Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g32660 Schrenkiella parvula HOM05D008657 ORTHO05D010869 6.1e-201 704.9 412 100.0
BcaB03g16718 Brassica carinata HOM05D008657 ORTHO05D010869 5.3e-160 568.9 413 70.2
C07p02910 Brassica napus HOM05D008657 ORTHO05D010869 3.3e-154 549.7 415 77.3
BcaC06g36560 Brassica carinata HOM05D008657 ORTHO05D010869 4.3e-154 549.3 415 77.1
BolC7t40688H Brassica oleracea HOM05D008657 ORTHO05D010869 7.4e-154 548.5 415 77.1
BraA07t27942Z Brassica rapa HOM05D008657 ORTHO05D010869 1.0e-150 538.1 417 77.5
A07p01450 Brassica napus HOM05D008657 ORTHO05D010869 2.3e-147 526.9 416 76.0
AT2G19280 Arabidopsis thaliana HOM05D008657 ORTHO05D010869 8.2e-145 518.5 411 78.6
CARHR109740 Cardamine hirsuta HOM05D008657 ORTHO05D010869 3.8e-134 483.0 414 75.8
AL3G49010 Arabidopsis lyrata HOM05D008657 ORTHO05D010869 1.2e-132 478.0 412 75.0
Carub.0003s3351 Capsella rubella HOM05D008657 ORTHO05D010869 1.1e-128 464.9 362 78.7
Thhalv10023028m.g Eutrema salsugineum HOM05D008657 ORTHO05D010869 8.5e-118 428.7 311 72.0
Aa31LG8G16330 Aethionema arabicum HOM05D008657 ORTHO05D010869 3.2e-117 426.8 413 70.0
Dinv02560 Davidia involucrata HOM05D008657 ORTHO05D010869 3.9e-62 243.8 428 43.2
CSS0003153 Camellia sinensis var. sinensis HOM05D000399 ORTHO05D000304 5.8e-58 229.9 419 41.5
Cpa.g.sc33.145 Carica papaya HOM05D008657 ORTHO05D010869 5.4e-56 223.4 323 54.5
COL.COLO4_28899 Corchorus olitorius HOM05D008657 ORTHO05D010869 7.8e-55 219.5 320 53.1
RcHm_v2.0_Chr1g0330001 Rosa chinensis HOM05D008657 ORTHO05D010869 1.9e-53 214.9 323 51.1
Actinidia03250 Actinidia chinensis HOM05D008657 ORTHO05D010869 1.6e-52 211.8 341 51.6
TAR376G1027 Trochodendron aralioides HOM05D008657 ORTHO05D010869 4.2e-48 197.2 424 43.9
Hund22231 Selenicereus undatus HOM05D008657 ORTHO05D010869 4.6e-47 193.7 334 49.7
Prupe.2G051600 Prunus persica HOM05D008657 ORTHO05D010869 1.3e-46 192.2 422 42.7
Lj3C333T3 Lonicera japonica HOM05D008657 ORTHO05D010869 1.7e-46 191.8 322 48.4
CsaV3_5G029290 Cucumis sativus L. HOM05D008657 ORTHO05D010869 2.8e-44 184.5 297 46.1
Sed0024339 Sechium edule HOM05D008657 ORTHO05D010869 1.1e-43 182.6 412 33.3
ClCG07G005030 Citrullus lanatus HOM05D008657 ORTHO05D010869 1.4e-43 182.2 325 41.5
Sc08g0000170 Simmondsia chinensis HOM05D008657 ORTHO05D010869 4.0e-43 180.6 334 37.4
CANSAT56G3352 Cannabis sativa HOM05D008657 ORTHO05D010869 3.4e-42 177.6 330 48.2
FAN10G0285 Fragaria x ananassa HOM05D008657 ORTHO05D010869 1.3e-38 165.6 361 43.8
MELO3C011779.2 Cucumis melo HOM05D008657 ORTHO05D010869 2.3e-38 164.9 297 41.1
Gorai.010G208900 Gossypium raimondii HOM05D008657 ORTHO05D010869 8.7e-38 162.9 332 44.3
Gohir.A06G171100 Gossypium hirsutum HOM05D008657 ORTHO05D010869 3.7e-36 157.5 332 43.7
Thecc.10G128900 Theobroma cacao HOM05D008657 ORTHO05D010869 4.5e-34 150.6 354 42.7
PGR031G0953 Punica granatum HOM05D008657 ORTHO05D010869 2.9e-33 147.9 298 46.6
FAN06G4111 Fragaria x ananassa HOM05D008657 ORTHO05D010869 2.5e-29 134.8 196 40.3
FvH4_7g04580 Fragaria vesca HOM05D008657 ORTHO05D010869 3.3e-29 134.4 196 40.3
FAN03G0499 Fragaria x ananassa HOM05D008657 ORTHO05D010869 7.9e-23 113.2 181 38.1
DCAR_018350 Daucus carota HOM05D008657 ORTHO05D010869 3.0e-22 111.3 325 36.9
Lj3A303T33 Lonicera japonica HOM05D008657 ORTHO05D010869 2.2e-20 105.1 227 32.6
FAN01G0963 Fragaria x ananassa HOM05D008657 ORTHO05D010869 6.3e-20 103.6 115 49.6
Oeu052822.1 Olea europaea HOM05D008657 ORTHO05D010869 1.8e-19 102.1 239 50.2
Eucgr.G03180 Eucalyptus grandis HOM05D008657 ORTHO05D010869 4.6e-15 87.4 112 40.2
ATR0618G019 Amborella trichopoda HOM05D006888 ORTHO05D008371 6.9e-11 73.6 216 27.3
SalBow4G0419 Salvia bowleyana HOM05D007455 ORTHO05D009431 2.9e-09 68.2 165 29.7
Gohir.D06G179000 Gossypium hirsutum HOM05D008657 ORTHO05D010869 6.5e-09 67.0 199 47.2
HPP92_000173 Vanilla planifolia HOM05D008657 ORTHO05D010869 3.2e-08 64.7 206 50.5
HPP92_001923 Vanilla planifolia HOM05D007455 ORTHO05D009431 4.2e-08 64.3 163 27.6
HPP92_001299 Vanilla planifolia HOM05D007291 ORTHO05D009038 7.2e-08 63.5 218 27.1
Oeu039576.1 Olea europaea HOM05D007455 ORTHO05D009431 9.4e-08 63.2 166 27.1
MSTRG.12443 Avicennia marina HOM05D007455 ORTHO05D009431 5.2e-06 57.4 204 24.5


User provided reference genes

Program Settings