Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 5.3e-123 444.5 245 100.0
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 1.2e-71 273.9 244 66.8
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 1.2e-71 273.9 244 66.8
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 2.1e-71 273.1 242 69.0
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 5.7e-69 265.0 242 64.0
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 8.2e-68 261.2 245 64.9
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 2.4e-67 259.6 245 63.7
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 2.4e-67 259.6 238 66.4
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 2.4e-67 259.6 238 66.4
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 4.5e-66 255.4 241 63.1
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 8.0e-63 244.6 243 61.7
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 3.5e-50 202.6 254 49.6
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.3e-49 200.7 256 53.9
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 7.3e-48 194.9 258 50.0
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 6.1e-47 191.8 247 54.3
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 2.3e-46 189.9 247 53.8
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 4.0e-46 189.1 250 52.0
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 1.5e-45 187.2 250 51.6
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 7.5e-45 184.9 256 51.6
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 2.9e-44 183.0 267 46.4
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 1.8e-43 180.3 250 51.2
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 5.4e-43 178.7 244 51.2
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 5.4e-43 178.7 244 51.2
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 7.8e-42 174.9 264 49.6
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 5.0e-33 145.6 124 60.5
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 5.0e-33 145.6 124 60.5
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 5.0e-33 145.6 124 60.5
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 8.6e-33 144.8 237 43.9
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 2.5e-32 143.3 100 73.0
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 4.3e-32 142.5 137 55.5
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 7.3e-32 141.7 94 74.5
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 1.6e-31 140.6 132 58.3
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 2.1e-31 140.2 109 65.1
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 3.6e-31 139.4 137 55.5
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 4.7e-31 139.0 105 66.7
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 4.7e-31 139.0 238 43.7
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 6.2e-31 138.7 98 71.4
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 6.2e-31 138.7 250 39.2
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 1.1e-30 137.9 98 70.4
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 1.1e-30 137.9 98 70.4
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 1.1e-30 137.9 154 51.3
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 3.1e-30 136.3 101 66.3
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 3.1e-30 136.3 98 69.4
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 4.0e-30 136.0 98 68.4
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 4.0e-30 136.0 93 71.0
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 5.2e-30 135.6 194 48.5
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 8.9e-30 134.8 94 71.3
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 8.9e-30 134.8 245 40.8
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 1.2e-29 134.4 110 63.6
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 1.5e-29 134.0 268 41.4
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 1.5e-29 134.0 247 42.1
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 2.0e-29 133.7 115 61.7
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 2.0e-29 133.7 98 70.4
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 2.0e-29 133.7 93 69.9
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 2.6e-29 133.3 99 71.7
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 2.6e-29 133.3 98 68.4
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 4.4e-29 132.5 254 42.9
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 5.8e-29 132.1 98 68.4
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 5.8e-29 132.1 98 69.4
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 5.8e-29 132.1 246 41.9
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 7.5e-29 131.7 189 43.9
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 9.9e-29 131.3 245 39.6
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 9.9e-29 131.3 139 55.4
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 9.9e-29 131.3 96 68.8
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 1.3e-28 131.0 98 67.3
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 1.3e-28 131.0 98 65.3
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 1.7e-28 130.6 112 62.5
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 1.7e-28 130.6 245 40.0
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 4.9e-28 129.0 99 63.6
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 4.9e-28 129.0 112 61.6
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 4.9e-28 129.0 98 64.3
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 6.4e-28 128.6 100 65.0
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 6.4e-28 128.6 98 67.3
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 1.1e-27 127.9 237 40.5
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 1.1e-27 127.9 126 53.2
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 1.4e-27 127.5 106 60.4
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 1.9e-27 127.1 109 60.6
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 1.9e-27 127.1 200 46.5
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 4.1e-27 125.9 105 64.8
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 4.1e-27 125.9 125 56.0
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 5.4e-27 125.6 104 63.5
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 7.1e-27 125.2 245 40.8
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 1.2e-26 124.4 98 65.3
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.6e-26 124.0 95 66.3
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 1.6e-26 124.0 98 66.3
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 4.6e-26 122.5 245 38.4
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 6.0e-26 122.1 98 64.3
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 6.0e-26 122.1 94 66.0
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 7.8e-26 121.7 98 64.3
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 1.3e-25 120.9 93 64.5
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 1.3e-25 120.9 127 52.8
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.7e-25 120.6 95 65.3
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 1.7e-25 120.6 142 49.3
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 6.6e-25 118.6 120 54.2
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 6.6e-25 118.6 93 63.4
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 6.6e-25 118.6 231 37.2
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 8.6e-25 118.2 219 37.9
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 8.6e-25 118.2 219 37.9
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 2.5e-24 116.7 193 39.4
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 2.5e-24 116.7 127 51.2
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 1.2e-23 114.4 252 39.7
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 2.1e-23 113.6 118 52.5
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 3.1e-22 109.8 123 52.8
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 2.1e-15 87.0 98 42.9
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 4.0e-14 82.8 55 70.9
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 1.3e-12 77.8 62 66.1
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 1.7e-12 77.4 98 45.9
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 2.9e-12 76.6 93 45.2
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 3.8e-12 76.3 92 44.6
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 9.3e-11 71.6 96 39.6
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 5.1e-09 65.9 50 62.0
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 5.1e-09 65.9 50 62.0
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 5.1e-09 65.9 51 60.8
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 5.1e-09 65.9 50 62.0
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.1e-08 64.7 46 65.2
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 1.5e-08 64.3 52 65.4
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 1.9e-08 63.9 50 66.0
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.5e-08 63.5 49 63.3
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 1.3e-07 61.2 52 65.4
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 2.1e-07 60.5 98 38.8
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 2.1e-07 60.5 50 64.0


User provided reference genes

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