Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 1.6e-178 629.4 331 100.0
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 7.8e-162 573.9 331 92.4
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 1.7e-156 556.2 334 88.9
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 3.7e-156 555.1 333 88.9
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 6.4e-156 554.3 334 88.6
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 2.7e-154 548.9 333 89.8
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 6.6e-153 544.3 333 89.8
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 2.1e-151 539.3 337 88.4
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 2.1e-143 512.7 352 79.3
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 8.1e-143 510.8 345 82.9
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 5.1e-137 491.5 331 79.2
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 2.0e-125 453.0 332 73.8
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 6.6e-121 438.0 326 73.9
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 1.1e-120 437.2 331 72.8
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 2.1e-119 433.0 326 72.4
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 2.8e-119 432.6 328 72.3
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 1.8e-118 429.9 327 72.5
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 2.4e-118 429.5 337 72.1
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 5.3e-118 428.3 331 71.0
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 7.6e-117 424.5 331 72.5
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 2.4e-115 419.5 332 69.3
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 3.2e-115 419.1 323 70.9
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 7.1e-115 417.9 288 76.4
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 1.2e-114 417.2 261 82.4
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 1.6e-114 416.8 323 70.6
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 2.1e-114 416.4 331 68.0
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 2.7e-114 416.0 268 80.2
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 6.0e-114 414.8 331 68.9
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 1.0e-113 414.1 333 69.1
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.8e-113 413.3 331 68.6
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 2.3e-113 412.9 331 68.9
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 6.7e-113 411.4 331 68.3
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 6.7e-113 411.4 333 70.0
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 8.7e-113 411.0 325 69.5
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 1.1e-112 410.6 328 68.6
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 1.5e-112 410.2 308 72.1
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.9e-112 409.8 321 70.7
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 4.3e-112 408.7 325 67.1
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 7.4e-112 407.9 336 67.0
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 3.7e-111 405.6 331 67.1
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 6.2e-111 404.8 297 71.7
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.8e-110 403.3 332 65.7
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 1.8e-110 403.3 291 72.5
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 4.0e-110 402.1 297 74.4
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 9.0e-110 401.0 334 67.4
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 2.0e-109 399.8 315 67.0
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 2.6e-109 399.4 336 66.1
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 3.4e-109 399.1 260 75.8
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 3.4e-109 399.1 331 66.8
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 1.0e-108 397.5 261 76.6
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.3e-108 397.1 335 66.0
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 1.3e-108 397.1 320 66.2
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 3.8e-108 395.6 322 67.4
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 6.5e-108 394.8 323 66.3
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 1.4e-107 393.7 261 78.2
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 2.5e-107 392.9 261 76.2
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 3.2e-107 392.5 321 66.0
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 5.5e-107 391.7 339 64.0
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 7.1e-107 391.3 332 66.0
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 1.6e-106 390.2 320 66.2
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 2.7e-106 389.4 339 63.1
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 7.9e-106 387.9 311 68.2
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.8e-105 386.7 322 65.8
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 5.1e-105 385.2 250 80.4
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 6.7e-105 384.8 249 78.3
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 6.7e-105 384.8 353 62.0
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 1.1e-104 384.0 325 66.2
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 2.5e-104 382.9 322 64.9
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 4.3e-104 382.1 331 65.3
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 1.3e-103 380.6 292 71.2
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 1.6e-103 380.2 316 64.6
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 2.8e-103 379.4 331 65.9
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 8.2e-103 377.9 319 64.3
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.1e-102 377.5 316 65.2
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 1.4e-102 377.1 324 63.9
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 3.1e-102 375.9 333 63.1
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 3.1e-102 375.9 324 64.8
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 3.1e-102 375.9 312 65.7
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 4.1e-102 375.6 333 64.0
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 5.3e-102 375.2 311 66.2
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 6.9e-102 374.8 236 80.5
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 7.2e-99 364.8 334 62.6
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 1.6e-98 363.6 238 76.9
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 1.6e-98 363.6 335 61.5
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 1.3e-95 354.0 289 65.7
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.4e-94 349.7 250 72.8
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 5.3e-94 348.6 259 69.1
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 1.1e-91 340.9 269 66.9
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 3.2e-91 339.3 265 67.2
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 3.6e-90 335.9 221 74.7
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 6.1e-90 335.1 252 72.2
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 5.1e-89 332.0 328 57.6
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 8.2e-87 324.7 235 70.6
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 1.1e-86 324.3 276 64.5
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 2.6e-85 319.7 337 57.3
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 3.1e-78 296.2 216 64.8
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 5.3e-78 295.4 255 65.1
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 2.6e-77 293.1 222 70.3
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 5.0e-76 288.9 260 56.9
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.9e-75 287.0 191 77.5
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 1.0e-73 281.2 268 53.7
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 2.8e-71 273.1 260 53.8
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 1.8e-70 270.4 266 59.8
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.1e-62 244.6 250 51.6
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.0e-61 240.4 275 46.5
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 6.5e-60 235.3 269 48.7
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 9.5e-59 231.5 248 52.0
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 5.2e-57 225.7 252 48.0
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.3e-52 211.1 129 83.7
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 4.7e-50 202.6 251 43.4
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 1.6e-45 187.6 244 45.1
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.7e-44 184.1 168 63.1
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 4.7e-42 176.0 246 40.2
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 1.2e-37 161.4 126 66.7
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 6.2e-26 122.5 244 29.9
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 1.9e-22 110.9 288 35.1
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 7.8e-21 105.5 253 32.0
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 2.4e-06 57.4 52 53.8


User provided reference genes

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