Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 4.4e-200 701.0 344 100.0
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 1.0e-185 653.3 345 91.9
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 2.2e-183 645.6 346 91.6
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 2.2e-183 645.6 346 91.0
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 6.3e-183 644.0 344 91.0
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 3.2e-182 641.7 344 91.0
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 3.2e-182 641.7 346 90.5
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 3.9e-180 634.8 340 91.2
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 8.6e-180 633.6 341 90.3
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 1.9e-179 632.5 344 89.5
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 4.0e-177 624.8 347 89.0
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 2.2e-175 619.0 348 87.9
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 1.3e-164 583.2 361 81.2
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 4.4e-144 515.0 324 77.8
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 2.9e-135 485.7 345 68.4
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 1.9e-134 483.0 326 69.9
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 3.2e-134 482.3 308 73.4
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 5.4e-134 481.5 291 77.0
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 3.5e-133 478.8 342 69.0
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 4.6e-133 478.4 308 73.7
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 1.3e-132 476.9 308 72.4
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.3e-132 476.1 342 68.7
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.3e-132 476.1 342 68.4
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 6.7e-132 474.6 302 73.2
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 3.3e-131 472.2 295 74.6
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 3.3e-131 472.2 325 70.5
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 3.3e-131 472.2 342 69.6
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 7.4e-131 471.1 344 67.2
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 9.6e-131 470.7 302 73.8
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 2.8e-130 469.2 334 69.2
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 8.1e-130 467.6 304 73.4
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 8.1e-130 467.6 341 66.9
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 8.1e-130 467.6 289 75.4
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 1.1e-129 467.2 305 73.1
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 1.1e-129 467.2 325 69.5
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 3.1e-129 465.7 309 72.2
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 4.0e-129 465.3 314 72.3
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 5.3e-129 464.9 285 76.5
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 9.0e-129 464.2 342 67.3
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 1.2e-128 463.8 325 68.6
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 2.0e-128 463.0 342 65.5
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 2.6e-128 462.6 291 73.9
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 2.6e-128 462.6 301 71.4
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 3.4e-128 462.2 290 74.5
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 4.5e-128 461.8 305 72.5
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 4.5e-128 461.8 301 71.8
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 4.5e-128 461.8 284 74.3
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 5.8e-128 461.5 311 68.5
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 2.9e-127 459.1 341 65.7
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 3.8e-127 458.8 350 66.0
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 1.1e-126 457.2 285 71.9
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 1.9e-126 456.4 285 71.9
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 2.5e-126 456.1 285 71.9
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 3.2e-126 455.7 335 67.2
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 7.1e-126 454.5 323 69.3
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 9.3e-126 454.1 350 64.6
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 2.1e-125 453.0 307 68.7
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 2.1e-125 453.0 290 73.1
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 3.5e-125 452.2 342 65.5
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 7.9e-125 451.1 332 64.5
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 1.3e-124 450.3 310 67.4
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 1.3e-124 450.3 331 65.3
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 2.3e-124 449.5 312 68.6
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 2.3e-124 449.5 339 64.9
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 2.3e-124 449.5 287 74.2
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 3.9e-124 448.7 306 69.6
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 1.5e-123 446.8 340 64.4
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 1.9e-123 446.4 297 69.7
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 1.9e-123 446.4 297 69.7
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 2.5e-123 446.0 341 65.1
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 2.8e-122 442.6 284 73.2
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 8.2e-122 441.0 302 70.2
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 8.2e-122 441.0 288 71.9
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 1.1e-121 440.7 266 76.3
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 1.5e-120 436.8 291 68.0
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 1.5e-120 436.8 293 67.9
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 4.5e-120 435.3 286 69.2
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 4.3e-115 418.7 341 61.6
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 2.2e-114 416.4 351 59.8
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 1.4e-113 413.7 298 64.8
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 2.4e-113 412.9 294 65.0
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 1.7e-111 406.8 245 76.3
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 2.9e-111 406.0 299 60.2
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 2.9e-111 406.0 248 74.2
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 1.9e-110 403.3 356 57.3
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 7.2e-110 401.4 284 66.5
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 5.1e-108 395.2 282 63.5
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 6.3e-106 388.3 309 62.8
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 5.3e-105 385.2 249 72.3
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 2.6e-104 382.9 244 70.5
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 3.4e-104 382.5 244 73.8
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 1.4e-102 377.1 287 59.2
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 3.6e-101 372.5 288 62.2
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 1.7e-98 363.6 289 60.2
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 8.5e-95 351.3 283 55.8
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 1.8e-89 333.6 214 72.4
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 7.2e-78 295.0 195 70.3
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 2.6e-75 286.6 292 50.0
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 2.5e-62 243.4 170 68.2
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 1.3e-55 221.1 144 72.2
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.4e-49 200.3 110 80.0
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 8.6e-47 191.8 114 73.7
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 2.2e-42 177.2 285 37.2
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 1.4e-41 174.5 105 80.0
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 5.4e-41 172.6 118 72.0
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 3.2e-33 146.7 155 51.6
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.6e-32 144.4 108 59.3
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 1.4e-28 131.3 85 72.9
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 1.1e-25 121.7 114 52.6
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 1.4e-12 78.2 54 66.7
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.0e-10 72.0 49 63.3
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 8.4e-10 68.9 55 52.7
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 1.4e-09 68.2 44 68.2
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 6.0e-08 62.8 42 66.7
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 7.9e-08 62.4 43 62.8


User provided reference genes

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