Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g02160 Schrenkiella parvula HOM05D013772 ORTHO05D006334 1.5e-37 159.1 83 100.0
BcaC07g41006 Brassica carinata HOM05D013772 ORTHO05D006334 1.1e-24 116.3 86 80.2
C08p40100 Brassica napus HOM05D013772 ORTHO05D006334 1.1e-24 116.3 86 80.2
BolC8t51580H Brassica oleracea HOM05D013772 ORTHO05D006334 1.1e-24 116.3 86 80.2
A09p57080 Brassica napus HOM05D013772 ORTHO05D006334 3.2e-24 114.8 86 79.1
BraA09t41100Z Brassica rapa HOM05D013772 ORTHO05D006334 3.2e-24 114.8 86 79.1
Thhalv10000405m.g Eutrema salsugineum HOM05D013772 ORTHO05D006334 7.2e-24 113.6 84 77.4
CARHR114390 Cardamine hirsuta HOM05D013772 ORTHO05D006334 9.1e-19 96.7 82 69.5
Carub.0004s0233 Capsella rubella HOM05D013772 ORTHO05D006334 1.2e-15 86.3 83 65.1
AL4G12960 Arabidopsis lyrata HOM05D013772 ORTHO05D006334 1.6e-15 85.9 88 64.8
AT2G23120 Arabidopsis thaliana HOM05D013772 ORTHO05D006334 1.8e-14 82.4 88 61.4
CARHR114400 Cardamine hirsuta HOM05D005680 ORTHO05D006334 6.3e-12 73.9 74 58.1
AT2G23110 Arabidopsis thaliana HOM05D005680 ORTHO05D006334 8.3e-12 73.6 74 59.5
Aa31LG7G13780 Aethionema arabicum HOM05D005680 ORTHO05D006334 7.0e-11 70.5 73 58.9
Carub.0004s0232 Capsella rubella HOM05D005680 ORTHO05D006334 7.0e-11 70.5 74 58.1
Thhalv10000392m.g Eutrema salsugineum HOM05D005680 ORTHO05D006334 4.5e-10 67.8 74 56.8
Sp4g02150 Schrenkiella parvula HOM05D005680 ORTHO05D006334 1.0e-09 66.6 75 58.7
AUR62003966 Chenopodium quinoa HOM05D005680 ORTHO05D006334 3.8e-09 64.7 74 52.7
THA.LOC104819870 Tarenaya hassleriana HOM05D005680 ORTHO05D006334 6.5e-09 63.9 54 64.8
AUR62038279 Chenopodium quinoa HOM05D005680 ORTHO05D006334 5.5e-08 60.8 74 50.0
arahy.Tifrunner.gnm1.ann1.Y5V9TA Arachis hypogaea HOM05D005680 ORTHO05D006334 9.4e-08 60.1 53 62.3
THA.LOC104806914 Tarenaya hassleriana HOM05D005680 ORTHO05D006334 9.4e-08 60.1 60 53.3
TAR625G0576 Trochodendron aralioides HOM05D005680 ORTHO05D006334 9.4e-08 60.1 61 54.1
TAR628G1700 Trochodendron aralioides HOM05D005680 ORTHO05D006334 2.1e-07 58.9 61 59.0
Aqoxy7G01353 Aquilegia oxysepala HOM05D005680 ORTHO05D006334 2.7e-07 58.5 53 62.3
BcaC01g05829 Brassica carinata HOM05D005680 ORTHO05D006334 3.6e-07 58.2 61 54.1
C03p22000 Brassica napus HOM05D005680 ORTHO05D006334 3.6e-07 58.2 61 54.1
PSO063G6705 Papaver somniferum HOM05D005680 ORTHO05D006334 4.7e-07 57.8 66 53.0
Sp4g16030 Schrenkiella parvula HOM05D005680 ORTHO05D006334 6.1e-07 57.4 61 52.5
arahy.Tifrunner.gnm1.ann1.C6RKPL Arachis hypogaea HOM05D005680 ORTHO05D006334 8.0e-07 57.0 49 63.3
BcaB06g28712 Brassica carinata HOM05D005680 ORTHO05D006334 8.0e-07 57.0 59 54.2
A04p25910 Brassica napus HOM05D005680 ORTHO05D006334 8.0e-07 57.0 50 58.0
BraA04t18094Z Brassica rapa HOM05D005680 ORTHO05D006334 8.0e-07 57.0 50 58.0
Atru.chr3.206 Acer truncatum HOM05D005680 ORTHO05D006334 1.0e-06 56.6 74 47.3
BcaC02g07811 Brassica carinata HOM05D005680 ORTHO05D006334 1.0e-06 56.6 59 52.5
C04p63190 Brassica napus HOM05D005680 ORTHO05D006334 1.0e-06 56.6 59 52.5
Thhalv10017732m.g Eutrema salsugineum HOM05D005680 ORTHO05D006334 1.0e-06 56.6 61 50.8
TAR376G0914 Trochodendron aralioides HOM05D005680 ORTHO05D006334 1.4e-06 56.2 61 57.4
Aa31LG9G13590 Aethionema arabicum HOM05D005680 ORTHO05D006334 1.8e-06 55.8 52 51.9
AT2G33690 Arabidopsis thaliana HOM05D005680 ORTHO05D006334 2.3e-06 55.5 57 56.1
BcaB01g03924 Brassica carinata HOM05D005680 ORTHO05D006334 2.3e-06 55.5 61 50.8
PGR102G2721 Punica granatum HOM05D005680 ORTHO05D006334 2.3e-06 55.5 51 66.7
Sabra02G0004200 Salix brachista HOM05D005680 ORTHO05D006334 2.3e-06 55.5 56 57.1
Sc19g0003710 Simmondsia chinensis HOM05D005680 ORTHO05D006334 3.0e-06 55.1 58 50.0
Potri.002G006000 Populus trichocarpa HOM05D005680 ORTHO05D006334 4.0e-06 54.7 56 57.1
RcHm_v2.0_Chr2g0107321 Rosa chinensis HOM05D005680 ORTHO05D006334 8.8e-06 53.5 69 49.3
Sabra05G0114900 Salix brachista HOM05D005680 ORTHO05D006334 8.8e-06 53.5 67 55.2


User provided reference genes

Program Settings