Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g09150 Schrenkiella parvula HOM05D005825 ORTHO05D006483 2.3e-179 632.1 319 100.0
Thhalv10002044m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 5.0e-166 587.8 319 93.4
Carub.0004s0696 Capsella rubella HOM05D005825 ORTHO05D006483 2.5e-165 585.5 319 92.5
AL4G19680 Arabidopsis lyrata HOM05D005825 ORTHO05D006483 8.0e-164 580.5 320 91.6
AT2G26680 Arabidopsis thaliana HOM05D005825 ORTHO05D006483 1.7e-161 572.8 320 90.6
A04p21320 Brassica napus HOM05D005825 ORTHO05D006483 8.6e-158 560.5 323 89.8
BraA04t17698Z Brassica rapa HOM05D005825 ORTHO05D006483 8.6e-158 560.5 323 89.8
C04p57230 Brassica napus HOM05D005825 ORTHO05D006483 4.7e-156 554.7 325 88.9
Thhalv10023596m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 1.8e-155 552.7 319 87.8
BolC4t27250H Brassica oleracea HOM05D005825 ORTHO05D006483 8.9e-155 550.4 325 87.7
BcaB06g28186 Brassica carinata HOM05D005825 ORTHO05D006483 1.5e-154 549.7 321 88.5
BcaC02g08209 Brassica carinata HOM05D005825 ORTHO05D006483 7.5e-154 547.4 326 87.1
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 4.5e-151 538.1 322 83.5
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 1.0e-142 510.4 325 78.2
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 3.1e-139 498.8 323 76.8
Sed0008025 Sechium edule HOM05D005825 ORTHO05D006483 2.8e-132 475.7 325 75.4
Gorai.010G064100 Gossypium raimondii HOM05D005825 ORTHO05D006483 1.5e-130 469.9 326 73.0
Duzib168G1077 Durio zibethinus HOM05D005825 ORTHO05D006483 5.8e-130 468.0 326 72.4
Gohir.D06G054601 Gossypium hirsutum HOM05D005825 ORTHO05D006483 2.2e-129 466.1 326 72.1
MELO3C004508.2 Cucumis melo HOM05D005825 ORTHO05D006483 3.7e-129 465.3 320 72.8
ClCG11G003030 Citrullus lanatus HOM05D005825 ORTHO05D006483 4.9e-129 464.9 320 73.1
Thecc.09G126400 Theobroma cacao HOM05D005825 ORTHO05D006483 6.4e-129 464.5 326 71.8
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 1.2e-127 460.3 333 70.6
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 1.6e-127 459.9 323 70.6
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 7.8e-127 457.6 322 70.2
CsaV3_2G002850 Cucumis sativus L. HOM05D005825 ORTHO05D006483 1.0e-126 457.2 320 71.9
Gohir.A06G056101 Gossypium hirsutum HOM05D005825 ORTHO05D006483 1.0e-126 457.2 328 72.3
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 6.6e-126 454.5 327 70.9
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 8.6e-126 454.1 318 70.4
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 1.5e-125 453.4 327 69.1
Hund09127 Selenicereus undatus HOM05D005825 ORTHO05D006483 1.5e-125 453.4 324 70.7
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 4.3e-125 451.8 319 72.7
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 2.8e-124 449.1 322 71.1
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 3.6e-124 448.7 320 72.2
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 8.1e-124 447.6 322 68.6
Glyma.13G167400 Glycine max HOM05D005825 ORTHO05D006483 1.1e-123 447.2 330 67.9
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 1.8e-123 446.4 330 70.0
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 2.4e-123 446.0 326 70.2
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 3.1e-123 445.7 327 68.8
Lalb_Chr13g0301881 Lupinus albus HOM05D005825 ORTHO05D006483 4.0e-123 445.3 322 69.3
Sc08g0006620 Simmondsia chinensis HOM05D005825 ORTHO05D006483 4.0e-123 445.3 328 68.0
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 5.2e-123 444.9 322 69.9
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 6.8e-123 444.5 321 68.8
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 8.9e-123 444.1 322 69.6
MBI16_g24711_MAGBIO Magnolia biondii HOM05D005825 ORTHO05D006483 8.9e-123 444.1 330 68.8
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 8.9e-123 444.1 329 70.5
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 1.2e-122 443.7 335 69.6
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 1.2e-122 443.7 321 68.8
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 1.5e-122 443.4 320 69.7
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 1.5e-122 443.4 322 68.6
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 2.0e-122 443.0 318 69.2
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 2.0e-122 443.0 321 69.8
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 4.4e-122 441.8 322 69.9
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 4.4e-122 441.8 329 68.4
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 7.6e-122 441.0 321 68.5
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 9.9e-122 440.7 321 69.2
Medtr4g114160 Medicago truncatula HOM05D005825 ORTHO05D006483 9.9e-122 440.7 322 68.3
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 9.9e-122 440.7 327 68.2
Phvul.003G164300 Phaseolus vulgaris HOM05D005825 ORTHO05D006483 2.9e-121 439.1 328 66.2
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 3.8e-121 438.7 322 69.3
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 3.8e-121 438.7 322 67.7
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 3.8e-121 438.7 327 68.2
DCAR_009187 Daucus carota HOM05D005825 ORTHO05D006483 6.4e-121 438.0 319 68.7
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 1.4e-120 436.8 325 67.1
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 1.4e-120 436.8 323 67.8
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.9e-120 436.4 323 69.3
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 1.9e-120 436.4 321 68.5
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 2.4e-120 436.0 324 69.1
Oeu007499.1 Olea europaea HOM05D005825 ORTHO05D006483 3.2e-120 435.6 331 66.8
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea HOM05D005825 ORTHO05D006483 4.2e-120 435.3 324 65.4
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea HOM05D005825 ORTHO05D006483 4.2e-120 435.3 325 65.5
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 7.1e-120 434.5 322 68.6
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 1.6e-119 433.3 322 67.4
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 2.1e-119 433.0 319 68.0
Rhsim01G0071200 Rhododendron simsii HOM05D005825 ORTHO05D006483 2.1e-119 433.0 330 67.0
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 2.1e-119 433.0 322 67.1
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 6.0e-119 431.4 282 74.5
MSTRG.19597 Avicennia marina HOM05D005825 ORTHO05D006483 7.8e-119 431.0 324 65.4
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 1.7e-118 429.9 324 66.7
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 2.3e-118 429.5 317 67.2
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 5.1e-118 428.3 317 66.9
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea HOM05D005825 ORTHO05D006483 1.5e-117 426.8 331 63.4
Lj2C942T8 Lonicera japonica HOM05D005825 ORTHO05D006483 1.5e-117 426.8 347 64.8
SalBow3G4290 Salvia bowleyana HOM05D005825 ORTHO05D006483 2.5e-117 426.0 319 65.2
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea HOM05D005825 ORTHO05D006483 1.3e-116 423.7 331 63.1
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 1.6e-116 423.3 327 64.8
VMungo1215G3451 Vigna mungo HOM05D005825 ORTHO05D006483 2.1e-116 422.9 327 64.5
Eucgr.C01173 Eucalyptus grandis HOM05D005825 ORTHO05D006483 4.8e-116 421.8 327 65.1
DCAR_017816 Daucus carota HOM05D005825 ORTHO05D006483 1.1e-115 420.6 363 62.0
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 2.0e-114 416.4 319 65.8
Lj2A929T15 Lonicera japonica HOM05D005825 ORTHO05D006483 7.6e-114 414.5 346 64.5
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 1.3e-113 413.7 322 64.3
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 6.4e-113 411.4 325 64.6
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 5.4e-112 408.3 319 66.1
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 3.5e-111 405.6 322 65.5
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 4.6e-111 405.2 323 65.0
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 6.0e-111 404.8 329 63.2
HanXRQChr17g0537731 Helianthus annuus HOM05D005825 ORTHO05D006483 7.9e-111 404.4 317 64.7
HanXRQChr17g0537711 Helianthus annuus HOM05D005825 ORTHO05D006483 4.3e-109 398.7 325 63.1
QL10p023454 Quercus lobata HOM05D005825 ORTHO05D006483 1.4e-107 393.7 498 46.4
ATR0225G021 Amborella trichopoda HOM05D005825 ORTHO05D006483 5.3e-107 391.7 265 73.6
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 9.3e-104 380.9 315 64.8
SHI03392 Sapria himalayana HOM05D005825 ORTHO05D006483 1.6e-103 380.2 388 53.6
AUR62011128 Chenopodium quinoa HOM05D005825 ORTHO05D006483 3.0e-102 375.9 325 60.9
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 1.5e-101 373.6 263 68.8
Os03g0566600 Oryza sativa ssp. japonica HOM05D005825 ORTHO05D006483 1.1e-99 367.5 283 64.3
HanXRQChr06g0180341 Helianthus annuus HOM05D005825 ORTHO05D006483 1.0e-97 360.9 288 63.9
CARHR118580 Cardamine hirsuta HOM05D005825 ORTHO05D006483 3.2e-96 355.9 200 86.5
Potri.002G119800 Populus trichocarpa HOM05D005825 ORTHO05D006483 9.0e-83 311.2 189 82.0
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 1.7e-81 307.0 264 55.7
ECA246G2031 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.2e-80 302.4 199 74.9
TPR.G10697 Trifolium pratense HOM05D005825 ORTHO05D006483 1.0e-78 297.7 183 78.7
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 6.7e-78 295.0 295 50.5
CiPaw.04G171000 Carya illinoinensis HOM05D005825 ORTHO05D006483 1.7e-76 290.4 175 80.0
Glyma.17G115000 Glycine max HOM05D005825 ORTHO05D006483 1.2e-74 284.3 176 78.4
GSVIVG01015529001 Vitis vinifera HOM05D005825 ORTHO05D006483 1.3e-73 280.8 168 81.0
Cc06_g08520 Coffea canephora HOM05D005825 ORTHO05D006483 1.4e-72 277.3 167 79.6
CARHR118590 Cardamine hirsuta HOM05D005825 ORTHO05D006483 5.5e-56 222.2 121 90.9
Ca_13270_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 8.8e-54 214.9 184 59.8
Actinidia21988 Actinidia chinensis HOM05D005825 ORTHO05D006483 7.7e-50 201.8 124 78.2
Ca_14592_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 8.5e-49 198.4 191 58.1
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 1.5e-45 187.6 162 54.3
Eucgr.G00617 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.0e-45 187.2 118 77.1
Eucgr.B02426 Eucalyptus grandis HOM05D005825 ORTHO05D006483 4.9e-44 182.6 118 74.6
Eucgr.C03225 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.6e-39 167.5 112 71.4
TAR381G0761 Trochodendron aralioides HOM05D005825 ORTHO05D006483 2.3e-38 163.7 149 57.7
Eucgr.E01840 Eucalyptus grandis HOM05D005825 ORTHO05D006483 4.6e-34 149.4 118 66.1
Eucgr.B02447 Eucalyptus grandis HOM05D005825 ORTHO05D006483 5.0e-33 146.0 95 75.8
CAN.G204.2 Capsicum annuum HOM05D005825 ORTHO05D006483 7.1e-19 99.0 73 64.4
Zm00001eb219900 Zea mays HOM05D005825 ORTHO05D006483 3.2e-11 73.6 158 32.9
VMungo0464G1687 Vigna mungo HOM05D005825 ORTHO05D006483 2.7e-10 70.5 49 67.3
MCO17G084 Micromonas commoda HOM05D051517 ORTHO05D006483 4.6e-10 69.7 186 26.3
SalBow6G2945 Salvia bowleyana HOM05D000060 ORTHO05D000082 1.3e-09 68.2 128 38.3
Cre02.g103000 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 1.7e-09 67.8 144 34.0
Cre12.g488550 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 1.5e-08 64.7 143 31.5
vmacro22117 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 2.1e-07 60.8 52 65.4
Pp3c12_8840 Physcomitrium patens HOM05D005825 ORTHO05D006483 3.6e-07 60.1 157 30.6
Cre09.g386756 Chlamydomonas reinhardtii HOM05D005825 ORTHO05D006483 6.2e-07 59.3 177 27.7
Cre09.g386747 Chlamydomonas reinhardtii HOM05D005825 ORTHO05D006483 3.1e-06 57.0 184 29.9
Cre12.g552600 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 5.2e-06 56.2 150 30.7


User provided reference genes

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