Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 7.0e-95 350.5 167 100.0
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 1.1e-79 300.1 164 88.4
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 4.3e-76 288.1 164 84.1
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 1.6e-70 269.6 164 78.0
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 2.7e-70 268.9 166 77.7
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 3.5e-70 268.5 165 76.4
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 7.8e-70 267.3 166 77.7
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 3.9e-69 265.0 165 77.6
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 3.9e-69 265.0 165 77.6
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 8.7e-69 263.8 166 76.5
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 1.1e-68 263.5 164 76.2
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 1.1e-68 263.5 165 77.0
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 2.8e-67 258.8 162 77.2
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 4.8e-67 258.1 159 78.0
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 9.9e-65 250.4 164 72.6
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 2.0e-57 226.1 163 65.0
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 1.9e-47 193.0 161 58.4
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 1.2e-46 190.3 161 57.8
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 7.9e-46 187.6 162 54.3
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 7.9e-46 187.6 155 58.1
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 1.3e-45 186.8 160 56.2
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 8.7e-45 184.1 121 71.1
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 1.5e-44 183.3 160 54.4
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 1.9e-44 183.0 145 55.9
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 4.3e-44 181.8 145 57.2
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 7.4e-44 181.0 151 57.6
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 1.3e-43 180.3 166 50.6
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 2.2e-43 179.5 160 56.2
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 2.8e-43 179.1 157 49.7
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 4.8e-43 178.3 160 56.2
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 8.2e-43 177.6 147 55.1
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 1.1e-42 177.2 168 50.6
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 1.8e-42 176.4 160 55.6
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 3.1e-42 175.6 159 51.6
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 5.3e-42 174.9 151 58.3
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 5.3e-42 174.9 162 52.5
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 6.9e-42 174.5 152 52.6
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 6.9e-42 174.5 162 50.0
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 1.2e-41 173.7 158 52.5
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 1.2e-41 173.7 163 51.5
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 1.2e-41 173.7 158 51.3
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 1.5e-41 173.3 160 51.9
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 1.5e-41 173.3 162 50.0
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 1.5e-41 173.3 148 57.4
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 2.0e-41 172.9 162 52.5
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 4.5e-41 171.8 161 49.7
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 5.9e-41 171.4 161 49.7
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 7.6e-41 171.0 160 50.0
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 1.0e-40 170.6 152 52.6
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 1.7e-40 169.9 148 51.4
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 3.8e-40 168.7 160 49.4
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 3.8e-40 168.7 159 50.9
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 5.0e-40 168.3 160 50.0
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 8.5e-40 167.5 155 49.7
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 3.2e-39 165.6 158 51.3
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 4.2e-39 165.2 159 49.7
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 5.5e-39 164.9 161 50.3
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 1.6e-38 163.3 147 52.4
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 1.6e-38 163.3 155 49.0
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 1.6e-38 163.3 161 49.7
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 1.6e-38 163.3 142 52.8
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 1.6e-38 163.3 142 52.8
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 2.1e-38 162.9 144 50.7
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 4.6e-38 161.8 147 51.7
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 4.6e-38 161.8 137 55.5
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 4.6e-38 161.8 149 53.0
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 4.6e-38 161.8 149 53.0
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 7.9e-38 161.0 148 48.0
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 1.4e-37 160.2 154 48.7
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 1.8e-37 159.8 149 52.3
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 3.0e-37 159.1 144 47.2
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 3.9e-37 158.7 158 48.1
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 3.9e-37 158.7 151 47.7
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 3.9e-37 158.7 147 51.0
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 3.9e-37 158.7 157 47.8
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 2.5e-36 156.0 154 50.0
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 4.3e-36 155.2 109 66.1
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 4.8e-35 151.8 159 45.9
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 1.1e-34 150.6 98 75.5
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 1.4e-34 150.2 160 43.1
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 5.3e-34 148.3 151 47.7
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 5.3e-34 148.3 155 46.5
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 5.3e-34 148.3 149 47.0
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 2.0e-33 146.4 155 45.2
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 2.0e-33 146.4 155 46.5
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 5.9e-33 144.8 143 47.6
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 1.3e-32 143.7 157 45.9
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 8.5e-32 141.0 157 42.7
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 3.2e-31 139.0 144 46.5
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 5.5e-31 138.3 148 46.6
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 7.2e-31 137.9 164 45.1
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 9.4e-31 137.5 136 50.7
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 1.0e-29 134.0 164 43.9
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 1.8e-29 133.3 143 42.0
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 2.3e-29 132.9 143 42.0
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 3.9e-29 132.1 150 45.3
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 2.2e-27 126.3 123 48.8
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 3.1e-26 122.5 118 50.0
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 4.1e-26 122.1 147 42.2
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 6.9e-26 121.3 168 39.3
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 9.1e-26 120.9 97 58.8
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 3.8e-24 115.5 144 41.0
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 3.2e-23 112.5 142 38.0
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 2.1e-22 109.8 138 40.6
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 4.7e-22 108.6 160 37.5
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 1.4e-21 107.1 163 35.6
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 2.2e-19 99.8 214 28.0
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 4.5e-17 92.0 74 55.4
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 9.4e-15 84.3 82 51.2
Cre08.g378100 Chlamydomonas reinhardtii HOM05D006750 ORTHO05D008426 8.8e-13 77.8 140 32.9
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 7.5e-12 74.7 150 30.0
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 1.7e-11 73.6 64 50.0
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 1.8e-10 70.1 107 33.6
Cfa010446 Carpinus fangiana HOM05D006750 ORTHO05D008426 1.1e-07 60.8 46 54.3
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 1.6e-06 57.0 86 36.0
PRCOL_00005799 Prasinoderma coloniale HOM05D006750 ORTHO05D008426 6.1e-06 55.1 133 30.8


User provided reference genes

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