Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g09900 Schrenkiella parvula HOM05D001338 ORTHO05D001239 6.7e-133 477.2 225 100.0
AL4G20870 Arabidopsis lyrata HOM05D001338 ORTHO05D001239 2.4e-58 229.6 159 65.4
Thhalv10009558m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 3.8e-43 179.1 155 54.8
Thhalv10009736m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 6.5e-43 178.3 155 54.8
PSO063G4296 Papaver somniferum HOM05D001338 ORTHO05D001239 6.9e-37 158.3 150 50.0
Oeu012605.1 Olea europaea HOM05D001338 ORTHO05D001239 1.2e-36 157.5 171 46.2
AT4G10200 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 7.6e-36 154.8 141 51.1
PSO210G0436 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-34 150.6 139 51.8
CARHR103200 Cardamine hirsuta HOM05D001338 ORTHO05D001239 1.9e-34 150.2 139 51.8
PSO541G0488 Papaver somniferum HOM05D001338 ORTHO05D001239 1.9e-34 150.2 165 46.1
CSS0006650 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 3.2e-34 149.4 172 44.8
CSS0027088 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 7.2e-34 148.3 167 47.3
PSO478G0924 Papaver somniferum HOM05D001338 ORTHO05D001239 7.2e-34 148.3 167 45.5
TWI31G1167 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 6.1e-33 145.2 162 43.8
PSO421G0097 Papaver somniferum HOM05D001338 ORTHO05D001239 1.8e-32 143.7 163 44.8
CSS0047876 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.3e-32 143.3 152 49.3
TWI31G0800 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.3e-32 143.3 162 43.2
TWI74G0957 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 3.0e-32 142.9 162 43.2
PSO339G3749 Papaver somniferum HOM05D001338 ORTHO05D001239 1.5e-31 140.6 149 45.6
Oeu003234.1 Olea europaea HOM05D001338 ORTHO05D001239 3.3e-31 139.4 153 47.1
TWI18G0851 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 4.3e-31 139.0 162 42.6
Zm00001eb237490 Zea mays HOM05D001338 ORTHO05D001239 4.3e-31 139.0 162 41.4
RcHm_v2.0_Chr7g0198811 Rosa chinensis HOM05D001338 ORTHO05D001239 5.7e-31 138.7 163 43.6
Thhalv10017956m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 9.7e-31 137.9 135 48.9
Zm00001eb027500 Zea mays HOM05D001338 ORTHO05D001239 1.3e-30 137.5 169 42.0
PSO063G3812 Papaver somniferum HOM05D001338 ORTHO05D001239 2.2e-30 136.7 147 46.9
FvH4_1g08761 Fragaria vesca HOM05D001338 ORTHO05D001239 2.8e-30 136.3 140 47.1
BolC2t08893H Brassica oleracea HOM05D001338 ORTHO05D001239 6.3e-30 135.2 137 43.1
CSS0005716 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 6.3e-30 135.2 135 49.6
PSO478G0891 Papaver somniferum HOM05D001338 ORTHO05D001239 6.3e-30 135.2 140 45.7
PSO675G8898 Papaver somniferum HOM05D001338 ORTHO05D001239 6.3e-30 135.2 172 41.9
PSO761G0174 Papaver somniferum HOM05D001338 ORTHO05D001239 6.3e-30 135.2 140 45.7
FvH4_5g30891 Fragaria vesca HOM05D001338 ORTHO05D001239 1.1e-29 134.4 140 46.4
CANSAT54G1040 Cannabis sativa HOM05D001338 ORTHO05D001239 1.8e-29 133.7 137 48.9
PSO384G4132 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-29 133.3 169 42.0
PSO541G1638 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-29 133.3 172 39.5
HanXRQChr11g0321041 Helianthus annuus HOM05D001338 ORTHO05D001239 3.1e-29 132.9 137 46.7
PSO541G2490 Papaver somniferum HOM05D001338 ORTHO05D001239 4.1e-29 132.5 140 45.7
PSO801G0680 Papaver somniferum HOM05D001338 ORTHO05D001239 4.1e-29 132.5 172 41.3
FvH4_4g01531 Fragaria vesca HOM05D001338 ORTHO05D001239 9.0e-29 131.3 137 48.2
PSO170G2214 Papaver somniferum HOM05D001338 ORTHO05D001239 9.0e-29 131.3 140 47.9
PSO104G0173 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-28 131.0 140 45.0
PSO478G4662 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-28 131.0 167 41.9
Medtr4g010145 Medicago truncatula HOM05D001338 ORTHO05D016692 1.5e-28 130.6 137 47.4
PSO478G1760 Papaver somniferum HOM05D001338 ORTHO05D001239 1.5e-28 130.6 167 41.9
Oeu008700.1 Olea europaea HOM05D001338 ORTHO05D001239 2.0e-28 130.2 145 44.1
PSO170G1703 Papaver somniferum HOM05D001338 ORTHO05D001239 2.6e-28 129.8 140 45.0
Aqoxy5G02339 Aquilegia oxysepala HOM05D001338 ORTHO05D001239 4.5e-28 129.0 126 50.0
Zm00001eb077850 Zea mays HOM05D001338 ORTHO05D001239 4.5e-28 129.0 162 42.6
PSO063G6584 Papaver somniferum HOM05D001338 ORTHO05D001239 5.9e-28 128.6 169 41.4
PSO144G0149 Papaver somniferum HOM05D001338 ORTHO05D001239 5.9e-28 128.6 167 41.3
PSO210G5802 Papaver somniferum HOM05D001338 ORTHO05D001239 5.9e-28 128.6 147 46.3
PSO764G0071 Papaver somniferum HOM05D001338 ORTHO05D001239 5.9e-28 128.6 167 41.3
PSO832G4176 Papaver somniferum HOM05D001338 ORTHO05D001239 5.9e-28 128.6 167 41.3
FvH4_6g47642 Fragaria vesca HOM05D001338 ORTHO05D001239 1.0e-27 127.9 140 45.0
PSO063G7197 Papaver somniferum HOM05D001338 ORTHO05D001239 1.7e-27 127.1 167 40.7
PSO832G0837 Papaver somniferum HOM05D001338 ORTHO05D001239 1.7e-27 127.1 126 47.6
Oeu016868.1 Olea europaea HOM05D001338 ORTHO05D001239 2.2e-27 126.7 154 43.5
PSO063G4981 Papaver somniferum HOM05D001338 ORTHO05D001239 2.2e-27 126.7 167 41.3
PSO541G5408 Papaver somniferum HOM05D001338 ORTHO05D001239 3.8e-27 125.9 124 46.8
AUR62026124 Chenopodium quinoa HOM05D001338 ORTHO05D001239 5.0e-27 125.6 147 44.2
PSO801G0142 Papaver somniferum HOM05D001338 ORTHO05D001239 5.0e-27 125.6 129 48.1
CANSAT64G1081 Cannabis sativa HOM05D001338 ORTHO05D001239 8.5e-27 124.8 137 46.0
Oeu028129.1 Olea europaea HOM05D001338 ORTHO05D001239 8.5e-27 124.8 154 41.6
PSO063G1472 Papaver somniferum HOM05D001338 ORTHO05D001239 8.5e-27 124.8 173 38.7
PSO210G1522 Papaver somniferum HOM05D001338 ORTHO05D001239 8.5e-27 124.8 166 42.8
PSO478G0790 Papaver somniferum HOM05D001338 ORTHO05D001239 8.5e-27 124.8 169 40.8
CANSAT35G0728 Cannabis sativa HOM05D001338 ORTHO05D001239 2.5e-26 123.2 166 42.2
CANSAT11G1935 Cannabis sativa HOM05D001338 ORTHO05D001239 3.2e-26 122.9 166 42.2
CANSAT21G0118 Cannabis sativa HOM05D001338 ORTHO05D001239 3.2e-26 122.9 159 42.8
CANSAT21G2437 Cannabis sativa HOM05D001338 ORTHO05D001239 3.2e-26 122.9 159 42.8
TWI73G0975 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 7.2e-26 121.7 165 43.0
ECA236G1638 Erigeron canadensis HOM05D001338 ORTHO05D001239 9.4e-26 121.3 143 45.5
Oeu063768.1 Olea europaea HOM05D001338 ORTHO05D001239 2.7e-25 119.8 155 40.6
PSO781G0133 Papaver somniferum HOM05D001338 ORTHO05D001239 3.6e-25 119.4 137 46.0
Oeu042321.2 Olea europaea HOM05D001338 ORTHO05D001239 1.0e-24 117.9 145 41.4
Glyma.12G093566 Glycine max HOM05D001338 ORTHO05D001239 1.4e-24 117.5 125 48.0
Oeu054316.1 Olea europaea HOM05D001338 ORTHO05D001239 2.3e-24 116.7 154 40.9
ECA232G0049 Erigeron canadensis HOM05D001338 ORTHO05D001239 3.9e-24 115.9 143 43.4
Oeu056073.1 Olea europaea HOM05D001338 ORTHO05D001239 3.9e-24 115.9 124 45.2
PSO384G1931 Papaver somniferum HOM05D001338 ORTHO05D001239 1.5e-23 114.0 148 40.5
PSO781G0216 Papaver somniferum HOM05D001338 ORTHO05D001239 1.5e-23 114.0 120 45.0
FvH4_2g32571 Fragaria vesca HOM05D001338 ORTHO05D001239 4.3e-23 112.5 107 50.5
Oeu029248.1 Olea europaea HOM05D001338 ORTHO05D001239 5.7e-23 112.1 127 46.5
Medtr5g056540 Medicago truncatula HOM05D001338 ORTHO05D001239 1.3e-22 110.9 154 39.6
PSO724G0974 Papaver somniferum HOM05D001338 ORTHO05D001239 1.7e-22 110.5 173 34.1
MD01G1087700 Malus domestica HOM05D001113 ORTHO05D000968 8.2e-22 108.2 122 41.0
CANSAT11G0800 Cannabis sativa HOM05D001338 ORTHO05D001239 3.1e-21 106.3 150 41.3
Glyma.14G107400 Glycine max HOM05D001338 ORTHO05D001239 1.2e-20 104.4 169 35.5
Oeu063134.1 Olea europaea HOM05D001338 ORTHO05D001239 1.2e-20 104.4 113 46.0
TPR.G34669 Trifolium pratense HOM05D001338 ORTHO05D001239 1.5e-20 104.0 90 53.3
CANSAT01G1009 Cannabis sativa HOM05D001338 ORTHO05D001239 7.7e-20 101.7 115 45.2
PSO017G0847 Papaver somniferum HOM05D001338 ORTHO05D001239 1.7e-19 100.5 166 38.6
Zm00001eb109540 Zea mays HOM05D001338 ORTHO05D001239 1.7e-19 100.5 128 40.6
Zm00001eb123550 Zea mays HOM05D001338 ORTHO05D001239 1.7e-19 100.5 128 40.6
Zm00001eb125380 Zea mays HOM05D001338 ORTHO05D001239 1.7e-19 100.5 128 40.6
Zm00001eb152380 Zea mays HOM05D001338 ORTHO05D001239 1.7e-19 100.5 128 40.6
PSO832G0893 Papaver somniferum HOM05D001338 ORTHO05D001239 5.0e-19 99.0 125 41.6
MD02G1227000 Malus domestica HOM05D000696 ORTHO05D001239 6.5e-19 98.6 131 38.9
Gohir.A06G101504 Gossypium hirsutum HOM05D001338 ORTHO05D001239 2.5e-18 96.7 131 37.4
Oeu053421.1 Olea europaea HOM05D001338 ORTHO05D001239 4.2e-18 95.9 138 37.7
PSO541G2431 Papaver somniferum HOM05D001338 ORTHO05D001239 5.5e-18 95.5 106 45.3
PSO724G1235 Papaver somniferum HOM05D001338 ORTHO05D001239 5.5e-18 95.5 138 42.0
PSO782G2576 Papaver somniferum HOM05D001338 ORTHO05D001239 9.4e-18 94.7 103 43.7
Oeu048409.1 Olea europaea HOM05D001338 ORTHO05D001239 1.2e-17 94.4 112 45.5
Gohir.D06G166250 Gossypium hirsutum HOM05D001338 ORTHO05D001239 2.7e-17 93.2 139 36.7
Oeu023192.1 Olea europaea HOM05D001338 ORTHO05D001239 2.7e-17 93.2 86 48.8
Sp1g32380 Schrenkiella parvula HOM05D001338 ORTHO05D001239 2.7e-17 93.2 156 35.9
RcHm_v2.0_Chr1g0320361 Rosa chinensis HOM05D001338 ORTHO05D001239 3.6e-17 92.8 136 39.7
PSO461G0028 Papaver somniferum HOM05D001338 ORTHO05D001239 7.9e-17 91.7 107 42.1
Sp6g08540 Schrenkiella parvula HOM05D001338 ORTHO05D001239 2.3e-16 90.1 145 37.2
PSO384G2104 Papaver somniferum HOM05D001338 ORTHO05D001239 5.1e-16 89.0 87 46.0
RcHm_v2.0_Chr7g0230921 Rosa chinensis HOM05D001338 ORTHO05D029707 1.1e-15 87.8 114 42.1
TWI74G0662 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.5e-15 87.4 162 32.7
TWI81G1066 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.6e-15 86.7 85 42.4
PSO210G4276 Papaver somniferum HOM05D001338 ORTHO05D001239 7.4e-15 85.1 87 42.5
RcHm_v2.0_Chr6g0308901 Rosa chinensis HOM05D001338 ORTHO05D001239 1.7e-14 84.0 77 51.9
AT1G35150 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 6.3e-14 82.0 160 35.0
FvH4_7g07902 Fragaria vesca HOM05D001338 ORTHO05D001239 4.1e-13 79.3 95 45.3
FvH4_1g10851 Fragaria vesca HOM05D001338 ORTHO05D001239 9.1e-13 78.2 132 33.3
Oeu005280.1 Olea europaea HOM05D001338 ORTHO05D001239 9.1e-13 78.2 88 47.7
Oeu063541.1 Olea europaea HOM05D001338 ORTHO05D001239 1.2e-12 77.8 78 50.0
AUR62037832 Chenopodium quinoa HOM05D001338 ORTHO05D001239 2.0e-12 77.0 121 39.7
CiPaw.04G075300 Carya illinoinensis HOM05D001338 ORTHO05D001239 2.2e-11 73.6 86 41.9
Zm00001eb204510 Zea mays HOM05D001338 ORTHO05D001239 6.5e-11 72.0 63 49.2
Oeu064839.1 Olea europaea HOM05D001338 ORTHO05D001239 8.5e-11 71.6 62 51.6
SpUn0007_0210 Schrenkiella parvula HOM05D001338 ORTHO05D001239 1.5e-10 70.9 116 38.8
Oeu034167.1 Olea europaea HOM05D001338 ORTHO05D001239 1.9e-10 70.5 61 54.1
CANSAT54G1041 Cannabis sativa HOM05D001338 ORTHO05D001239 4.2e-10 69.3 137 32.8
PSO138G0010 Papaver somniferum HOM05D001338 ORTHO05D001239 5.5e-10 68.9 68 48.5
HanXRQChr10g0286761 Helianthus annuus HOM05D001338 ORTHO05D001239 1.2e-09 67.8 85 42.4
Oeu052557.1 Olea europaea HOM05D001338 ORTHO05D001239 1.2e-09 67.8 74 40.5
Oeu012998.1 Olea europaea HOM05D001338 ORTHO05D001239 2.7e-09 66.6 74 40.5
Oeu034372.1 Olea europaea HOM05D001338 ORTHO05D001239 1.0e-08 64.7 74 39.2
Thhalv10024135m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.4e-08 64.3 105 37.1
Lj3g0020482 Lotus japonicus HOM05D000254 ORTHO05D000165 2.3e-08 63.5 150 33.3
CiPaw.15G122600 Carya illinoinensis HOM05D001338 ORTHO05D001239 3.0e-08 63.2 95 35.8
Oeu012177.1 Olea europaea HOM05D001338 ORTHO05D001239 3.0e-08 63.2 70 41.4
Oeu020403.1 Olea europaea HOM05D001338 ORTHO05D001239 4.0e-08 62.8 70 41.4
Oeu025447.1 Olea europaea HOM05D001338 ORTHO05D001239 4.0e-08 62.8 90 41.1
Lj1g0025794 Lotus japonicus HOM05D000254 ORTHO05D000165 5.2e-08 62.4 150 32.7
Lj5g0016684 Lotus japonicus HOM05D000254 ORTHO05D000165 5.2e-08 62.4 150 32.7
CSS0007608 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.1e-07 61.2 89 39.3
ECA238G3762 Erigeron canadensis HOM05D000254 ORTHO05D000165 1.5e-07 60.8 86 40.7
Sopen11g008380 Solanum pennellii HOM05D000254 ORTHO05D000165 2.0e-07 60.5 112 31.2
Oeu006251.1 Olea europaea HOM05D001338 ORTHO05D001239 2.6e-07 60.1 169 24.9
CSS0039736 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 7.5e-07 58.5 67 41.8
CANSAT46G0001 Cannabis sativa HOM05D001338 ORTHO05D001239 7.5e-07 58.5 85 40.0
TWI74G1236 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.2e-06 57.0 62 38.7
AT2G06500 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 2.8e-06 56.6 48 52.1
Glyma.17G230400 Glycine max HOM05D000254 ORTHO05D000165 2.8e-06 56.6 166 27.7
Glyma.03G059500 Glycine max HOM05D000254 ORTHO05D000165 3.7e-06 56.2 166 28.3
TPR.G17453 Trifolium pratense HOM05D001338 ORTHO05D001239 3.7e-06 56.2 71 36.6
Glyma.02G075400 Glycine max HOM05D000254 ORTHO05D000165 4.8e-06 55.8 166 27.7
Glyma.02G075500 Glycine max HOM05D000254 ORTHO05D000165 4.8e-06 55.8 166 27.7
Glyma.02G163400 Glycine max HOM05D000254 ORTHO05D000165 4.8e-06 55.8 166 27.7
Glyma.03G160800 Glycine max HOM05D000254 ORTHO05D000165 4.8e-06 55.8 166 27.7
Glyma.09G085100 Glycine max HOM05D000254 ORTHO05D000165 4.8e-06 55.8 166 27.7
Glyma.09G092200 Glycine max HOM05D000254 ORTHO05D000165 4.8e-06 55.8 166 27.7
Glyma.10G093700 Glycine max HOM05D000254 ORTHO05D000165 4.8e-06 55.8 166 27.7
Glyma.11G185400 Glycine max HOM05D000254 ORTHO05D000165 4.8e-06 55.8 166 27.7
Glyma.15G026200 Glycine max HOM05D000254 ORTHO05D000165 4.8e-06 55.8 166 27.7
Glyma.U036600 Glycine max HOM05D000254 ORTHO05D000165 4.8e-06 55.8 166 27.7
Lj1g0011213 Lotus japonicus HOM05D000254 ORTHO05D000165 4.8e-06 55.8 109 35.8
Glyma.07G188300 Glycine max HOM05D000254 ORTHO05D000165 6.3e-06 55.5 166 27.7
PSO063G5722 Papaver somniferum HOM05D001338 ORTHO05D001239 6.3e-06 55.5 142 28.2
Glyma.06G110300 Glycine max HOM05D000254 ORTHO05D000165 8.2e-06 55.1 166 27.7
TWI38G0087 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 8.2e-06 55.1 105 37.1


User provided reference genes

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