Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g32480 Schrenkiella parvula HOM05D004681 ORTHO05D005541 1.7e-174 615.9 316 100.0
AL3G52840 Arabidopsis lyrata HOM05D004681 ORTHO05D005541 6.7e-155 550.8 314 89.2
BraA09t36865Z Brassica rapa HOM05D004681 ORTHO05D005541 1.5e-154 549.7 314 87.6
Thhalv10022785m.g Eutrema salsugineum HOM05D004681 ORTHO05D005541 2.0e-154 549.3 316 88.3
BcaB07g31622 Brassica carinata HOM05D004681 ORTHO05D005541 1.3e-153 546.6 314 87.3
A09p12190 Brassica napus HOM05D004681 ORTHO05D005541 2.8e-153 545.4 314 86.9
C09p14440 Brassica napus HOM05D004681 ORTHO05D005541 2.8e-153 545.4 314 87.3
Carub.0003s3332 Capsella rubella HOM05D004681 ORTHO05D005541 2.8e-153 545.4 314 88.5
BcaC04g22869 Brassica carinata HOM05D004681 ORTHO05D005541 1.8e-152 542.7 316 87.0
BolC9t54347H Brassica oleracea HOM05D004681 ORTHO05D005541 1.8e-152 542.7 315 87.6
BcaB03g16704 Brassica carinata HOM05D004681 ORTHO05D005541 4.1e-152 541.6 314 87.3
AT2G19080 Arabidopsis thaliana HOM05D004681 ORTHO05D005541 5.0e-150 534.6 314 87.9
BcaC06g36518 Brassica carinata HOM05D004681 ORTHO05D005541 2.6e-146 522.3 314 84.4
Aa31LG8G16140 Aethionema arabicum HOM05D004681 ORTHO05D005541 7.2e-141 504.2 314 81.2
CARHR109600 Cardamine hirsuta HOM05D004681 ORTHO05D005541 3.6e-140 501.9 314 81.8
C07p03410 Brassica napus HOM05D004681 ORTHO05D005541 2.0e-138 496.1 314 80.9
BolC7t40740H Brassica oleracea HOM05D004681 ORTHO05D005541 2.0e-138 496.1 314 80.9
A07p01650 Brassica napus HOM05D004681 ORTHO05D005541 1.8e-136 489.6 315 80.3
BraA07t27967Z Brassica rapa HOM05D004681 ORTHO05D005541 1.8e-136 489.6 315 80.3
THA.LOC104819968 Tarenaya hassleriana HOM05D004681 ORTHO05D005541 6.3e-129 464.5 315 74.3
Cpa.g.sc95.29 Carica papaya HOM05D004681 ORTHO05D005541 1.7e-118 429.9 311 69.5
Thecc.09G181200 Theobroma cacao HOM05D004681 ORTHO05D005541 2.9e-113 412.5 316 65.2
Gohir.D08G028500 Gossypium hirsutum HOM05D004681 ORTHO05D005541 1.7e-110 403.3 318 64.2
Gohir.A08G017900 Gossypium hirsutum HOM05D004681 ORTHO05D005541 1.1e-109 400.6 318 63.8
Duzib170G0205 Durio zibethinus HOM05D004681 ORTHO05D005541 5.6e-109 398.3 317 62.8
Gorai.004G025600 Gossypium raimondii HOM05D004681 ORTHO05D005541 2.8e-108 396.0 329 62.3
Atru.chr7.819 Acer truncatum HOM05D004681 ORTHO05D005541 8.0e-108 394.4 320 61.6
Duzib168G0714 Durio zibethinus HOM05D004681 ORTHO05D005541 5.2e-107 391.7 309 65.0
CiPaw.07G195100 Carya illinoinensis HOM05D004681 ORTHO05D005541 2.6e-106 389.4 320 62.5
Actinidia06358 Actinidia chinensis HOM05D004681 ORTHO05D005541 3.4e-106 389.0 311 62.1
GSVIVG01010902001 Vitis vinifera HOM05D004681 ORTHO05D005541 6.4e-105 384.8 314 61.8
Cfa013431 Carpinus fangiana HOM05D004681 ORTHO05D005541 1.1e-104 384.0 320 61.2
Ciclev10008916m.g Citrus clementina HOM05D004681 ORTHO05D005541 5.4e-104 381.7 319 62.7
TWI63G0533 Tripterygium wilfordii HOM05D004681 ORTHO05D005541 9.2e-104 380.9 320 60.9
SalBow7G3904 Salvia bowleyana HOM05D004681 ORTHO05D005541 3.5e-103 379.0 319 59.6
Eucgr.C00132 Eucalyptus grandis HOM05D004681 ORTHO05D005541 7.8e-103 377.9 323 61.6
Manes.14G161401 Manihot esculenta HOM05D004681 ORTHO05D005541 1.0e-102 377.5 323 60.7
QL12p032381 Quercus lobata HOM05D004681 ORTHO05D005541 1.3e-102 377.1 317 61.2
Manes.04G060300 Manihot esculenta HOM05D004681 ORTHO05D005541 3.0e-102 375.9 323 60.4
Sc14g0001370 Simmondsia chinensis HOM05D004681 ORTHO05D005541 5.1e-102 375.2 314 58.6
Solyc07g009320.3 Solanum lycopersicum HOM05D004681 ORTHO05D005541 5.1e-102 375.2 320 57.2
Actinidia22469 Actinidia chinensis HOM05D004681 ORTHO05D005541 6.6e-102 374.8 309 59.9
Hund09046 Selenicereus undatus HOM05D004681 ORTHO05D005541 6.6e-102 374.8 325 58.5
Sopen07g005070 Solanum pennellii HOM05D004681 ORTHO05D005541 8.6e-102 374.4 320 57.2
Dinv25404 Davidia involucrata HOM05D004681 ORTHO05D005541 1.1e-101 374.0 308 61.0
PGSC0003DMG400008514 Solanum tuberosum HOM05D004681 ORTHO05D005541 1.9e-101 373.2 320 56.9
Dinv26443 Davidia involucrata HOM05D004681 ORTHO05D005541 9.5e-101 370.9 289 64.4
Rhsim13G0200500 Rhododendron simsii HOM05D004681 ORTHO05D005541 2.1e-100 369.8 366 53.6
SGA_v2.0_scaffold41G15864 Striga asiatica HOM05D004681 ORTHO05D005541 4.0e-99 365.5 318 58.2
CiPaw.08G033800 Carya illinoinensis HOM05D004681 ORTHO05D005541 6.8e-99 364.8 316 59.8
ClCG06G013520 Citrullus lanatus HOM05D004681 ORTHO05D005541 1.2e-98 364.0 312 58.7
PGR044G2653 Punica granatum HOM05D004681 ORTHO05D005541 2.6e-98 362.8 315 59.0
RcHm_v2.0_Chr4g0400191 Rosa chinensis HOM05D004681 ORTHO05D005541 5.8e-98 361.7 311 58.2
MELO3C017439.2 Cucumis melo HOM05D004681 ORTHO05D005541 7.6e-98 361.3 316 59.2
Prupe.1G079200 Prunus persica HOM05D004681 ORTHO05D005541 1.3e-97 360.5 312 57.1
AUR62033246 Chenopodium quinoa HOM05D004681 ORTHO05D005541 2.9e-97 359.4 322 54.7
SalBow7G0268 Salvia bowleyana HOM05D004681 ORTHO05D005541 4.9e-97 358.6 336 54.8
MSTRG.10452 Avicennia marina HOM05D004681 ORTHO05D005541 8.3e-97 357.8 317 55.8
CAN.G1668.9 Capsicum annuum HOM05D004681 ORTHO05D005541 1.1e-96 357.5 319 54.9
Cc06_g22600 Coffea canephora HOM05D004681 ORTHO05D005541 7.1e-96 354.8 325 55.7
Peaxi162Scf00324g00718 Petunia axillaris HOM05D004681 ORTHO05D005541 1.2e-95 354.0 320 55.3
Nitab4.5_0010281g0010 Nicotiana tabacum HOM05D004681 ORTHO05D005541 1.6e-95 353.6 321 54.8
Ah.09g230170 Amaranthus hybridus HOM05D004681 ORTHO05D005541 2.1e-95 353.2 327 54.7
Oeu000976.1 Olea europaea HOM05D004681 ORTHO05D005541 2.7e-95 352.8 318 57.9
HanXRQChr09g0266261 Helianthus annuus HOM05D004681 ORTHO05D005541 1.0e-94 350.9 314 55.4
Potri.006G077100 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.1e-93 347.4 319 55.8
FAN22G1928 Fragaria x ananassa HOM05D004681 ORTHO05D005541 7.3e-93 344.7 314 55.4
FAN12G2798 Fragaria x ananassa HOM05D004681 ORTHO05D005541 1.2e-92 344.0 313 55.3
Aqoxy7G02735 Aquilegia oxysepala HOM05D004681 ORTHO05D005541 1.6e-92 343.6 326 56.1
CsaV3_1G031790 Cucumis sativus L. HOM05D004681 ORTHO05D005541 1.6e-92 343.6 317 57.4
FvH4_4g07590 Fragaria vesca HOM05D004681 ORTHO05D005541 2.1e-92 343.2 314 55.1
EL10Ac8g18317 Beta vulgaris HOM05D004681 ORTHO05D005541 1.4e-91 340.5 317 52.7
Potri.018G145508 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.4e-91 340.5 290 58.6
RcHm_v2.0_Chr7g0191541 Rosa chinensis HOM05D004681 ORTHO05D005541 1.8e-91 340.1 312 55.1
PSO079G0045 Papaver somniferum HOM05D004681 ORTHO05D005541 2.4e-91 339.7 324 54.6
MD13G1245600 Malus domestica HOM05D004681 ORTHO05D005541 4.0e-91 339.0 311 54.3
PSO423G0181 Papaver somniferum HOM05D004681 ORTHO05D005541 5.2e-91 338.6 328 54.3
Sabra06G0058400 Salix brachista HOM05D004681 ORTHO05D005541 8.9e-91 337.8 343 52.5
Nitab4.5_0000074g0040 Nicotiana tabacum HOM05D004681 ORTHO05D005541 5.8e-90 335.1 291 57.0
MBI13_g31546_MAGBIO Magnolia biondii HOM05D004681 ORTHO05D005541 9.9e-90 334.3 325 54.8
CANSAT11G1051 Cannabis sativa HOM05D004681 ORTHO05D005541 2.9e-89 332.8 314 53.8
unitig_578.g16069 Utricularia gibba HOM05D004681 ORTHO05D005541 6.4e-89 331.6 324 54.6
SGA_v2.0_scaffold21G09637 Striga asiatica HOM05D004681 ORTHO05D005541 8.4e-89 331.3 318 53.8
Lsat_1_v5_gn_4_183080 Lactuca sativa HOM05D004681 ORTHO05D005541 1.4e-88 330.5 316 53.2
Glyma.15G164000 Glycine max HOM05D004681 ORTHO05D005541 1.3e-86 323.9 321 51.7
CSS0025965 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 1.7e-86 323.6 306 53.6
CSS0001946 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 8.7e-86 321.2 229 64.2
Sed0004411 Sechium edule HOM05D004681 ORTHO05D005541 8.7e-86 321.2 253 61.3
FAN17G0253 Fragaria x ananassa HOM05D004681 ORTHO05D005541 1.1e-85 320.9 314 51.9
Migut.L01897 Erythranthe guttata HOM05D004681 ORTHO05D005541 1.9e-85 320.1 317 52.4
COL.COLO4_29315 Corchorus olitorius HOM05D004681 ORTHO05D005541 5.6e-85 318.5 317 55.2
VMungo1215G0406 Vigna mungo HOM05D004681 ORTHO05D005541 7.3e-85 318.2 307 52.1
Phvul.003G142900 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 1.8e-83 313.5 307 52.4
Glyma.09G057900 Glycine max HOM05D004681 ORTHO05D005541 6.9e-83 311.6 322 50.0
HanXRQChr10g0297571 Helianthus annuus HOM05D004681 ORTHO05D005541 4.4e-82 308.9 357 47.3
ECA232G3088 Erigeron canadensis HOM05D004681 ORTHO05D005541 7.6e-82 308.1 312 51.9
Lj7A127G13 Lonicera japonica HOM05D004681 ORTHO05D005541 2.9e-81 306.2 268 58.2
arahy.Tifrunner.gnm1.ann1.L4KBSE Arachis hypogaea HOM05D004681 ORTHO05D005541 4.9e-81 305.4 317 51.7
arahy.Tifrunner.gnm1.ann1.K04ERL Arachis hypogaea HOM05D004681 ORTHO05D005541 1.1e-80 304.3 317 51.4
HPP92_004723 Vanilla planifolia HOM05D004681 ORTHO05D005541 1.2e-79 300.8 325 50.8
Lalb_Chr15g0084091 Lupinus albus HOM05D004681 ORTHO05D005541 1.6e-79 300.4 322 49.1
Glyma.13G099400 Glycine max HOM05D004681 ORTHO05D005541 1.7e-78 297.0 308 50.0
Ca_21245_v3 Cicer arietinum L. HOM05D004410 ORTHO05D006134 3.9e-78 295.8 312 51.3
Medtr4g127630 Medicago truncatula HOM05D004681 ORTHO05D005541 8.7e-78 294.7 310 50.6
VMungo1309G2393 Vigna mungo HOM05D004681 ORTHO05D005541 3.3e-77 292.7 322 46.3
ATR0626G278 Amborella trichopoda HOM05D004681 ORTHO05D005541 9.6e-77 291.2 324 47.2
Psat0s736g0040 Pisum sativum HOM05D004681 ORTHO05D005541 2.1e-76 290.0 306 49.0
TPR.G5388 Trifolium pratense HOM05D004681 ORTHO05D005541 2.8e-76 289.7 306 49.3
Lj6g0005497 Lotus japonicus HOM05D004681 ORTHO05D005541 4.8e-76 288.9 317 47.9
AUR62021331 Chenopodium quinoa HOM05D004681 ORTHO05D005541 2.4e-75 286.6 322 47.5
Glyma.17G060700 Glycine max HOM05D004681 ORTHO05D005541 3.1e-75 286.2 309 48.5
Phvul.009G237800 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 4.5e-74 282.3 324 47.2
Lalb_Chr12g0199511 Lupinus albus HOM05D004681 ORTHO05D005541 1.3e-73 280.8 312 49.0
Os06g0168000 Oryza sativa ssp. japonica HOM05D004681 ORTHO05D005541 8.4e-73 278.1 319 45.8
arahy.Tifrunner.gnm1.ann1.KM341F Arachis hypogaea HOM05D004681 ORTHO05D005541 1.4e-72 277.3 330 44.8
Lj4g0016729 Lotus japonicus HOM05D004681 ORTHO05D005541 1.9e-72 276.9 315 47.0
Medtr2g036910 Medicago truncatula HOM05D004681 ORTHO05D005541 3.9e-70 269.2 313 45.4
arahy.Tifrunner.gnm1.ann1.LX7F61 Arachis hypogaea HOM05D004681 ORTHO05D005541 6.7e-70 268.5 322 43.8
Ca_02042_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 7.4e-69 265.0 311 45.7
DCAR_019823 Daucus carota HOM05D004410 ORTHO05D006134 7.4e-69 265.0 328 46.0
Nn2g12745 Nelumbo nucifera HOM05D004681 ORTHO05D005541 1.8e-67 260.4 321 47.4
SHI02877 Sapria himalayana HOM05D004681 ORTHO05D005541 6.9e-67 258.5 481 35.8
TPR.G9028 Trifolium pratense HOM05D004681 ORTHO05D005541 1.7e-65 253.8 323 44.3
HanXRQChr04g0105751 Helianthus annuus HOM05D004681 ORTHO05D005541 5.5e-64 248.8 186 60.2
Psat1g145840 Pisum sativum HOM05D004681 ORTHO05D005541 2.8e-60 236.5 215 52.1
vmacro23062 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 1.2e-58 231.1 272 46.7
Potri.018G147625 Populus trichocarpa HOM05D004681 ORTHO05D005541 2.9e-57 226.5 326 41.7
CDE06G1906 Ceratophyllum demersum HOM05D004681 ORTHO05D005541 8.4e-57 224.9 330 42.7
Pp3c12_12510 Physcomitrium patens HOM05D004681 ORTHO05D005541 3.2e-56 223.0 314 41.1
TAR636G1425 Trochodendron aralioides HOM05D004681 ORTHO05D005541 3.2e-56 223.0 223 56.5
Pp3c4_10660 Physcomitrium patens HOM05D004681 ORTHO05D005541 1.5e-53 214.2 326 38.0
Haze_21984 Corylus avellana HOM05D004681 ORTHO05D005541 2.0e-50 203.8 210 48.1
Zm00001eb375500 Zea mays HOM05D004681 ORTHO05D005541 1.4e-48 197.6 182 51.1
Mapoly0001s0301 Marchantia polymorpha HOM05D004681 ORTHO05D005541 2.5e-48 196.8 318 37.4
RcHm_v2.0_Chr7g0191431 Rosa chinensis HOM05D004681 ORTHO05D005541 2.5e-48 196.8 295 42.0
SMO358G0154 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 9.7e-45 184.9 321 37.4
AagrBONN_evm.TU.Sc2ySwM_228.4196 Anthoceros agrestis HOM05D004681 ORTHO05D005541 2.2e-44 183.7 316 34.8
SGA_v2.0_scaffold41G15854 Striga asiatica HOM05D004681 ORTHO05D005541 5.0e-41 172.6 240 45.4
CAN.G609.4 Capsicum annuum HOM05D004681 ORTHO05D005541 4.2e-40 169.5 142 52.8
Potri.001G065336 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.1e-29 134.8 113 59.3
Ca_02046_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 5.9e-26 122.5 220 36.8
CAN.G497.61 Capsicum annuum HOM05D004681 ORTHO05D005541 7.7e-26 122.1 117 49.6
SMO367G0296 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.5e-21 107.8 236 33.9
CBR_g39348 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-20 104.8 189 37.0
CAN.G266.1 Capsicum annuum HOM05D004681 ORTHO05D005541 7.0e-19 99.0 157 34.4
Potri.018G145080 Populus trichocarpa HOM05D004681 ORTHO05D005541 9.1e-19 98.6 164 42.1
vmacro04071 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 1.2e-18 98.2 105 56.2
Potri.001G064609 Populus trichocarpa HOM05D004681 ORTHO05D005541 3.5e-18 96.7 79 55.7
Haze_21988 Corylus avellana HOM05D004681 ORTHO05D005541 1.3e-17 94.7 119 51.3
Potri.001G065000 Populus trichocarpa HOM05D004681 ORTHO05D005541 3.6e-15 86.7 100 52.0
HanXRQChr04g0105741 Helianthus annuus HOM05D004681 ORTHO05D005541 1.4e-14 84.7 108 47.2
Haze_21985 Corylus avellana HOM05D004681 ORTHO05D005541 1.2e-13 81.6 128 44.5
QL05p087685 Quercus lobata HOM05D004681 ORTHO05D005541 5.7e-13 79.3 192 32.8
SMO230G0066 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 5.4e-11 72.8 224 28.6
Cre03.g177900 Chlamydomonas reinhardtii HOM05D004681 ORTHO05D005541 1.7e-09 67.8 306 25.2
SMO367G1182 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.7e-09 67.8 171 30.4
PRCOL_00000454 Prasinoderma coloniale HOM05D004681 ORTHO05D005541 5.2e-06 56.2 304 24.0


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