Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g00690 Schrenkiella parvula HOM05D007263 ORTHO05D009187 7.7e-118 427.2 217 100.0
Carub.0004s0057 Capsella rubella HOM05D007263 ORTHO05D009187 1.5e-97 359.8 212 91.0
Thhalv10000320m.g Eutrema salsugineum HOM05D007263 ORTHO05D009187 5.7e-97 357.8 213 86.9
A09p58160 Brassica napus HOM05D007263 ORTHO05D009187 4.1e-95 351.7 216 87.0
BraA09t41205Z Brassica rapa HOM05D007263 ORTHO05D009187 4.1e-95 351.7 216 87.0
BcaC07g41154 Brassica carinata HOM05D007263 ORTHO05D009187 2.0e-94 349.4 217 87.1
BolC8t51703H Brassica oleracea HOM05D007263 ORTHO05D009187 2.0e-94 349.4 217 87.1
AT2G21530 Arabidopsis thaliana HOM05D007263 ORTHO05D009187 1.5e-92 343.2 213 87.3
CARHR112460 Cardamine hirsuta HOM05D007263 ORTHO05D009187 2.8e-91 339.0 207 86.5
AL4G10720 Arabidopsis lyrata HOM05D007263 ORTHO05D009187 4.0e-90 335.1 213 85.9
Aa31LG7G14990 Aethionema arabicum HOM05D007263 ORTHO05D009187 1.3e-61 240.4 214 65.4
THA.LOC104816966 Tarenaya hassleriana HOM05D007263 ORTHO05D009187 1.2e-46 190.7 213 51.6
PGR119G0910 Punica granatum HOM05D007263 ORTHO05D009187 6.7e-45 184.9 146 64.4
Phvul.L004437 Phaseolus vulgaris HOM05D007263 ORTHO05D009187 4.8e-43 178.7 156 57.7
VMungo0540G1942 Vigna mungo HOM05D007263 ORTHO05D009187 4.8e-43 178.7 157 56.7
Eucgr.J00617 Eucalyptus grandis HOM05D007263 ORTHO05D009187 1.4e-42 177.2 226 48.7
Glyma.20G058100 Glycine max HOM05D007263 ORTHO05D009187 1.4e-42 177.2 158 58.9
Manes.09G111800 Manihot esculenta HOM05D007263 ORTHO05D009187 3.1e-42 176.0 133 66.9
TWI79G1263 Tripterygium wilfordii HOM05D007263 ORTHO05D009187 3.1e-42 176.0 220 47.7
FvH4_3g27180 Fragaria vesca HOM05D007263 ORTHO05D009187 5.3e-42 175.3 150 60.7
FAN16G1710 Fragaria x ananassa HOM05D007263 ORTHO05D009187 1.2e-41 174.1 150 60.0
GSVIVG01037444001 Vitis vinifera HOM05D000101 ORTHO05D000089 1.5e-41 173.7 203 49.8
MSTRG.17655 Avicennia marina HOM05D007263 ORTHO05D009187 2.0e-41 173.3 136 61.8
Rhsim01G0197200 Rhododendron simsii HOM05D007263 ORTHO05D009187 5.8e-41 171.8 116 71.6
CANSAT54G3001 Cannabis sativa HOM05D007263 ORTHO05D009187 7.6e-41 171.4 150 58.0
Dinv32124 Davidia involucrata HOM05D007263 ORTHO05D009187 7.6e-41 171.4 146 60.3
CiPaw.13G127300 Carya illinoinensis HOM05D007263 ORTHO05D009187 9.9e-41 171.0 133 65.4
Ciclev10016536m.g Citrus clementina HOM05D007263 ORTHO05D009187 1.7e-40 170.2 164 54.3
Nn6g32384 Nelumbo nucifera HOM05D007263 ORTHO05D009187 1.7e-40 170.2 136 63.2
Lj6g0015831 Lotus japonicus HOM05D007263 ORTHO05D009187 2.9e-40 169.5 140 60.0
SGA_v2.0_scaffold16G07576 Striga asiatica HOM05D007263 ORTHO05D009187 2.9e-40 169.5 137 61.3
SGA_v2.0_scaffold3G01630 Striga asiatica HOM05D007263 ORTHO05D009187 2.9e-40 169.5 137 61.3
Gohir.D05G078200 Gossypium hirsutum HOM05D007263 ORTHO05D009187 3.8e-40 169.1 133 61.7
Gorai.009G079700 Gossypium raimondii HOM05D007263 ORTHO05D009187 3.8e-40 169.1 133 61.7
DCAR_028386 Daucus carota HOM05D007263 ORTHO05D009187 4.9e-40 168.7 159 58.5
FAN11G0122 Fragaria x ananassa HOM05D007263 ORTHO05D009187 4.9e-40 168.7 156 58.3
Gohir.A05G075400 Gossypium hirsutum HOM05D007263 ORTHO05D009187 4.9e-40 168.7 144 59.0
MBI19_g09308_MAGBIO Magnolia biondii HOM05D007263 ORTHO05D009187 6.4e-40 168.3 145 55.2
Atru.chr3.2913 Acer truncatum HOM05D007263 ORTHO05D009187 1.1e-39 167.5 154 57.1
Cfa010246 Carpinus fangiana HOM05D007263 ORTHO05D009187 1.4e-39 167.2 136 61.8
HanXRQChr03g0085111 Helianthus annuus HOM05D007263 ORTHO05D009187 1.4e-39 167.2 159 57.2
TAR623G1137 Trochodendron aralioides HOM05D007263 ORTHO05D009187 1.4e-39 167.2 133 63.9
MD11G1181300 Malus domestica HOM05D007263 ORTHO05D009187 1.9e-39 166.8 159 54.7
RcHm_v2.0_Chr5g0049851 Rosa chinensis HOM05D007263 ORTHO05D009187 1.9e-39 166.8 125 64.8
CDE07G0519 Ceratophyllum demersum HOM05D007263 ORTHO05D009187 2.4e-39 166.4 198 48.5
Actinidia06355 Actinidia chinensis HOM05D007263 ORTHO05D009187 3.2e-39 166.0 218 47.7
SGA_v2.0_scaffold29G12128 Striga asiatica HOM05D000563 ORTHO05D000536 4.2e-39 165.6 124 63.7
Medtr3g079520 Medicago truncatula HOM05D007263 ORTHO05D009187 5.5e-39 165.2 119 65.5
Medtr3g479600 Medicago truncatula HOM05D007263 ORTHO05D009187 5.5e-39 165.2 119 65.5
Hma1.2p1_0994F.1_g245580 Hydrangea macrophylla HOM05D007263 ORTHO05D009187 7.1e-39 164.9 131 64.9
Thecc.09G263800 Theobroma cacao HOM05D007263 ORTHO05D009187 7.1e-39 164.9 132 63.6
Lsat_1_v5_gn_6_85860 Lactuca sativa HOM05D007263 ORTHO05D009187 9.3e-39 164.5 123 62.6
ATR0068G111 Amborella trichopoda HOM05D007263 ORTHO05D009187 1.2e-38 164.1 163 50.3
Ca_16255_v3 Cicer arietinum L. HOM05D007263 ORTHO05D009187 1.2e-38 164.1 207 48.3
COL.COLO4_25292 Corchorus olitorius HOM05D007263 ORTHO05D009187 1.2e-38 164.1 135 63.7
Prupe.6G154100 Prunus persica HOM05D007263 ORTHO05D009187 1.2e-38 164.1 214 47.7
Duzib168G0238 Durio zibethinus HOM05D007263 ORTHO05D009187 1.6e-38 163.7 210 49.5
PSO339G3146 Papaver somniferum HOM05D007263 ORTHO05D009187 1.6e-38 163.7 154 55.8
PSO384G0367 Papaver somniferum HOM05D007263 ORTHO05D009187 1.6e-38 163.7 154 55.8
ECA240G3643 Erigeron canadensis HOM05D000684 ORTHO05D000688 2.1e-38 163.3 127 62.2
Sabra09G0122700 Salix brachista HOM05D007263 ORTHO05D009187 6.0e-38 161.8 133 60.9
FAN25G1860 Fragaria x ananassa HOM05D007263 ORTHO05D009187 3.9e-37 159.1 188 48.4
Sed0004996 Sechium edule HOM05D007263 ORTHO05D009187 5.1e-37 158.7 120 65.0
vmacro23061 Vaccinium macrocarpon HOM05D007263 ORTHO05D009187 6.7e-37 158.3 118 67.8
SalBow3G2238 Salvia bowleyana HOM05D007263 ORTHO05D009187 8.7e-37 157.9 140 56.4
Oeu032066.1 Olea europaea HOM05D007263 ORTHO05D009187 3.3e-36 156.0 217 45.2
CSS0014161 Camellia sinensis var. sinensis HOM05D007263 ORTHO05D009187 1.6e-35 153.7 200 49.5
ClCG02G024290 Citrullus lanatus HOM05D007263 ORTHO05D009187 2.8e-35 152.9 134 58.2
Cc01_g07450 Coffea canephora HOM05D007263 ORTHO05D009187 2.8e-35 152.9 120 59.2
Lalb_Chr14g0363361 Lupinus albus HOM05D007263 ORTHO05D009187 1.1e-34 151.0 124 62.1
unitig_8.g2984 Utricularia gibba HOM05D007263 ORTHO05D009187 3.1e-34 149.4 112 65.2
EL10Ac7g16235 Beta vulgaris HOM05D007263 ORTHO05D009187 6.9e-34 148.3 135 57.8
Psat5g112360 Pisum sativum HOM05D007263 ORTHO05D009187 6.9e-34 148.3 121 61.2
Sopen01g004570 Solanum pennellii HOM05D007263 ORTHO05D009187 6.9e-34 148.3 217 42.4
QL01p020523 Quercus lobata HOM05D007263 ORTHO05D009187 9.0e-34 147.9 118 61.9
Solyc01g009080.4 Solanum lycopersicum HOM05D007263 ORTHO05D009187 1.2e-33 147.5 217 43.8
CAN.G651.2 Capsicum annuum HOM05D007263 ORTHO05D009187 1.5e-33 147.1 143 54.5
PGSC0003DMG400022700 Solanum tuberosum HOM05D007263 ORTHO05D009187 1.5e-33 147.1 217 44.2
Sc06g0006180 Simmondsia chinensis HOM05D007263 ORTHO05D009187 2.0e-33 146.7 123 56.1
Potri.009G156700 Populus trichocarpa HOM05D007263 ORTHO05D009187 4.5e-33 145.6 201 43.8
AUR62001600 Chenopodium quinoa HOM05D007263 ORTHO05D009187 1.0e-32 144.4 139 53.2
Os11g0127800 Oryza sativa ssp. japonica HOM05D007263 ORTHO05D009187 1.3e-32 144.1 150 48.0
Hund18825 Selenicereus undatus HOM05D007263 ORTHO05D009187 1.7e-32 143.7 111 59.5
CSS0024406 Camellia sinensis var. sinensis HOM05D007263 ORTHO05D009187 2.9e-32 142.9 105 65.7
AUR62020179 Chenopodium quinoa HOM05D007263 ORTHO05D009187 2.9e-32 142.9 176 46.6
SMO271G0152 Selaginella moellendorffii HOM05D007263 ORTHO05D009187 4.9e-32 142.1 146 45.2
Pp3c1_27160 Physcomitrium patens HOM05D007263 ORTHO05D009187 5.5e-31 138.7 147 46.3
Pp3c2_15500 Physcomitrium patens HOM05D007263 ORTHO05D009187 9.3e-31 137.9 114 54.4
Zm00001eb163720 Zea mays HOM05D007263 ORTHO05D009187 1.2e-30 137.5 128 53.1
MELO3C014714.2 Cucumis melo HOM05D007263 ORTHO05D009187 3.5e-30 136.0 99 67.7
TPR.G9589 Trifolium pratense HOM05D007263 ORTHO05D009187 1.0e-29 134.4 103 62.1
Migut.N02412 Erythranthe guttata HOM05D007263 ORTHO05D009187 1.3e-29 134.0 100 62.0
Haze_23636 Corylus avellana HOM05D007263 ORTHO05D009187 4.1e-26 122.5 188 41.0
Mapoly0061s0077 Marchantia polymorpha HOM05D007263 ORTHO05D009187 9.0e-26 121.3 139 43.2
Potri.009G156900 Populus trichocarpa HOM05D007263 ORTHO05D009187 2.2e-24 116.7 124 50.8
CsaV3_4G017420 Cucumis sativus L. HOM05D007263 ORTHO05D009187 2.9e-24 116.3 131 51.1
Peaxi162Scf00342g00119 Petunia axillaris HOM05D007263 ORTHO05D009187 1.1e-23 114.4 97 58.8
SGA_v2.0_scaffold8G04511 Striga asiatica HOM05D000563 ORTHO05D000536 1.1e-23 114.4 138 47.1
Nitab4.5_0000428g0130 Nicotiana tabacum HOM05D007263 ORTHO05D009187 1.2e-22 110.9 89 61.8
arahy.Tifrunner.gnm1.ann1.S2FUN4 Arachis hypogaea HOM05D007263 ORTHO05D009187 1.5e-20 104.0 126 46.0
arahy.Tifrunner.gnm1.ann1.TU72Q6 Arachis hypogaea HOM05D007263 ORTHO05D009187 1.5e-20 104.0 114 50.0
Cpa.g.sc103.87 Carica papaya HOM05D007263 ORTHO05D009187 1.9e-20 103.6 213 33.8
Nitab4.5_0002300g0100 Nicotiana tabacum HOM05D007263 ORTHO05D009187 2.2e-19 100.1 195 36.9
Os12g0124000 Oryza sativa ssp. japonica HOM05D007263 ORTHO05D009187 1.1e-18 97.8 132 39.4
MCO16G316 Micromonas commoda HOM05D007263 ORTHO05D009187 1.5e-17 94.0 134 38.1
Cpa.g.c47634 Carica papaya HOM05D007263 ORTHO05D009187 1.0e-16 91.3 114 44.7
SEGI_12571 Sequoiadendron giganteum HOM05D007263 ORTHO05D009187 1.0e-16 91.3 73 60.3
Cre12.g534450 Chlamydomonas reinhardtii HOM05D007263 ORTHO05D009187 9.4e-15 84.7 136 39.0
PRCOL_00003243 Prasinoderma coloniale HOM05D007263 ORTHO05D009187 2.0e-12 77.0 108 37.0
Sabra04G0132300 Salix brachista HOM05D000052 ORTHO05D001127 7.7e-09 65.1 56 57.1
Nitab4.5_0002016g0120 Nicotiana tabacum HOM05D002878 ORTHO05D003649 2.1e-06 57.0 117 33.3
Solyc02g090890.4 Solanum lycopersicum HOM05D002878 ORTHO05D003649 7.9e-06 55.1 146 28.8


User provided reference genes

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