Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g33480 Schrenkiella parvula HOM05D012015 ORTHO05D014750 0.0e+00 1184.9 582 100.0
Thhalv10001946m.g Eutrema salsugineum HOM05D012015 ORTHO05D014750 2.3e-233 812.4 582 75.4
AL3G47840 Arabidopsis lyrata HOM05D012015 ORTHO05D014750 4.3e-216 755.0 584 69.7
CARHR110740 Cardamine hirsuta HOM05D012015 ORTHO05D014750 5.3e-214 748.0 576 69.1
Carub.0003s3458 Capsella rubella HOM05D012015 ORTHO05D014750 1.6e-202 709.9 621 64.1
C09p15130 Brassica napus HOM05D012015 ORTHO05D014750 2.7e-194 682.6 571 69.4
BcaC04g22814 Brassica carinata HOM05D012015 ORTHO05D014750 5.7e-192 674.9 577 68.5
BraA09t36920Z Brassica rapa HOM05D012015 ORTHO05D014750 1.3e-188 663.7 568 68.1
A09p12760 Brassica napus HOM05D012015 ORTHO05D014750 1.8e-185 653.3 564 67.4
AT2G20250 Arabidopsis thaliana HOM05D012015 ORTHO05D014750 1.1e-184 650.6 522 69.0
BcaNung04097 Brassica carinata HOM05D012015 ORTHO05D014750 8.2e-183 644.4 568 67.8
Aa31LG8G17240 Aethionema arabicum HOM05D012015 ORTHO05D014750 1.1e-126 458.0 553 51.5
THA.LOC104814711 Tarenaya hassleriana HOM05D012015 ORTHO05D014750 2.9e-103 380.2 571 45.7
Cpa.g.sc8.212 Carica papaya HOM05D009210 ORTHO05D010367 4.6e-16 90.5 328 28.7
QL07p009176 Quercus lobata HOM05D009210 ORTHO05D010367 7.3e-14 83.2 497 27.2
QL09p043508 Quercus lobata HOM05D009210 ORTHO05D010367 7.3e-14 83.2 497 27.2
Ciclev10019870m.g Citrus clementina HOM05D009210 ORTHO05D010367 6.2e-13 80.1 347 26.2
QL09p043802 Quercus lobata HOM05D009210 ORTHO05D010367 1.1e-12 79.3 505 26.7
QL09p043653 Quercus lobata HOM05D009210 ORTHO05D010367 4.4e-11 73.9 507 26.6
Atru.chr5.1921 Acer truncatum HOM05D009210 ORTHO05D010367 1.3e-10 72.4 196 31.6
Gohir.A07G202550 Gossypium hirsutum HOM05D009210 ORTHO05D010367 1.3e-10 72.4 488 25.4
Duzib211G0683 Durio zibethinus HOM05D009210 ORTHO05D010367 2.9e-10 71.2 525 24.6
Lj5g0020428 Lotus japonicus HOM05D014010 ORTHO05D010367 4.9e-10 70.5 270 28.1
FvH4_2g19950 Fragaria vesca HOM05D016859 ORTHO05D010367 7.1e-09 66.6 245 28.6
Actinidia30107 Actinidia chinensis HOM05D009210 ORTHO05D010367 2.1e-08 65.1 185 31.9
Gorai.001G235700 Gossypium raimondii HOM05D009210 ORTHO05D010367 2.1e-08 65.1 471 24.2
Psat6g065120 Pisum sativum HOM05D014010 ORTHO05D010367 2.7e-08 64.7 293 31.4
Gohir.D07G208750 Gossypium hirsutum HOM05D009210 ORTHO05D010367 4.6e-08 63.9 219 29.2
FAN24G1655 Fragaria x ananassa HOM05D016859 ORTHO05D010367 6.0e-08 63.5 246 26.0
SGA_v2.0_scaffold3G01596 Striga asiatica HOM05D009210 ORTHO05D015998 1.1e-06 59.3 211 32.2
MSTRG.17532 Avicennia marina HOM05D013334 ORTHO05D015998 3.3e-06 57.8 539 22.4
BolC2t11511H Brassica oleracea HOM05D012015 ORTHO05D011383 4.3e-06 57.4 64 59.4
BcaC07g36866 Brassica carinata HOM05D012015 ORTHO05D011383 7.3e-06 56.6 64 59.4
Cfa002512 Carpinus fangiana HOM05D009210 ORTHO05D010367 7.3e-06 56.6 124 33.1
Medtr1g069195 Medicago truncatula HOM05D014010 ORTHO05D010367 7.3e-06 56.6 281 29.9
Ca_09627_v3 Cicer arietinum L. HOM05D014010 ORTHO05D010367 9.6e-06 56.2 219 30.6


User provided reference genes

Program Settings