Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g13610 Schrenkiella parvula HOM05D000098 ORTHO05D001077 8.1e-52 206.8 108 100.0
C04p60460 Brassica napus HOM05D000098 ORTHO05D001077 1.8e-19 99.4 111 54.1
C04p60490 Brassica napus HOM05D000098 ORTHO05D001077 5.3e-19 97.8 111 53.2
C04p60450 Brassica napus HOM05D000098 ORTHO05D001077 1.5e-18 96.3 111 53.2
BolC4t27544H Brassica oleracea HOM05D000098 ORTHO05D001077 1.4e-16 89.7 111 57.7
BcaB06g28502 Brassica carinata HOM05D000098 ORTHO05D001077 1.9e-16 89.4 111 56.8
BcaB06g28503 Brassica carinata HOM05D000098 ORTHO05D001077 1.9e-16 89.4 111 56.8
BcaB06g28504 Brassica carinata HOM05D000098 ORTHO05D001077 1.9e-16 89.4 111 56.8
C04p60480 Brassica napus HOM05D000098 ORTHO05D001077 1.9e-16 89.4 111 56.8
C04p60500 Brassica napus HOM05D000098 ORTHO05D001077 1.9e-16 89.4 111 56.8
BolC4t27547H Brassica oleracea HOM05D000098 ORTHO05D001077 1.9e-16 89.4 111 56.8
BolC4t27549H Brassica oleracea HOM05D000098 ORTHO05D001077 1.9e-16 89.4 111 56.8
BolC4t27550H Brassica oleracea HOM05D000098 ORTHO05D001077 1.9e-16 89.4 111 56.8
BcaB06g28499 Brassica carinata HOM05D000098 ORTHO05D001077 5.5e-16 87.8 111 55.9
BcaB06g28501 Brassica carinata HOM05D000098 ORTHO05D001077 5.5e-16 87.8 111 55.9
C04p60440 Brassica napus HOM05D000098 ORTHO05D001077 5.5e-16 87.8 111 55.9
BolC4t27545H Brassica oleracea HOM05D000098 ORTHO05D001077 5.5e-16 87.8 111 55.9
C04p60510 Brassica napus HOM05D000098 ORTHO05D001077 1.8e-14 82.8 111 53.2
BcaB06g28497 Brassica carinata HOM05D000098 ORTHO05D001077 2.3e-14 82.4 111 54.1
BolC4t27543H Brassica oleracea HOM05D000098 ORTHO05D001077 2.3e-14 82.4 111 54.1
Thhalv10017568m.g Eutrema salsugineum HOM05D000098 ORTHO05D001077 1.1e-13 80.1 110 48.2
Thhalv10017707m.g Eutrema salsugineum HOM05D000098 ORTHO05D001077 1.1e-13 80.1 110 48.2
BcaC02g11187 Brassica carinata HOM05D000098 ORTHO05D001077 1.7e-12 76.3 111 42.3
BcaC02g11188 Brassica carinata HOM05D000098 ORTHO05D001077 1.7e-12 76.3 111 42.3
C04p19480 Brassica napus HOM05D000098 ORTHO05D001077 1.7e-12 76.3 111 42.3
BolC4t23480H Brassica oleracea HOM05D000098 ORTHO05D001077 1.7e-12 76.3 111 42.3
Thhalv10017608m.g Eutrema salsugineum HOM05D000098 ORTHO05D001077 1.7e-12 76.3 102 50.0
Thhalv10017858m.g Eutrema salsugineum HOM05D000098 ORTHO05D001077 1.1e-11 73.6 110 45.5
Sp4g13520 Schrenkiella parvula HOM05D000098 ORTHO05D001077 1.4e-11 73.2 110 44.5
A05p14610 Brassica napus HOM05D000098 ORTHO05D001077 2.4e-11 72.4 111 40.5
BraA05t20390Z Brassica rapa HOM05D000098 ORTHO05D001077 2.4e-11 72.4 111 40.5
BcaC02g11191 Brassica carinata HOM05D000098 ORTHO05D001077 4.1e-11 71.6 110 40.9
C04p19450 Brassica napus HOM05D000098 ORTHO05D001077 4.1e-11 71.6 110 40.9
BolC4t23476H Brassica oleracea HOM05D000098 ORTHO05D001077 4.1e-11 71.6 110 40.9
Carub.0004s1241 Capsella rubella HOM05D000098 ORTHO05D001077 5.3e-11 71.2 110 44.5
Carub.0004s1227 Capsella rubella HOM05D000098 ORTHO05D001077 7.0e-11 70.9 110 44.5
Thhalv10017820m.g Eutrema salsugineum HOM05D000098 ORTHO05D001077 7.0e-11 70.9 89 51.7
BcaB02g10358 Brassica carinata HOM05D000098 ORTHO05D001077 1.2e-10 70.1 110 41.8
BcaB02g10359 Brassica carinata HOM05D000098 ORTHO05D001077 1.2e-10 70.1 110 41.8
Thhalv10017630m.g Eutrema salsugineum HOM05D000098 ORTHO05D001077 7.7e-10 67.4 110 42.7
BcaB06g28498 Brassica carinata HOM05D000098 ORTHO05D001077 1.0e-09 67.0 83 50.6
AT2G31050 Arabidopsis thaliana HOM05D000098 ORTHO05D001077 2.2e-09 65.9 111 42.3
BcaB06g28500 Brassica carinata HOM05D000098 ORTHO05D001077 2.2e-09 65.9 111 40.5
BolC4t27546H Brassica oleracea HOM05D000098 ORTHO05D001077 2.2e-09 65.9 111 40.5
Carub.0004s1240 Capsella rubella HOM05D000098 ORTHO05D001077 2.9e-09 65.5 141 36.2
AL4G26160 Arabidopsis lyrata HOM05D000098 ORTHO05D001077 1.1e-08 63.5 110 40.9
BcaC02g08047 Brassica carinata HOM05D000098 ORTHO05D001077 1.9e-08 62.8 110 40.9
A04p22880 Brassica napus HOM05D000098 ORTHO05D001077 7.2e-08 60.8 110 40.0
Carub.0004s1242 Capsella rubella HOM05D000098 ORTHO05D001077 7.2e-08 60.8 112 39.3
Thhalv10017770m.g Eutrema salsugineum HOM05D000098 ORTHO05D001077 9.4e-08 60.5 129 43.4
C04p59060 Brassica napus HOM05D000098 ORTHO05D001077 1.6e-07 59.7 85 43.5
BolC4t27418H Brassica oleracea HOM05D000098 ORTHO05D001077 1.6e-07 59.7 85 43.5
CARHR124730 Cardamine hirsuta HOM05D000098 ORTHO05D001077 1.6e-07 59.7 109 41.3
A04p22930 Brassica napus HOM05D000098 ORTHO05D001077 2.1e-07 59.3 110 40.0
Thhalv10017853m.g Eutrema salsugineum HOM05D000098 ORTHO05D001077 3.6e-07 58.5 84 46.4
AL4G24360 Arabidopsis lyrata HOM05D000098 ORTHO05D001077 6.1e-07 57.8 136 36.8
AL4G26320 Arabidopsis lyrata HOM05D000098 ORTHO05D001077 8.0e-07 57.4 112 39.3
Thhalv10026766m.g Eutrema salsugineum HOM05D000098 ORTHO05D001077 1.8e-06 56.2 83 42.2
AT2G26720 Arabidopsis thaliana HOM05D000098 ORTHO05D001077 4.0e-06 55.1 131 38.9


User provided reference genes

Program Settings