Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g09570 Schrenkiella parvula HOM05D000107 ORTHO05D000062 1.7e-105 386.0 191 100.0
Lalb_Chr10g0094831 Lupinus albus HOM05D000107 ORTHO05D000062 2.0e-13 80.1 59 57.6
Ca_02604_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.3e-12 77.4 88 37.5
Sopen04g016700 Solanum pennellii HOM05D000107 ORTHO05D000062 1.3e-12 77.4 59 52.5
Ca_14703_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.7e-12 77.0 69 42.0
Solyc05g042015.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 1.7e-12 77.0 56 50.0
Ca_11754_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.9e-12 76.3 88 37.5
Rhsim11G0004800 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.9e-12 76.3 88 44.3
TPR.G13772 Trifolium pratense HOM05D000107 ORTHO05D000062 5.0e-12 75.5 84 40.5
Lj1g0012478 Lotus japonicus HOM05D000107 ORTHO05D000062 6.5e-12 75.1 54 48.1
CAN.G501.3 Capsicum annuum HOM05D000107 ORTHO05D000062 8.5e-12 74.7 56 44.6
Ca_02605_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.5e-11 73.9 83 37.3
Sopen08g018280 Solanum pennellii HOM05D000107 ORTHO05D000695 1.5e-11 73.9 59 45.8
Ca_23803_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 3.2e-11 72.8 109 34.9
Rhsim04G0054900 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.2e-11 72.8 57 54.4
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.2e-11 72.8 57 54.4
Sopen11g015850 Solanum pennellii HOM05D000107 ORTHO05D000062 3.2e-11 72.8 67 41.8
PGSC0003DMG400011670 Solanum tuberosum HOM05D000107 ORTHO05D000062 4.2e-11 72.4 85 41.2
Os12g0544600 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 5.5e-11 72.0 61 47.5
Psat5g178040 Pisum sativum HOM05D002954 ORTHO05D003353 7.2e-11 71.6 54 53.7
Solyc05g042155.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 1.2e-10 70.9 67 40.3
TPR.G34598 Trifolium pratense HOM05D000107 ORTHO05D000062 1.6e-10 70.5 113 33.6
CSS0009906 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.6e-10 69.3 61 49.2
Os01g0768600 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 4.7e-10 68.9 61 45.9
Os02g0543900 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 6.1e-10 68.6 61 45.9
Psat0s2381g0040 Pisum sativum HOM05D000107 ORTHO05D000062 6.1e-10 68.6 101 40.6
Psat0s472g0040 Pisum sativum HOM05D000107 ORTHO05D000062 6.1e-10 68.6 101 40.6
Nn1g06875 Nelumbo nucifera HOM05D000107 ORTHO05D000062 8.0e-10 68.2 75 44.0
Psat6g199080 Pisum sativum HOM05D000107 ORTHO05D000062 8.0e-10 68.2 93 30.1
Sopen09g020930 Solanum pennellii HOM05D000107 ORTHO05D000062 8.0e-10 68.2 54 48.1
CSS0030837 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.0e-09 67.8 60 46.7
EL10Ac2g03191 Beta vulgaris HOM05D000107 ORTHO05D000062 1.4e-09 67.4 61 41.0
CSS0018298 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.4e-09 67.4 60 48.3
AUR62036790 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.4e-09 67.4 61 47.5
Os08g0215300 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 1.4e-09 67.4 90 36.7
Rhsim01G0072500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-09 67.4 53 47.2
CSS0014451 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.8e-09 67.0 60 48.3
Psat1g138720 Pisum sativum HOM05D000107 ORTHO05D000062 1.8e-09 67.0 53 45.3
Psat2g020120 Pisum sativum HOM05D002954 ORTHO05D000062 1.8e-09 67.0 54 50.0
Psat6g201280 Pisum sativum HOM05D000107 ORTHO05D000062 2.3e-09 66.6 99 29.3
C01p31680 Brassica napus HOM05D008309 ORTHO05D000062 3.0e-09 66.2 38 76.3
BraA01t02865Z Brassica rapa HOM05D008309 ORTHO05D010308 3.0e-09 66.2 38 76.3
BraA05t22683Z Brassica rapa HOM05D008309 ORTHO05D000062 3.0e-09 66.2 38 76.3
AUR62040738 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.2e-09 65.5 54 44.4
TAR003G0008 Trochodendron aralioides HOM05D000107 ORTHO05D000062 5.2e-09 65.5 83 36.1
EL10As28g24252 Beta vulgaris HOM05D000107 ORTHO05D000062 6.8e-09 65.1 55 43.6
AUR62025907 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.8e-09 65.1 56 44.6
EL10Ac2g03157 Beta vulgaris HOM05D000107 ORTHO05D000062 8.8e-09 64.7 61 39.3
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.8e-09 64.7 61 42.6
Solyc09g030515.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 1.2e-08 64.3 112 32.1
TAR165G0003 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.2e-08 64.3 83 33.7
BolC1t03108H Brassica oleracea HOM05D001350 ORTHO05D001091 1.5e-08 63.9 38 73.7
TAR528G0005 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.5e-08 63.9 86 36.0
RhsimUnG0245800 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-08 63.5 63 41.3
EL10As2g23233 Beta vulgaris HOM05D000107 ORTHO05D000062 2.6e-08 63.2 54 42.6
EL10Ac1g01130 Beta vulgaris HOM05D000107 ORTHO05D000062 3.4e-08 62.8 52 44.2
EL10Ac1g01187 Beta vulgaris HOM05D000107 ORTHO05D000062 3.4e-08 62.8 52 44.2
EL10Ac2g03906 Beta vulgaris HOM05D000107 ORTHO05D000062 3.4e-08 62.8 52 44.2
EL10Ac4g08893 Beta vulgaris HOM05D000107 ORTHO05D000062 3.4e-08 62.8 52 44.2
EL10Ac4g09022 Beta vulgaris HOM05D000107 ORTHO05D000062 3.4e-08 62.8 52 44.2
EL10Ac6g14098 Beta vulgaris HOM05D000107 ORTHO05D000062 3.4e-08 62.8 52 44.2
EL10Ac9g21093 Beta vulgaris HOM05D000107 ORTHO05D000062 3.4e-08 62.8 52 44.2
Psat4g189240 Pisum sativum HOM05D000107 ORTHO05D000062 3.4e-08 62.8 99 28.3
EL10Ac5g11722 Beta vulgaris HOM05D000107 ORTHO05D000062 4.4e-08 62.4 61 39.3
EL10Ac5g11735 Beta vulgaris HOM05D000107 ORTHO05D000062 4.4e-08 62.4 54 42.6
EL10Ac7g16605 Beta vulgaris HOM05D000107 ORTHO05D000062 4.4e-08 62.4 53 43.4
EL10Ac7g17482 Beta vulgaris HOM05D000107 ORTHO05D000062 4.4e-08 62.4 53 43.4
EL10Ac7g18149 Beta vulgaris HOM05D000107 ORTHO05D000062 4.4e-08 62.4 53 43.4
EL10Ac9g22338 Beta vulgaris HOM05D000107 ORTHO05D000062 4.4e-08 62.4 54 42.6
Ca_08868_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 4.4e-08 62.4 116 34.5
QL02p061961 Quercus lobata HOM05D020237 ORTHO05D000062 4.4e-08 62.4 90 42.2
EL10Ac5g11714 Beta vulgaris HOM05D000107 ORTHO05D000062 5.7e-08 62.0 53 41.5
EL10Ac9g20977 Beta vulgaris HOM05D000107 ORTHO05D000062 5.7e-08 62.0 52 44.2
CSS0013777 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.7e-08 62.0 99 39.4
CSS0021554 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.7e-08 62.0 99 39.4
CSS0023291 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.7e-08 62.0 99 39.4
CSS0043289 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.7e-08 62.0 99 39.4
CSS0044341 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.7e-08 62.0 99 39.4
CSS0048713 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.7e-08 62.0 99 39.4
TAR634G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 7.5e-08 61.6 55 47.3
EL10Ac3g06670 Beta vulgaris HOM05D000107 ORTHO05D000062 9.8e-08 61.2 54 44.4
AUR62036317 Chenopodium quinoa HOM05D000107 ORTHO05D000062 9.8e-08 61.2 52 42.3
QL04p092704 Quercus lobata HOM05D000107 ORTHO05D000062 9.8e-08 61.2 54 50.0
EL10Ac3g06412 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-07 60.8 52 42.3
EL10Ac3g06562 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-07 60.8 61 42.6
CSS0007461 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-07 60.8 69 39.1
CSS0007472 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-07 60.8 69 39.1
CSS0007710 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-07 60.8 69 39.1
CSS0009480 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-07 60.8 69 39.1
CSS0013241 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-07 60.8 69 39.1
CSS0018002 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-07 60.8 69 39.1
CSS0026161 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-07 60.8 69 39.1
CSS0028705 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-07 60.8 69 39.1
CSS0031171 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-07 60.8 69 39.1
CSS0036122 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-07 60.8 69 39.1
CSS0047073 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-07 60.8 69 39.1
ECA232G4413 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.3e-07 60.8 86 40.7
Nn7g37794 Nelumbo nucifera HOM05D000107 ORTHO05D000062 1.3e-07 60.8 92 35.9
TAR472G0001 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.3e-07 60.8 83 33.7
EL10Ac2g03338 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-07 60.5 53 43.4
ECA246G3624 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.7e-07 60.5 58 43.1
FvH4_4g09832 Fragaria vesca HOM05D005012 ORTHO05D005886 1.7e-07 60.5 53 47.2
FvH4_6g21852 Fragaria vesca HOM05D000107 ORTHO05D000062 1.7e-07 60.5 53 47.2
Rhsim05G0054900 Rhododendron simsii HOM05D004144 ORTHO05D004902 1.7e-07 60.5 50 42.0
AUR62019602 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.2e-07 60.1 52 46.2
EL10Ac9g21156 Beta vulgaris HOM05D000107 ORTHO05D000062 2.8e-07 59.7 52 42.3
CSS0000324 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.8e-07 59.7 85 30.6
CSS0004309 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.8e-07 59.7 85 29.4
CANSAT11G2258 Cannabis sativa HOM05D000107 ORTHO05D000062 2.8e-07 59.7 40 62.5
AUR62002657 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.8e-07 59.7 52 42.3
Ca_23808_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.8e-07 59.7 75 34.7
CANSAT78G2036 Cannabis sativa HOM05D000107 ORTHO05D000062 4.8e-07 58.9 39 61.5
Ca_12564_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.8e-07 58.9 39 53.8
Hma1.2p1_0811F.1_g222120 Hydrangea macrophylla HOM05D000107 ORTHO05D000062 4.8e-07 58.9 83 38.6
MBI19_g18418_MAGBIO Magnolia biondii HOM05D000107 ORTHO05D000062 4.8e-07 58.9 54 37.0
Rhsim01G0178800 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.8e-07 58.9 48 54.2
EL10Ac6g14601 Beta vulgaris HOM05D000107 ORTHO05D000062 6.3e-07 58.5 52 42.3
ECA234G2344 Erigeron canadensis HOM05D000107 ORTHO05D000062 6.3e-07 58.5 76 36.8
FvH4_3g22002 Fragaria vesca HOM05D000107 ORTHO05D000062 6.3e-07 58.5 53 47.2
TAR211G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 6.3e-07 58.5 91 30.8
TAR541G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 6.3e-07 58.5 91 38.5
EL10Ac2g03283 Beta vulgaris HOM05D000107 ORTHO05D000062 8.3e-07 58.2 51 41.2
CSS0004152 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 8.3e-07 58.2 85 29.4
ECA247G3443 Erigeron canadensis HOM05D000107 ORTHO05D000062 8.3e-07 58.2 53 41.5
Ah.08g221350 Amaranthus hybridus HOM05D000107 ORTHO05D000062 1.1e-06 57.8 51 41.2
EL10Ac3g06228 Beta vulgaris HOM05D000107 ORTHO05D000062 1.1e-06 57.8 48 45.8
EL10Ac5g12063 Beta vulgaris HOM05D000107 ORTHO05D000062 1.1e-06 57.8 48 45.8
AUR62037786 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.1e-06 57.8 70 38.6
ECA164G0001 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.1e-06 57.8 58 41.4
ECA233G5567 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.1e-06 57.8 58 41.4
ECA247G3079 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.1e-06 57.8 58 41.4
ECA248G1771 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.1e-06 57.8 58 41.4
Rhsim05G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-06 57.4 94 30.9
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-06 57.4 84 31.0
ECA096G0002 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.8e-06 57.0 62 40.3
FvH4_4g09791 Fragaria vesca HOM05D000107 ORTHO05D000062 1.8e-06 57.0 53 45.3
ECA236G1122 Erigeron canadensis HOM05D009609 ORTHO05D011572 2.4e-06 56.6 170 27.1
Rhsim01G0080000 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.4e-06 56.6 53 41.5
Rhsim01G0081600 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.4e-06 56.6 53 41.5
EL10Ac1g01516 Beta vulgaris HOM05D000107 ORTHO05D000062 3.1e-06 56.2 53 39.6
Psat0s2772g0120 Pisum sativum HOM05D000107 ORTHO05D000062 3.1e-06 56.2 101 37.6
SGA_v2.0_scaffold11G05530 Striga asiatica HOM05D000107 ORTHO05D000062 3.1e-06 56.2 115 36.5
TWI79G1319 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 3.1e-06 56.2 61 39.3
Atru.chr3.1416 Acer truncatum HOM05D000107 ORTHO05D000062 5.4e-06 55.5 53 41.5
FAN10G0147 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.4e-06 55.5 114 34.2
Rhsim07G0167400 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.4e-06 55.5 53 41.5
CANSAT78G1492 Cannabis sativa HOM05D000107 ORTHO05D000062 7.0e-06 55.1 39 56.4
Rhsim01G0079200 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.0e-06 55.1 53 39.6
SGA_v2.0_scaffold251G45053 Striga asiatica HOM05D000107 ORTHO05D000062 7.0e-06 55.1 37 59.5


User provided reference genes

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