Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g17510 Schrenkiella parvula HOM05D011082 ORTHO05D007884 6.5e-40 167.2 98 100.0
BcaB02g09441 Brassica carinata HOM05D011082 ORTHO05D007884 9.7e-36 153.3 99 91.9
AT2G35300 Arabidopsis thaliana HOM05D011082 ORTHO05D007884 4.8e-35 151.0 98 87.8
CARHR129450 Cardamine hirsuta HOM05D011082 ORTHO05D007884 1.1e-34 149.8 98 78.6
A05p10480 Brassica napus HOM05D011082 ORTHO05D007884 2.2e-32 142.1 99 87.9
BraA05t19986Z Brassica rapa HOM05D011082 ORTHO05D007884 2.2e-32 142.1 99 86.9
Aa31LG9G15320 Aethionema arabicum HOM05D011082 ORTHO05D007884 3.8e-32 141.4 98 74.5
AL4G31330 Arabidopsis lyrata HOM05D011082 ORTHO05D007884 2.7e-30 135.2 98 84.7
Carub.0004s1699 Capsella rubella HOM05D011082 ORTHO05D007884 6.1e-30 134.0 98 83.7
BcaB02g09447 Brassica carinata HOM05D011082 ORTHO05D007884 2.3e-29 132.1 99 83.8
BcaB02g09452 Brassica carinata HOM05D011082 ORTHO05D007884 2.3e-29 132.1 99 83.8
BcaB02g09457 Brassica carinata HOM05D011082 ORTHO05D007884 2.3e-29 132.1 99 83.8
BcaC02g11633 Brassica carinata HOM05D011082 ORTHO05D007884 2.3e-29 132.1 99 83.8
C04p12880 Brassica napus HOM05D011082 ORTHO05D007884 2.3e-29 132.1 99 83.8
Thhalv10017485m.g Eutrema salsugineum HOM05D011082 ORTHO05D007884 2.0e-28 129.0 86 77.9
BolC4t22932H Brassica oleracea HOM05D011082 ORTHO05D007884 1.4e-26 122.9 99 79.8
BcaB02g09461 Brassica carinata HOM05D011082 ORTHO05D007884 4.2e-23 111.3 83 84.3
THA.LOC104814440 Tarenaya hassleriana HOM05D011082 ORTHO05D007884 8.5e-16 87.0 98 55.1
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 6.8e-13 77.4 96 53.1
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 4.8e-11 71.2 96 46.9
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 1.8e-10 69.3 84 57.1
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 3.1e-10 68.6 105 45.7
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 1.2e-09 66.6 101 44.6
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 2.0e-09 65.9 86 48.8
Ah.07g200240 Amaranthus hybridus HOM05D007324 ORTHO05D007884 3.5e-09 65.1 84 47.6
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 3.5e-09 65.1 95 41.1
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 3.5e-09 65.1 81 56.8
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 5.9e-09 64.3 112 43.8
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 1.0e-08 63.5 87 46.0
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 1.3e-08 63.2 104 40.4
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 2.2e-08 62.4 113 38.1
PSO782G2910 Papaver somniferum HOM05D007324 ORTHO05D007884 3.8e-08 61.6 89 46.1
CSS0050429 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 5.0e-08 61.2 96 42.7
PSO478G0244 Papaver somniferum HOM05D007324 ORTHO05D007884 6.5e-08 60.8 89 46.1
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 1.1e-07 60.1 106 38.7
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 1.5e-07 59.7 81 48.1
Gohir.A08G157700 Gossypium hirsutum HOM05D007324 ORTHO05D007884 2.5e-07 58.9 66 51.5
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 3.2e-07 58.5 83 45.8
PSO782G1330 Papaver somniferum HOM05D007324 ORTHO05D007884 3.2e-07 58.5 86 45.3
A08p09020 Brassica napus HOM05D007324 ORTHO05D007884 4.2e-07 58.2 99 42.4
BraA08t32903Z Brassica rapa HOM05D007324 ORTHO05D007884 4.2e-07 58.2 99 42.4
Gohir.D08G178000 Gossypium hirsutum HOM05D007324 ORTHO05D007884 4.2e-07 58.2 66 50.0
Gorai.004G186200 Gossypium raimondii HOM05D007324 ORTHO05D007884 4.2e-07 58.2 66 50.0
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 5.5e-07 57.8 108 40.7
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 7.2e-07 57.4 98 41.8
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 1.2e-06 56.6 109 39.4
Medtr4g098480 Medicago truncatula HOM05D007324 ORTHO05D007884 1.2e-06 56.6 84 44.0
CsaV3_3G001850 Cucumis sativus L. HOM05D007324 ORTHO05D007884 1.6e-06 56.2 93 41.9
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 1.6e-06 56.2 87 42.5
Oeu047787.1 Olea europaea HOM05D007324 ORTHO05D007884 1.6e-06 56.2 80 43.8
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 2.1e-06 55.8 109 38.5
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 2.1e-06 55.8 109 38.5
Cfa012419 Carpinus fangiana HOM05D007324 ORTHO05D007884 2.1e-06 55.8 95 50.5
SGA_v2.0_scaffold144G35830 Striga asiatica HOM05D007324 ORTHO05D007884 2.7e-06 55.5 105 40.0
BcaB04g17953 Brassica carinata HOM05D007324 ORTHO05D007884 3.6e-06 55.1 112 40.2
Cc08_g02520 Coffea canephora HOM05D007324 ORTHO05D007884 4.7e-06 54.7 80 42.5
Manes.15G168800 Manihot esculenta HOM05D007324 ORTHO05D007884 6.1e-06 54.3 69 52.2
CAN.G201.20 Capsicum annuum HOM05D007324 ORTHO05D007884 8.0e-06 53.9 69 59.4


User provided reference genes

Program Settings