Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g07720 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.6e-51 205.7 98 100.0
Sp7g09270 Schrenkiella parvula HOM05D000004 ORTHO05D000002 2.6e-17 92.0 100 51.0
A09p01570 Brassica napus HOM05D000004 ORTHO05D000002 1.0e-16 90.1 106 47.2
SpUn0451_0010 Schrenkiella parvula HOM05D000004 ORTHO05D000002 3.8e-16 88.2 65 64.6
Sp4g07920 Schrenkiella parvula HOM05D000004 ORTHO05D000002 2.5e-15 85.5 106 45.3
SpUn0043_0020 Schrenkiella parvula HOM05D000004 ORTHO05D000002 4.2e-15 84.7 100 47.0
SpUn0045_0010 Schrenkiella parvula HOM05D000004 ORTHO05D000002 4.2e-15 84.7 100 47.0
Sp4g07840 Schrenkiella parvula HOM05D000399 ORTHO05D000002 5.5e-15 84.3 65 63.1
Ah.13g069290 Amaranthus hybridus HOM05D000004 ORTHO05D000002 2.8e-11 72.0 98 35.7
Sp4g07670 Schrenkiella parvula HOM05D000691 ORTHO05D000378 3.7e-11 71.6 63 52.4
CSS0037139 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.8e-10 69.3 64 46.9
CiPaw.04G042200 Carya illinoinensis HOM05D000004 ORTHO05D000002 1.8e-10 69.3 97 36.1
SpUn0003_0110 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.8e-10 69.3 56 58.9
CsaV3_5G023160 Cucumis sativus L. HOM05D001517 ORTHO05D001424 3.1e-10 68.6 97 34.0
Sopen12g008510 Solanum pennellii HOM05D000691 ORTHO05D000378 3.1e-10 68.6 65 46.2
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 4.1e-10 68.2 100 36.0
CSS0004339 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.4e-10 67.8 62 48.4
CsaV3_1G028570 Cucumis sativus L. HOM05D000004 ORTHO05D000002 5.4e-10 67.8 97 34.0
CsaV3_1G031080 Cucumis sativus L. HOM05D000691 ORTHO05D000378 5.4e-10 67.8 97 34.0
CsaV3_5G014110 Cucumis sativus L. HOM05D003698 ORTHO05D004320 5.4e-10 67.8 97 34.0
CsaV3_5G018680 Cucumis sativus L. HOM05D000052 ORTHO05D000046 5.4e-10 67.8 97 34.0
CsaV3_UNG167280 Cucumis sativus L. HOM05D013071 ORTHO05D016268 5.4e-10 67.8 97 34.0
Sopen07g018230 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-09 66.6 81 40.7
CsaV3_UNG167240 Cucumis sativus L. HOM05D011462 ORTHO05D014612 1.6e-09 66.2 97 34.0
Sopen04g014250 Solanum pennellii HOM05D000004 ORTHO05D000378 2.0e-09 65.9 98 35.7
Ah.15g100080 Amaranthus hybridus HOM05D000004 ORTHO05D000002 2.7e-09 65.5 65 44.6
Sopen00g013620 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-09 65.5 65 44.6
Sopen04g010080 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-09 65.5 65 44.6
Sopen09g023520 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-09 65.5 65 44.6
Sopen12g018380 Solanum pennellii HOM05D000691 ORTHO05D000378 2.7e-09 65.5 65 44.6
Sopen07g013260 Solanum pennellii HOM05D000691 ORTHO05D000378 3.5e-09 65.1 98 33.7
Sopen08g019200 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-09 65.1 105 35.2
Sopen05g009900 Solanum pennellii HOM05D000004 ORTHO05D000002 4.5e-09 64.7 105 36.2
Sopen05g011340 Solanum pennellii HOM05D000004 ORTHO05D000002 4.5e-09 64.7 65 43.1
Sopen10g020660 Solanum pennellii HOM05D000004 ORTHO05D000002 4.5e-09 64.7 65 43.1
PGSC0003DMG400000388 Solanum tuberosum HOM05D000004 ORTHO05D000002 4.5e-09 64.7 98 35.7
EL10As7g23735 Beta vulgaris HOM05D000004 ORTHO05D000002 5.9e-09 64.3 65 44.6
EL10As7g23737 Beta vulgaris HOM05D000004 ORTHO05D000002 5.9e-09 64.3 65 44.6
ClCG10G007950 Citrullus lanatus HOM05D000004 ORTHO05D000002 5.9e-09 64.3 97 37.1
Sopen01g011390 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-09 64.3 63 47.6
Sopen02g010330 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-09 64.3 63 47.6
CsaV3_6G022400 Cucumis sativus L. HOM05D001503 ORTHO05D003820 7.7e-09 63.9 64 42.2
Sopen02g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-09 63.9 63 46.0
Sopen03g025570 Solanum pennellii HOM05D000290 ORTHO05D007356 7.7e-09 63.9 77 42.9
Sopen03g033370 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-09 63.9 63 46.0
Sopen04g020730 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-09 63.9 63 46.0
Sopen05g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-09 63.9 63 46.0
Sopen05g026540 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-09 63.9 63 46.0
Sopen07g017800 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-09 63.9 63 46.0
Sopen07g025250 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-09 63.9 63 46.0
Sopen10g005990 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-09 63.9 63 46.0
Sopen11g022600 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-09 63.9 63 46.0
Sopen12g024530 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-09 63.9 63 46.0
Sopen07g015160 Solanum pennellii HOM05D000691 ORTHO05D000378 1.0e-08 63.5 65 43.1
Sopen09g023470 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-08 63.5 63 46.0
Sopen04g026810 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-08 63.2 64 45.3
Sopen05g005120 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-08 63.2 100 37.0
Sopen08g004730 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-08 63.2 65 43.1
FvH4_1g23712 Fragaria vesca HOM05D000004 ORTHO05D000002 1.7e-08 62.8 63 44.4
FvH4_1g29809 Fragaria vesca HOM05D000004 ORTHO05D000002 1.7e-08 62.8 63 44.4
Sopen05g028570 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-08 62.8 95 35.8
ClCG08G000140 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.2e-08 62.4 97 39.2
Sopen03g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-08 62.4 63 46.0
Sopen06g016840 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-08 62.4 65 40.0
Sopen07g016960 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-08 62.4 63 46.0
Sopen08g005590 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-08 62.4 63 46.0
Sopen12g017890 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-08 62.4 63 46.0
Sopen09g009570 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-08 62.0 98 36.7
Sopen07g006330 Solanum pennellii HOM05D000004 ORTHO05D000002 3.8e-08 61.6 100 37.0
Sopen11g014650 Solanum pennellii HOM05D000004 ORTHO05D000002 3.8e-08 61.6 63 44.4
Sopen11g019750 Solanum pennellii HOM05D000004 ORTHO05D000002 3.8e-08 61.6 61 45.9
Sopen01g026700 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.2 65 41.5
Sopen04g016000 Solanum pennellii HOM05D000004 ORTHO05D000378 5.0e-08 61.2 65 40.0
CsaV3_4G021860 Cucumis sativus L. HOM05D000691 ORTHO05D000378 6.5e-08 60.8 64 39.1
Sopen00g001810 Solanum pennellii HOM05D000004 ORTHO05D000002 6.5e-08 60.8 65 40.0
Sopen02g008090 Solanum pennellii HOM05D000004 ORTHO05D000002 6.5e-08 60.8 100 36.0
Sopen02g010300 Solanum pennellii HOM05D000004 ORTHO05D000002 6.5e-08 60.8 100 37.0
Sopen04g014160 Solanum pennellii HOM05D000004 ORTHO05D000002 6.5e-08 60.8 64 43.8
Sopen05g029610 Solanum pennellii HOM05D000004 ORTHO05D000002 6.5e-08 60.8 63 44.4
Sopen11g021550 Solanum pennellii HOM05D000004 ORTHO05D000002 6.5e-08 60.8 63 46.0
THA.LOC104816062 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 6.5e-08 60.8 96 34.4
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 8.5e-08 60.5 106 30.2
Sopen02g009460 Solanum pennellii HOM05D000691 ORTHO05D000378 8.5e-08 60.5 100 37.0
Sopen07g009500 Solanum pennellii HOM05D001275 ORTHO05D001570 8.5e-08 60.5 65 40.0
Sopen04g017030 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-07 60.1 100 36.0
Sopen07g017950 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-07 60.1 63 44.4
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 1.5e-07 59.7 106 30.2
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 1.5e-07 59.7 106 30.2
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 1.5e-07 59.7 106 30.2
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 1.5e-07 59.7 106 30.2
Sopen12g011100 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-07 59.7 95 31.6
Sopen01g025050 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-07 59.3 63 44.4
Sopen12g015040 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-07 59.3 63 42.9
EL10As7g23739 Beta vulgaris HOM05D000004 ORTHO05D000002 2.5e-07 58.9 65 41.5
Manes.S035016 Manihot esculenta HOM05D000004 ORTHO05D000002 2.5e-07 58.9 97 34.0
Sopen02g007870 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-07 58.9 65 40.0
Sopen02g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-07 58.9 100 36.0
Sopen02g010830 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-07 58.5 100 36.0
Sopen02g011110 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-07 58.5 100 35.0
Manes.03G108966 Manihot esculenta HOM05D000004 ORTHO05D000002 4.2e-07 58.2 65 38.5
Sopen06g010510 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-07 58.2 63 41.3
Sopen06g011880 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-07 58.2 100 35.0
Atru.chr8.283 Acer truncatum HOM05D000004 ORTHO05D000002 5.5e-07 57.8 61 42.6
Manes.15G121750 Manihot esculenta HOM05D000004 ORTHO05D000002 5.5e-07 57.8 64 40.6
Potri.004G014401 Populus trichocarpa HOM05D000004 ORTHO05D000002 5.5e-07 57.8 98 31.6
Sopen02g006770 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-07 57.8 66 43.9
SHI22221 Sapria himalayana HOM05D000004 ORTHO05D000002 9.4e-07 57.0 62 38.7
CAN.G1226.33 Capsicum annuum HOM05D000004 ORTHO05D000002 1.2e-06 56.6 66 42.4
CAN.G1250.3 Capsicum annuum HOM05D000004 ORTHO05D000002 1.2e-06 56.6 66 42.4
CAN.G1445.1 Capsicum annuum HOM05D000004 ORTHO05D000002 1.2e-06 56.6 66 42.4
CAN.G55.5 Capsicum annuum HOM05D000004 ORTHO05D000002 1.2e-06 56.6 66 42.4
CAN.G801.8 Capsicum annuum HOM05D000004 ORTHO05D000002 1.2e-06 56.6 66 42.4
CAN.G890.31 Capsicum annuum HOM05D000004 ORTHO05D000002 1.2e-06 56.6 66 42.4
Manes.12G101375 Manihot esculenta HOM05D000004 ORTHO05D000002 1.2e-06 56.6 98 30.6
Sopen07g006780 Solanum pennellii HOM05D000014 ORTHO05D000002 1.2e-06 56.6 65 40.0
AUR62035181 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.1e-06 55.8 61 41.0
Manes.14G045351 Manihot esculenta HOM05D000004 ORTHO05D000002 2.1e-06 55.8 98 31.6
Sopen05g016250 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-06 55.8 63 42.9
Sopen10g014200 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-06 55.8 100 35.0
BcaC07g38003 Brassica carinata HOM05D000004 ORTHO05D000002 2.7e-06 55.5 86 37.2
Sopen07g011130 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-06 55.5 63 42.9
PGR142G0242 Punica granatum HOM05D000004 ORTHO05D000002 3.6e-06 55.1 62 37.1
SHI25082 Sapria himalayana HOM05D000004 ORTHO05D000002 3.6e-06 55.1 62 40.3
CAN.G500.93 Capsicum annuum HOM05D000004 ORTHO05D000002 4.7e-06 54.7 66 40.9
Manes.10G081651 Manihot esculenta HOM05D000004 ORTHO05D000002 4.7e-06 54.7 65 38.5
Sopen08g015300 Solanum pennellii HOM05D000004 ORTHO05D000002 4.7e-06 54.7 95 33.7
Sopen10g013720 Solanum pennellii HOM05D000004 ORTHO05D000002 4.7e-06 54.7 58 44.8
Sopen10g015090 Solanum pennellii HOM05D000004 ORTHO05D000002 4.7e-06 54.7 55 43.6
Sp4g07530 Schrenkiella parvula HOM05D000691 ORTHO05D000378 6.1e-06 54.3 46 54.3


User provided reference genes

Program Settings