Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g04570 Schrenkiella parvula HOM05D000112 ORTHO05D017602 2.2e-70 268.9 136 100.0
Sp4g04480 Schrenkiella parvula HOM05D000112 ORTHO05D019361 1.1e-26 123.6 119 59.7
Thhalv10029379m.g Eutrema salsugineum HOM05D000112 ORTHO05D010432 8.5e-22 107.5 134 47.0
AL1G51110 Arabidopsis lyrata HOM05D000112 ORTHO05D010432 1.1e-18 97.1 124 50.0
Sp6g06600 Schrenkiella parvula HOM05D000112 ORTHO05D019361 1.9e-18 96.3 130 47.7
AL3G50500 Arabidopsis lyrata HOM05D000112 ORTHO05D000564 1.1e-16 90.5 125 48.0
Sp6g08360 Schrenkiella parvula HOM05D000112 ORTHO05D019361 9.1e-16 87.4 126 44.4
SpUn0752_0010 Schrenkiella parvula HOM05D000112 ORTHO05D019361 9.1e-16 87.4 134 41.8
BcaC04g21296 Brassica carinata HOM05D000112 ORTHO05D017602 3.4e-15 85.5 127 40.9
C09p33430 Brassica napus HOM05D000112 ORTHO05D017602 5.9e-15 84.7 127 40.9
BolC9t56180H Brassica oleracea HOM05D000112 ORTHO05D017602 5.9e-15 84.7 127 40.9
AL1G48670 Arabidopsis lyrata HOM05D000112 ORTHO05D000564 2.2e-14 82.8 122 43.4
AL1G49840 Arabidopsis lyrata HOM05D000112 ORTHO05D000564 2.2e-14 82.8 114 50.0
BcaB02g07711 Brassica carinata HOM05D000112 ORTHO05D010432 3.8e-14 82.0 123 41.5
A06p19980 Brassica napus HOM05D000112 ORTHO05D010432 5.0e-14 81.6 123 39.8
BraA06t25084Z Brassica rapa HOM05D000112 ORTHO05D010432 5.0e-14 81.6 123 39.8
AL1G48960 Arabidopsis lyrata HOM05D000112 ORTHO05D000564 6.5e-14 81.3 107 50.5
Sp6g08860 Schrenkiella parvula HOM05D000112 ORTHO05D019361 6.5e-14 81.3 128 40.6
BraA09t38201Z Brassica rapa HOM05D000112 ORTHO05D017602 8.5e-14 80.9 127 37.8
BolC3t19489H Brassica oleracea HOM05D000112 ORTHO05D032741 3.2e-13 79.0 118 40.7
BcaC01g01791 Brassica carinata HOM05D000112 ORTHO05D010432 4.2e-13 78.6 123 39.8
C07p26620 Brassica napus HOM05D000112 ORTHO05D017602 4.2e-13 78.6 123 40.7
BolC3t19476H Brassica oleracea HOM05D000112 ORTHO05D010432 5.5e-13 78.2 123 39.8
Sp6g08230 Schrenkiella parvula HOM05D000112 ORTHO05D019361 1.2e-12 77.0 120 44.2
AT1G34170 Arabidopsis thaliana HOM05D000112 ORTHO05D000564 1.6e-12 76.6 103 47.6
BcaB01g01712 Brassica carinata HOM05D000112 ORTHO05D010432 2.1e-12 76.3 123 37.4
Thhalv10029161m.g Eutrema salsugineum HOM05D000112 ORTHO05D000564 2.7e-12 75.9 123 40.7
BolC7t43189H Brassica oleracea HOM05D000112 ORTHO05D010432 3.6e-12 75.5 123 39.0
BcaC06g31662 Brassica carinata HOM05D000112 ORTHO05D010432 1.4e-11 73.6 119 41.2
Thhalv10029399m.g Eutrema salsugineum HOM05D000112 ORTHO05D000564 1.4e-11 73.6 101 43.6
BcaC06g31537 Brassica carinata HOM05D000112 ORTHO05D010432 1.8e-11 73.2 118 38.1
BraA09t35939Z Brassica rapa HOM05D000112 ORTHO05D010432 2.3e-11 72.8 83 43.4
AT1G35540 Arabidopsis thaliana HOM05D000112 ORTHO05D000564 3.0e-11 72.4 125 43.2
AT1G34390 Arabidopsis thaliana HOM05D000112 ORTHO05D000564 5.1e-11 71.6 124 41.9
A09p02960 Brassica napus HOM05D000112 ORTHO05D010432 5.1e-11 71.6 81 43.2
BcaB04g18806 Brassica carinata HOM05D000112 ORTHO05D010432 6.7e-11 71.2 118 39.0
BcaC02g11532 Brassica carinata HOM05D000112 ORTHO05D010432 6.7e-11 71.2 118 37.3
BraA09t38112Z Brassica rapa HOM05D000112 ORTHO05D010432 6.7e-11 71.2 113 40.7
BcaB06g27596 Brassica carinata HOM05D000112 ORTHO05D010432 2.0e-10 69.7 119 40.3
BcaC04g23943 Brassica carinata HOM05D000112 ORTHO05D010432 2.0e-10 69.7 81 43.2
BraA09t38108Z Brassica rapa HOM05D000112 ORTHO05D010432 2.0e-10 69.7 102 42.2
BcaC06g34563 Brassica carinata HOM05D000112 ORTHO05D010432 2.6e-10 69.3 79 46.8
C07p27100 Brassica napus HOM05D000112 ORTHO05D010432 2.6e-10 69.3 79 46.8
AT1G34410 Arabidopsis thaliana HOM05D000112 ORTHO05D000564 3.3e-10 68.9 124 41.1
C09p03050 Brassica napus HOM05D000112 ORTHO05D010432 4.4e-10 68.6 83 42.2
BolC9t53235H Brassica oleracea HOM05D000112 ORTHO05D010432 4.4e-10 68.6 83 42.2
BcaC04g21395 Brassica carinata HOM05D000112 ORTHO05D010432 5.7e-10 68.2 82 42.7
A09p25320 Brassica napus HOM05D000112 ORTHO05D010432 5.7e-10 68.2 110 41.8
BraA09t38109Z Brassica rapa HOM05D000112 ORTHO05D010432 5.7e-10 68.2 105 40.0
AT1G35520 Arabidopsis thaliana HOM05D000112 ORTHO05D000564 9.7e-10 67.4 124 40.3
A06p47260 Brassica napus HOM05D000112 ORTHO05D010432 9.7e-10 67.4 89 46.1
BolC9t56077H Brassica oleracea HOM05D000112 ORTHO05D010432 9.7e-10 67.4 76 43.4
A09p25270 Brassica napus HOM05D000112 ORTHO05D010432 2.8e-09 65.9 76 43.4
BolC7t43239H Brassica oleracea HOM05D000112 ORTHO05D010432 2.8e-09 65.9 89 44.9
BcaC01g01782 Brassica carinata HOM05D000112 ORTHO05D032741 6.3e-09 64.7 71 47.9
C03p71920 Brassica napus HOM05D000112 ORTHO05D032741 6.3e-09 64.7 71 47.9
C04p14280 Brassica napus HOM05D000112 ORTHO05D010432 6.3e-09 64.7 84 45.2
BolC4t23014H Brassica oleracea HOM05D000112 ORTHO05D010432 6.3e-09 64.7 84 45.2
C09p32280 Brassica napus HOM05D000112 ORTHO05D017602 8.2e-09 64.3 83 39.8
A09p25240 Brassica napus HOM05D000112 ORTHO05D010432 1.4e-08 63.5 76 42.1
AT1G34310 Arabidopsis thaliana HOM05D000112 ORTHO05D000564 1.8e-08 63.2 124 40.3
AT1G35240 Arabidopsis thaliana HOM05D000112 ORTHO05D000564 1.8e-08 63.2 120 40.0
BcaB04g18060 Brassica carinata HOM05D000112 ORTHO05D010432 1.8e-08 63.2 87 46.0
BolC9t56075H Brassica oleracea HOM05D000112 ORTHO05D017602 1.8e-08 63.2 81 39.5
BcaB01g01926 Brassica carinata HOM05D000112 ORTHO05D010432 4.1e-08 62.0 72 43.1
BcaB01g01925 Brassica carinata HOM05D000112 ORTHO05D010432 7.7e-07 57.8 72 43.1
C09p33860 Brassica napus HOM05D000112 ORTHO05D027428 7.7e-07 57.8 123 34.1
BolC9t56224H Brassica oleracea HOM05D000112 ORTHO05D027428 7.7e-07 57.8 123 34.1
BcaB01g01710 Brassica carinata HOM05D000112 ORTHO05D010432 2.9e-06 55.8 78 37.2
BcaC04g21248 Brassica carinata HOM05D000112 ORTHO05D027428 8.5e-06 54.3 119 33.6


User provided reference genes

Program Settings