Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g07760 Schrenkiella parvula HOM05D000561 ORTHO05D008162 4.1e-168 594.7 316 100.0
BcaB08g35302 Brassica carinata HOM05D000561 ORTHO05D008162 5.3e-136 488.0 316 80.7
Thhalv10001252m.g Eutrema salsugineum HOM05D000561 ORTHO05D008162 1.6e-135 486.5 316 81.6
A09p55150 Brassica napus HOM05D000561 ORTHO05D008162 4.8e-129 464.9 314 79.0
C08p38080 Brassica napus HOM05D000561 ORTHO05D008162 1.4e-128 463.4 314 78.7
CARHR050650 Cardamine hirsuta HOM05D000561 ORTHO05D008162 4.1e-128 461.8 320 77.5
BolC8t51383H Brassica oleracea HOM05D000561 ORTHO05D008162 7.0e-128 461.1 314 78.3
BraA09t40923Z Brassica rapa HOM05D000561 ORTHO05D008162 1.6e-127 459.9 314 78.3
AT2G26540 Arabidopsis thaliana HOM05D000561 ORTHO05D008162 2.5e-125 452.6 312 78.5
AL4G19400 Arabidopsis lyrata HOM05D000561 ORTHO05D008162 5.5e-125 451.4 310 77.4
Carub.0003s2738 Capsella rubella HOM05D000561 ORTHO05D008162 8.0e-124 447.6 308 76.0
BcaC07g40815 Brassica carinata HOM05D000561 ORTHO05D008162 1.4e-123 446.8 314 75.8
Aa31LG10G9880 Aethionema arabicum HOM05D000561 ORTHO05D008162 1.5e-117 426.8 311 72.0
THA.LOC104803685 Tarenaya hassleriana HOM05D000561 ORTHO05D008162 4.9e-105 385.2 254 74.4
Potri.014G034700 Populus trichocarpa HOM05D000561 ORTHO05D008162 1.9e-101 373.2 304 64.8
Atru.chr13.629 Acer truncatum HOM05D000561 ORTHO05D008162 2.8e-100 369.4 256 69.5
Atru.chr13.633 Acer truncatum HOM05D000561 ORTHO05D008162 2.8e-100 369.4 256 69.5
Psat5g044440 Pisum sativum HOM05D000561 ORTHO05D008162 1.8e-99 366.7 288 64.6
Gohir.D05G203500 Gossypium hirsutum HOM05D000561 ORTHO05D008162 1.2e-98 364.0 308 63.0
Duzib116G0222 Durio zibethinus HOM05D000561 ORTHO05D008162 1.5e-98 363.6 312 61.9
Prupe.1G440800 Prunus persica HOM05D000561 ORTHO05D008162 2.0e-98 363.2 300 65.7
RcHm_v2.0_Chr6g0307161 Rosa chinensis HOM05D000561 ORTHO05D008162 4.4e-98 362.1 303 64.0
TPR.G10521 Trifolium pratense HOM05D000561 ORTHO05D008162 2.2e-97 359.8 313 60.7
MD08G1106500 Malus domestica HOM05D000561 ORTHO05D008162 4.9e-97 358.6 297 62.6
MD15G1087100 Malus domestica HOM05D000561 ORTHO05D008162 4.9e-97 358.6 303 62.4
Lalb_Chr08g0245641 Lupinus albus HOM05D000561 ORTHO05D008162 6.4e-97 358.2 255 69.8
TAR628G0509 Trochodendron aralioides HOM05D000561 ORTHO05D008162 6.4e-97 358.2 282 63.1
Lj1g0015016 Lotus japonicus HOM05D000561 ORTHO05D008162 8.3e-97 357.8 257 68.5
Gorai.009G209500 Gossypium raimondii HOM05D000561 ORTHO05D008162 1.1e-96 357.5 309 62.5
Medtr3g101350 Medicago truncatula HOM05D000561 ORTHO05D008162 1.1e-96 357.5 303 61.4
Nn5g30201 Nelumbo nucifera HOM05D000561 ORTHO05D000514 1.1e-96 357.5 252 69.8
Gohir.A05G200200 Gossypium hirsutum HOM05D000561 ORTHO05D008162 1.4e-96 357.1 308 62.0
QL02p005893 Quercus lobata HOM05D000561 ORTHO05D008162 1.4e-96 357.1 310 62.3
Ciclev10001965m.g Citrus clementina HOM05D000561 ORTHO05D008162 1.9e-96 356.7 248 71.4
CiPaw.16G047800 Carya illinoinensis HOM05D000561 ORTHO05D008162 5.4e-96 355.1 250 70.4
arahy.Tifrunner.gnm1.ann1.YYC1CT Arachis hypogaea HOM05D000561 ORTHO05D008162 1.2e-95 354.0 257 68.5
GSVIVG01009559001 Vitis vinifera HOM05D000561 ORTHO05D008162 1.2e-95 354.0 306 61.8
Sabra14G0024600 Salix brachista HOM05D000561 ORTHO05D008162 1.6e-95 353.6 297 65.0
TAR625G0340 Trochodendron aralioides HOM05D000561 ORTHO05D008162 2.1e-95 353.2 280 63.2
Duzib093G1567 Durio zibethinus HOM05D000561 ORTHO05D008162 2.7e-95 352.8 308 61.4
CSS0036187 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D008162 1.7e-94 350.1 255 67.8
Manes.05G170800 Manihot esculenta HOM05D000561 ORTHO05D008162 1.7e-94 350.1 278 65.5
Dinv39338 Davidia involucrata HOM05D000561 ORTHO05D008162 8.6e-94 347.8 288 61.8
PSO541G5839 Papaver somniferum HOM05D000561 ORTHO05D008162 8.6e-94 347.8 256 67.6
Cc10_g03990 Coffea canephora HOM05D000561 ORTHO05D008162 1.5e-93 347.1 268 64.6
Hma1.2p1_0260F.1_g104740 Hydrangea macrophylla HOM05D000561 ORTHO05D008162 1.9e-93 346.7 309 57.3
PSO675G5921 Papaver somniferum HOM05D000561 ORTHO05D008162 2.5e-93 346.3 256 67.2
FAN27G1876 Fragaria x ananassa HOM05D000561 ORTHO05D008162 5.6e-93 345.1 293 63.8
TWI56G0230 Tripterygium wilfordii HOM05D000561 ORTHO05D008162 1.2e-92 344.0 251 68.9
Actinidia22609 Actinidia chinensis HOM05D000561 ORTHO05D008162 2.8e-92 342.8 313 59.7
Haze_17567 Corylus avellana HOM05D000561 ORTHO05D008162 2.8e-92 342.8 296 63.2
CAN.G371.47 Capsicum annuum HOM05D000561 ORTHO05D008162 1.4e-91 340.5 311 57.9
ClCG08G015630 Citrullus lanatus HOM05D000561 ORTHO05D008162 2.4e-91 339.7 302 59.6
Ca_15966_v3 Cicer arietinum L. HOM05D000561 ORTHO05D008162 6.8e-91 338.2 254 67.3
Sed0001510 Sechium edule HOM05D000561 ORTHO05D008162 8.9e-91 337.8 268 63.1
FvH4_2g34880 Fragaria vesca HOM05D000561 ORTHO05D008162 1.2e-90 337.4 279 65.9
Os03g0186100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D008162 2.0e-90 336.7 247 64.8
Glyma.06G037300 Glycine max HOM05D000561 ORTHO05D008162 2.6e-90 336.3 248 66.9
Phvul.009G063100 Phaseolus vulgaris HOM05D000561 ORTHO05D008162 2.6e-90 336.3 301 58.8
Solyc04g079320.4 Solanum lycopersicum HOM05D000561 ORTHO05D008162 5.8e-90 335.1 252 64.7
Sopen04g032930 Solanum pennellii HOM05D000561 ORTHO05D008162 5.8e-90 335.1 252 64.7
COL.COLO4_26457 Corchorus olitorius HOM05D000561 ORTHO05D008162 7.6e-90 334.7 230 69.6
Thecc.08G013400 Theobroma cacao HOM05D000561 ORTHO05D008162 9.9e-90 334.3 297 61.3
Carub.0004s0671 Capsella rubella HOM05D000561 ORTHO05D008162 1.7e-89 333.6 317 64.7
vmacro21557 Vaccinium macrocarpon HOM05D000561 ORTHO05D008162 2.2e-89 333.2 253 66.0
CsaV3_2G028140 Cucumis sativus L. HOM05D000561 ORTHO05D008162 3.8e-89 332.4 250 65.6
MELO3C010892.2 Cucumis melo HOM05D000561 ORTHO05D008162 6.4e-89 331.6 289 59.9
CDE06G2652 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 1.9e-88 330.1 275 61.1
Aqoxy6G01386 Aquilegia oxysepala HOM05D000561 ORTHO05D008162 5.4e-88 328.6 251 64.1
MBI06_g08185_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D008162 1.2e-87 327.4 285 58.6
Nitab4.5_0005549g0040 Nicotiana tabacum HOM05D000561 ORTHO05D008162 1.2e-87 327.4 236 68.2
HanXRQChr02g0038741 Helianthus annuus HOM05D000561 ORTHO05D008162 1.6e-87 327.0 274 60.6
Rhsim06G0046600 Rhododendron simsii HOM05D000561 ORTHO05D008162 2.1e-87 326.6 306 57.5
Nitab4.5_0000068g0440 Nicotiana tabacum HOM05D000561 ORTHO05D008162 3.5e-87 325.9 236 67.8
Zm00001eb006450 Zea mays HOM05D000561 ORTHO05D008162 3.5e-87 325.9 247 64.0
Manes.18G034000 Manihot esculenta HOM05D000561 ORTHO05D008162 4.6e-87 325.5 285 61.8
DCAR_019467 Daucus carota HOM05D000561 ORTHO05D008162 7.8e-87 324.7 250 62.8
ECA232G0584 Erigeron canadensis HOM05D000561 ORTHO05D008162 1.0e-86 324.3 248 63.3
HanXRQChr09g0268001 Helianthus annuus HOM05D000561 ORTHO05D008162 1.7e-86 323.6 248 64.5
Migut.C00604 Erythranthe guttata HOM05D000561 ORTHO05D008162 3.0e-86 322.8 252 63.5
MSTRG.1332 Avicennia marina HOM05D000561 ORTHO05D008162 3.9e-86 322.4 256 61.3
Sabra02G0100300 Salix brachista HOM05D000561 ORTHO05D008162 1.5e-85 320.5 282 61.7
Eucgr.F02370 Eucalyptus grandis HOM05D000561 ORTHO05D008162 1.9e-85 320.1 233 66.5
Lsat_1_v5_gn_4_124200 Lactuca sativa HOM05D000561 ORTHO05D008162 1.3e-84 317.4 304 56.9
Lsat_1_v5_gn_1_20480 Lactuca sativa HOM05D000561 ORTHO05D008162 1.1e-83 314.3 274 59.1
Peaxi162Scf00566g00219 Petunia axillaris HOM05D000561 ORTHO05D008162 1.4e-83 313.9 241 66.8
PGR031G3300 Punica granatum HOM05D000561 ORTHO05D008162 4.4e-82 308.9 293 58.0
EL10Ac1g01805 Beta vulgaris HOM05D000561 ORTHO05D008162 7.6e-82 308.1 301 55.1
Migut.O00512 Erythranthe guttata HOM05D000561 ORTHO05D008162 2.2e-81 306.6 349 48.7
HPP92_011186 Vanilla planifolia HOM05D000561 ORTHO05D008162 2.2e-81 306.6 322 51.9
ATR0087G004 Amborella trichopoda HOM05D000561 ORTHO05D008162 2.1e-79 300.1 228 64.0
SGA_v2.0_scaffold71G24043 Striga asiatica HOM05D000561 ORTHO05D008162 3.5e-79 299.3 262 59.9
FAN20G2490 Fragaria x ananassa HOM05D000561 ORTHO05D008162 1.0e-78 297.7 382 48.7
SalBow7G2378 Salvia bowleyana HOM05D000561 ORTHO05D008162 3.9e-78 295.8 335 48.4
Hund26617 Selenicereus undatus HOM05D000561 ORTHO05D008162 2.8e-76 289.7 429 43.1
VMungo1309G1588 Vigna mungo HOM05D000561 ORTHO05D008162 2.6e-74 283.1 231 61.9
AagrBONN_evm.TU.Sc2ySwM_228.1283 Anthoceros agrestis HOM05D000561 ORTHO05D008162 1.6e-71 273.9 243 55.6
Pp3c9_18350 Physcomitrium patens HOM05D000561 ORTHO05D008162 2.1e-71 273.5 246 52.8
Cpa.g.sc64.2 Carica papaya HOM05D000561 ORTHO05D008162 8.7e-70 268.1 188 71.8
Ah.06g192790 Amaranthus hybridus HOM05D000561 ORTHO05D008162 1.6e-68 263.8 321 48.3
Mapoly0101s0072 Marchantia polymorpha HOM05D000561 ORTHO05D008162 1.1e-67 261.2 245 53.1
Lj4A51T47 Lonicera japonica HOM05D000561 ORTHO05D008162 2.4e-67 260.0 190 67.4
Glyma.04G037000 Glycine max HOM05D000561 ORTHO05D008162 1.5e-66 257.3 194 66.0
AUR62022458 Chenopodium quinoa HOM05D000561 ORTHO05D008162 3.4e-66 256.1 249 57.4
SHI08313 Sapria himalayana HOM05D000561 ORTHO05D008162 3.4e-66 256.1 252 53.6
SEGI_40608 Sequoiadendron giganteum HOM05D000561 ORTHO05D008162 8.7e-62 241.5 212 55.2
ECA247G1201 Erigeron canadensis HOM05D000561 ORTHO05D000514 7.4e-61 238.4 198 58.1
SMO367G0032 Selaginella moellendorffii HOM05D000561 ORTHO05D008162 4.8e-60 235.7 234 50.4
CBR_g12178 Chara braunii HOM05D000561 ORTHO05D008162 3.2e-56 223.0 273 44.3
AUR62040067 Chenopodium quinoa HOM05D000561 ORTHO05D008162 3.2e-56 223.0 307 45.3
Sc26g0003980 Simmondsia chinensis HOM05D000561 ORTHO05D008162 1.4e-51 207.6 162 66.0
CDE10G0258 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 4.1e-51 206.1 171 60.8
Cre09.g409100 Chlamydomonas reinhardtii HOM05D000561 ORTHO05D008162 4.1e-51 206.1 278 42.8
arahy.Tifrunner.gnm1.ann1.96H4RR Arachis hypogaea HOM05D000561 ORTHO05D008162 1.7e-49 200.7 142 70.4
Migut.N02692 Erythranthe guttata HOM05D000561 ORTHO05D008162 1.4e-48 197.6 180 57.8
MCO15G161 Micromonas commoda HOM05D000561 ORTHO05D008162 3.0e-46 189.9 283 40.3
PRCOL_00005348 Prasinoderma coloniale HOM05D000561 ORTHO05D008162 1.5e-45 187.6 248 41.9
unitig_32.g11128 Utricularia gibba HOM05D000561 ORTHO05D008162 1.4e-40 171.0 142 57.7
Lsat_1_v5_gn_2_45600 Lactuca sativa HOM05D000561 ORTHO05D008162 1.8e-35 154.1 203 44.3
SGA_v2.0_scaffold217G42442 Striga asiatica HOM05D000561 ORTHO05D008162 3.1e-35 153.3 119 66.4
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 8.8e-30 135.2 163 47.2
SGA_v2.0_scaffold217G42441 Striga asiatica HOM05D000561 ORTHO05D008162 1.3e-20 104.8 77 62.3
Lsat_1_v5_gn_5_39421 Lactuca sativa HOM05D000487 ORTHO05D048384 1.2e-18 98.2 79 55.7


User provided reference genes

Program Settings