HOM05D005679 ORTHO05D007228 5.3e-19 99.4 72 65.3
DCAR_009157 Daucus carota HOM05D005679 ORTHO05D007228 1.1e-16 91.7 118 40.7
SEGI_00479 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 3.3e-13 80.1 70 48.6
Actinidia14313 Actinidia chinensis HOM05D005679 ORTHO05D007228 9.7e-13 78.6 194 36.1
HanXRQChr10g0313971 Helianthus annuus HOM05D005679 ORTHO05D007228 2.2e-12 77.4 106 42.5
PRCOL_00001551 Prasinoderma coloniale HOM05D005679 ORTHO05D007228 6.9e-11 72.4 174 35.1
arahy.Tifrunner.gnm1.ann1.7P1BGF Arachis hypogaea HOM05D005679 ORTHO05D003748 1.6e-07 61.2 37 75.7


User provided reference genes

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