Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 2.0e-169 599.0 292 100.0
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 2.4e-162 575.5 292 95.2
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 1.5e-161 572.8 290 94.8
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 3.4e-161 571.6 292 94.2
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 6.4e-160 567.4 292 93.8
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 1.1e-159 566.6 292 94.2
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 2.4e-159 565.5 290 93.4
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 2.4e-159 565.5 292 93.8
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 2.4e-159 565.5 290 93.4
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 5.4e-159 564.3 292 93.8
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 5.4e-159 564.3 292 93.5
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 1.0e-157 560.1 292 92.8
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 2.3e-157 558.9 290 92.1
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 2.3e-157 558.9 290 92.1
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 8.7e-157 557.0 291 91.4
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 8.7e-157 557.0 290 91.7
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 8.7e-157 557.0 290 91.7
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 7.3e-156 553.9 292 90.1
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.3e-149 532.3 292 87.0
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 3.1e-146 521.9 292 83.6
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 5.3e-146 521.2 292 83.2
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 1.2e-145 520.0 294 85.0
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 9.9e-145 516.9 292 83.9
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 9.9e-145 516.9 292 83.6
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 6.4e-144 514.2 292 81.8
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 6.4e-144 514.2 290 82.1
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 6.4e-144 514.2 292 82.5
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 8.4e-144 513.8 292 82.2
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 1.4e-143 513.1 290 82.1
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 1.4e-143 513.1 292 82.5
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 1.9e-143 512.7 292 82.5
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 3.2e-143 511.9 292 82.5
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 3.2e-143 511.9 292 82.2
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 5.5e-143 511.1 292 81.5
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 5.5e-143 511.1 291 82.1
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 9.3e-143 510.4 292 82.2
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 1.2e-142 510.0 289 82.4
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 1.6e-142 509.6 292 81.8
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 2.1e-142 509.2 288 81.6
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 2.1e-142 509.2 292 81.5
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 2.1e-142 509.2 292 81.5
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 2.1e-142 509.2 292 80.8
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 2.7e-142 508.8 292 81.2
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 2.7e-142 508.8 292 81.5
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 3.5e-142 508.4 292 81.5
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 4.6e-142 508.1 292 81.2
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 6.0e-142 507.7 292 81.8
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 6.0e-142 507.7 290 81.7
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 1.0e-141 506.9 294 81.6
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 1.3e-141 506.5 287 82.2
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 1.3e-141 506.5 287 82.2
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 1.3e-141 506.5 292 81.5
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.3e-141 506.5 292 81.5
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 1.3e-141 506.5 288 81.6
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 1.8e-141 506.1 288 81.2
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 2.3e-141 505.8 292 81.2
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 3.0e-141 505.4 292 81.2
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 3.0e-141 505.4 292 81.5
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 5.1e-141 504.6 292 80.5
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 6.7e-141 504.2 292 80.8
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 6.7e-141 504.2 287 81.5
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 8.7e-141 503.8 290 81.7
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 1.1e-140 503.4 290 81.4
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 1.5e-140 503.1 292 80.5
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 1.5e-140 503.1 292 81.2
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 2.5e-140 502.3 289 80.6
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 4.3e-140 501.5 290 81.4
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 4.3e-140 501.5 288 80.6
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 7.4e-140 500.7 288 80.2
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 7.4e-140 500.7 292 81.2
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.6e-139 499.6 292 81.2
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 2.1e-139 499.2 292 80.5
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 6.2e-139 497.7 280 81.8
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 2.4e-138 495.7 321 73.5
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 2.4e-138 495.7 292 80.5
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 5.3e-138 494.6 292 80.1
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 5.3e-138 494.6 287 79.8
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 5.3e-138 494.6 288 79.5
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 5.3e-138 494.6 292 80.8
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 6.9e-138 494.2 290 80.0
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 1.2e-137 493.4 292 78.8
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 2.6e-137 492.3 292 80.5
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 1.3e-136 490.0 289 79.2
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 1.7e-136 489.6 291 79.7
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 2.2e-136 489.2 289 79.9
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 6.5e-136 487.6 291 76.6
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 6.5e-136 487.6 287 79.1
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 8.4e-136 487.3 292 79.5
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 1.4e-135 486.5 290 76.9
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 3.2e-135 485.3 290 77.6
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 2.1e-134 482.6 292 79.1
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 7.9e-134 480.7 290 77.2
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 1.8e-133 479.6 289 77.2
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 3.0e-133 478.8 273 82.4
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 5.1e-133 478.0 292 78.4
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 3.3e-132 475.3 291 74.9
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 6.3e-131 471.1 273 80.6
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 8.2e-131 470.7 289 76.8
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 1.8e-130 469.5 290 77.6
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 4.1e-130 468.4 291 73.9
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 6.9e-130 467.6 289 75.4
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 2.0e-129 466.1 271 80.4
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 4.5e-129 464.9 270 80.7
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 3.2e-127 458.8 313 72.8
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 4.2e-127 458.4 292 75.3
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 7.2e-127 457.6 251 83.7
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 2.1e-126 456.1 292 75.3
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 1.0e-125 453.8 271 77.5
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 3.8e-120 435.3 292 72.3
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 1.1e-119 433.7 283 69.6
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 1.9e-119 433.0 310 66.5
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.5e-116 423.3 281 68.0
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 2.6e-116 422.5 271 74.5
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 3.7e-115 418.7 286 66.8
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.7e-112 409.8 266 69.9
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 6.7e-109 397.9 273 66.7
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 2.8e-107 392.5 281 64.4
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 2.2e-99 366.3 223 76.7
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 5.9e-89 331.6 306 57.2
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.2e-83 313.2 194 75.8
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 2.8e-83 312.8 285 50.5
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 1.2e-81 307.4 190 75.3
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 1.7e-80 303.5 183 78.7
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 8.6e-80 301.2 173 82.7
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 4.3e-79 298.9 294 52.0
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 1.2e-76 290.8 290 52.1
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 3.2e-74 282.7 188 69.1
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 1.0e-69 267.7 293 46.1
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 1.6e-57 227.3 312 42.9
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 7.3e-55 218.4 164 65.2
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.6e-52 209.9 224 50.4
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.1e-50 204.5 221 50.2
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 4.0e-45 186.0 114 75.4
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 8.4e-43 178.3 101 81.2
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.4e-42 177.6 102 79.4
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.0e-40 169.9 97 80.4
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 4.0e-29 132.9 77 79.2
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 6.2e-22 109.0 97 58.8
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 3.1e-21 106.7 164 37.8
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 2.9e-11 73.6 51 68.6
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 1.0e-08 65.1 40 80.0


User provided reference genes

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