Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 4.4e-89 331.3 167 100.0
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 9.9e-81 303.5 167 91.0
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 4.9e-80 301.2 167 89.8
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 6.4e-80 300.8 167 91.0
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 6.4e-80 300.8 167 91.0
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 1.4e-79 299.7 167 90.4
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 1.9e-79 299.3 167 89.8
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 7.8e-78 293.9 167 88.6
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 4.9e-72 274.6 167 83.8
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 4.9e-72 274.6 167 83.8
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 1.9e-71 272.7 167 82.0
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 1.0e-69 266.9 167 81.4
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 1.5e-68 263.1 167 79.6
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 4.8e-59 231.5 167 70.1
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 2.8e-43 179.1 113 77.9
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 4.8e-43 178.3 105 82.9
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 8.2e-43 177.6 110 79.1
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 8.2e-43 177.6 110 79.1
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 1.2e-41 173.7 119 73.9
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 2.9e-40 169.1 108 76.9
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 3.8e-40 168.7 112 75.9
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 1.1e-39 167.2 133 63.9
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 3.2e-39 165.6 114 72.8
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 3.6e-38 162.2 128 66.4
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 4.6e-38 161.8 129 66.7
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 6.1e-38 161.4 109 74.3
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 1.0e-37 160.6 107 74.8
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 1.8e-37 159.8 94 80.9
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 1.8e-37 159.8 96 81.2
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 2.3e-37 159.5 112 74.1
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 2.3e-37 159.5 130 64.6
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 2.3e-37 159.5 161 57.1
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 3.9e-37 158.7 96 78.1
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 3.9e-37 158.7 119 71.4
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 5.1e-37 158.3 93 80.6
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 6.7e-37 157.9 112 72.3
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 8.8e-37 157.5 94 80.9
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 8.8e-37 157.5 112 72.3
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 1.1e-36 157.1 94 79.8
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 1.1e-36 157.1 97 78.4
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 1.1e-36 157.1 150 58.0
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 1.5e-36 156.8 159 55.3
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 2.5e-36 156.0 96 78.1
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 2.5e-36 156.0 96 78.1
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 4.3e-36 155.2 94 76.6
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 5.7e-36 154.8 139 59.0
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 5.7e-36 154.8 93 79.6
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 5.7e-36 154.8 93 79.6
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 5.7e-36 154.8 133 60.9
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 7.4e-36 154.5 135 63.0
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 7.4e-36 154.5 94 78.7
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 7.4e-36 154.5 128 64.8
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 7.4e-36 154.5 94 76.6
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 9.7e-36 154.1 96 76.0
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 1.3e-35 153.7 93 78.5
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.3e-35 153.7 93 78.5
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.3e-35 153.7 93 78.5
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 1.3e-35 153.7 93 76.3
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 1.3e-35 153.7 93 76.3
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 2.2e-35 152.9 96 76.0
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 2.2e-35 152.9 96 76.0
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 2.2e-35 152.9 93 79.6
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 2.2e-35 152.9 114 68.4
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 2.2e-35 152.9 94 76.6
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 2.8e-35 152.5 115 69.6
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 3.7e-35 152.1 94 77.7
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 4.8e-35 151.8 92 77.2
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 6.3e-35 151.4 92 77.2
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 8.2e-35 151.0 163 53.4
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 8.2e-35 151.0 95 74.7
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 8.2e-35 151.0 114 66.7
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 8.2e-35 151.0 93 78.5
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 5.3e-34 148.3 98 74.5
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 1.5e-33 146.7 96 74.0
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 2.0e-33 146.4 163 50.9
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 2.6e-33 146.0 147 56.5
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 2.6e-33 146.0 147 56.5
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 7.7e-33 144.4 100 69.0
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 1.3e-32 143.7 93 74.2
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 1.7e-32 143.3 124 59.7
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 1.7e-32 143.3 124 59.7
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 1.7e-32 143.3 105 72.4
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 5.5e-31 138.3 95 69.5
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 9.4e-31 137.5 100 66.0
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 1.6e-30 136.7 134 56.0
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 1.4e-29 133.7 93 68.8
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 1.1e-28 130.6 79 81.0
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 5.7e-28 128.3 71 83.1
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 2.4e-26 122.9 72 79.2
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 1.5e-25 120.2 106 55.7
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 1.5e-25 120.2 96 65.6
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 5.9e-25 118.2 89 62.9
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 4.2e-23 112.1 76 72.4
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 9.4e-23 110.9 62 80.6
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 1.6e-22 110.2 134 47.0
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 2.7e-22 109.4 63 81.0
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 3.6e-22 109.0 64 76.6
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 2.8e-19 99.4 62 72.6
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 1.8e-18 96.7 63 66.7
Gohir.A10G120700 Gossypium hirsutum HOM05D007635 ORTHO05D009612 3.3e-12 75.9 52 71.2
Gohir.D10G145600 Gossypium hirsutum HOM05D007635 ORTHO05D009612 1.7e-11 73.6 52 69.2
Thecc.04G214500 Theobroma cacao HOM05D007635 ORTHO05D009612 3.7e-11 72.4 53 67.9


User provided reference genes

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